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glycoprotein
Euk-VirKern_Canyon_virus
glycoprotein__YP_009361993__Kern_Canyon_virus__380433
Identity
- Accession:
- YP_009361993 ↗
- Protein ID:
- glycoprotein
- Kingdom:
- euk
Quality
76.4
mean pLDDT
Taxonomy
Orthornavirae›
Negarnaviricota›
Monjiviricetes›
Mononegavirales›
Rhabdoviridae›
Ledantevirus›
Kern_Canyon_virus
TaxID: 380433
Cluster
View cluster (70 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 102-221
Domain cluster:
rep: putative_glycoprotein__YP_002905332__Nyavirus_midwayense__644609__D72-196
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00974.25 best | Rhabdo_glycop_FD | 121.0 | 4.20e-35 | 81.7% | 98.0% |
D2
high
residues 328-459
Domain cluster:
rep: glycoprotein__YP_010086563__Kwatta_virus__1272945__D21-47_334-461
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF24833.2 best | Rhabdo_glycop_CD | 71.2 | 1.20e-19 | 87.1% | 81.0% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4803436 | 4300.1.1.15 ↗ | beta complex topology › Viral glycoprotein ectodomain-like › Viral glycoprotein ectodomain-like › Viral glycoprotein ectodomain-like › Rhabdo_glycop_CD | 0.85 | 44.0 | 5.66e-01 | 84.1% | 85.0% |
| 3672714 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 22.0 | 3.07e-01 | 92.4% | 80.0% |
D3
medium
residues 76-98_222-327
Domain cluster:
rep: glycoprotein__YP_009305101__Wuhan_Louse_Fly_Virus_5__1608119__D70-87_212-294