glycoprotein

Euk-Vir

Barur_virus

glycoprotein__YP_009362158__Barur_virus__380438

Identity

76.1 mean pLDDT

Orthornavirae› Negarnaviricota› Monjiviricetes› Mononegavirales› Rhabdoviridae› Ledantevirus› Barur_virus

TaxID: 380438

View cluster (70 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 29-55_306-439

PDB

Domain cluster: rep: glycoprotein__YP_009666837__Vaprio_virus__2100727__D50-66_371-471

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF24833.2 best	Rhabdo_glycop_CD	80.2	2.00e-22	81.4%	76.9%

D2 high residues 83-196

PDB

Domain cluster: rep: putative_glycoprotein__YP_002905332__Nyavirus_midwayense__644609__D72-196

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00974.25 best	Rhabdo_glycop_FD	114.5	4.50e-33	86.0%	98.0%

D3 medium residues 56-82_199-305

PDB

Domain cluster: rep: glycoprotein__YP_009305101__Wuhan_Louse_Fly_Virus_5__1608119__D70-87_212-294

CATH (6)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4d6wA03	2.30.29.130	Mainly Beta › Roll › PH-domain like ›	0.79	55.0	6.46e-01	85.8%	100.0%
2cmzA03	2.30.29.130	Mainly Beta › Roll › PH-domain like ›	0.72	49.0	5.83e-01	85.8%	100.0%
4gs3A00	2.40.50.140	Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins	0.54	30.0	3.52e-01	83.6%	78.9%
1jkfA03	3.30.360.10	Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2	0.52	22.0	3.11e-01	97.0%	83.3%
3l50A00	3.40.20.10	Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin	0.52	31.0	3.09e-01	85.8%	55.1%
2veoA01	3.40.50.1820	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain	0.51	38.0	2.85e-01	98.5%	30.8%

ECOD (7)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3689291	220.1.1.69 ↗	beta barrels › PH domain-like › PH domain-like › PH domain-like › Meiotic_rec114	0.61	48.0	4.62e-01	82.8%	93.5%
3665028	252.1.1.0 ↗	a+b two layers › DNA-binding domain › Methyl-CpG-binding domain, MBD › Methyl-CpG-binding domain, MBD	0.57	27.0	3.27e-01	89.6%	65.6%
4593266	325.1.7.0 ↗	a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif	0.56	26.0	3.29e-01	76.9%	73.3%
4938400	220.1.1.219 ↗	beta barrels › PH domain-like › PH domain-like › PH domain-like › CheF-arch	0.56	42.0	4.53e-01	79.9%	97.4%
152653	2.1.1.6 ↗	beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB	0.54	30.0	3.52e-01	83.6%	78.9%
3437088	9.1.1.0 ↗	beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins	0.53	37.0	3.33e-01	72.4%	84.1%
3642325	9.1.1.29 ↗	beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › BFA1_C	0.52	36.0	3.51e-01	71.6%	87.6%