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glycoprotein
Euk-VirDrosophila_immigrans_sigmavirus
glycoprotein__YP_009505496__Drosophila_immigrans_sigmavirus__1002360
Identity
- Accession:
- YP_009505496 ↗
- Protein ID:
- glycoprotein
- Kingdom:
- euk
Quality
71.6
mean pLDDT
Taxonomy
Orthornavirae›
Negarnaviricota›
Monjiviricetes›
Mononegavirales›
Rhabdoviridae›
Sigmavirus›
Drosophila_immigrans_sigmavirus
TaxID: 1002360
Cluster
View cluster (70 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 25-49_283-416
Domain cluster:
rep: glycoprotein__YP_010086563__Kwatta_virus__1272945__D21-47_334-461
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF24833.2 best | Rhabdo_glycop_CD | 51.1 | 2.00e-13 | 76.1% | 69.4% |
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4d6wA01 | 2.30.30.640 | Mainly Beta › Roll › SH3 type barrels. › Rhabdovirus spike glycoprotein G, lateral domain | 0.83 | 42.0 | 5.63e-01 | 91.8% | 88.0% |
| 4d6wB02 | 6.10.140.740 | Special › Helix non-globular › Helix Hairpins › | 0.72 | 37.0 | 4.92e-01 | 96.2% | 89.1% |
D2
high
residues 52-64_192-271
Domain cluster:
rep: glycoprotein__YP_009305101__Wuhan_Louse_Fly_Virus_5__1608119__D70-87_212-294
D3
high
residues 69-185
Domain cluster:
rep: putative_glycoprotein__YP_002905332__Nyavirus_midwayense__644609__D72-196
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00974.25 best | Rhabdo_glycop_FD | 69.8 | 3.90e-19 | 85.5% | 99.0% |