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glycoprotein

Euk-Vir

Carajas_virus

glycoprotein__YP_009505530__Carajas_virus__239239

Identity

Accession:
YP_009505530 ↗
Protein ID:
glycoprotein
Kingdom:
euk

Quality

73.9 mean pLDDT

Taxonomy

Orthornavirae› Negarnaviricota› Monjiviricetes› Mononegavirales› Rhabdoviridae› Vesiculovirus› Carajas_virus

TaxID: 239239

Cluster

View cluster (70 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 23-53_308-439
PDB
Domain cluster: rep: glycoprotein__YP_010086563__Kwatta_virus__1272945__D21-47_334-461
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF24833.2 best Rhabdo_glycop_CD 98.3 4.90e-28 62.0% 76.9%
D2 high residues 78-190
PDB
Domain cluster: rep: putative_glycoprotein__YP_002905332__Nyavirus_midwayense__644609__D72-196
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00974.25 best Rhabdo_glycop_FD 112.2 2.30e-32 85.8% 96.9%
D3 medium residues 54-77_201-307
PDB
Domain cluster: rep: glycoprotein__YP_009305101__Wuhan_Louse_Fly_Virus_5__1608119__D70-87_212-294
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2cmzA03 2.30.29.130 Mainly Beta › Roll › PH-domain like › 0.90 63.0 7.44e-01 79.4% 100.0%
4d6wA03 2.30.29.130 Mainly Beta › Roll › PH-domain like › 0.82 58.0 6.82e-01 79.4% 100.0%
1z87A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.67 47.0 5.37e-01 72.5% 97.0%
3a58A01 2.30.29.90 Mainly Beta › Roll › PH-domain like › 0.61 46.0 4.16e-01 77.9% 78.2%
7csoA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.61 44.0 4.54e-01 75.6% 90.6%
1wjmA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 41.0 4.26e-01 73.3% 87.0%
3tfmA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 41.0 4.44e-01 73.3% 88.1%
1q67A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 41.0 4.05e-01 76.3% 95.0%
2dtcA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 39.0 4.17e-01 74.0% 94.0%
ECOD (10)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3624046 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.64 46.0 4.77e-01 73.3% 86.7%
3702239 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.64 47.0 4.67e-01 76.3% 95.6%
3275677 220.1.1.66 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH 0.62 45.0 4.23e-01 75.6% 78.8%
3263955 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.62 45.0 4.59e-01 75.6% 81.4%
3406906 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.60 43.0 4.60e-01 74.0% 89.6%
3553515 197.1.1.1 ↗ alpha bundles › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › FERM_M 0.59 44.0 3.36e-01 77.1% 69.2%
3705552 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.57 42.0 3.94e-01 77.1% 98.2%
4162584 220.1.1.67 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › EVH1_PP4R3 0.57 42.0 4.01e-01 77.9% 78.1%
3925496 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.57 37.0 4.32e-01 72.5% 94.4%
3243776 220.1.1.14 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › DM10_dom 0.53 37.0 4.01e-01 71.0% 96.4%