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glycoprotein
Euk-VirMerida-like_virus_KE-2017a
glycoprotein__YP_009551691__Merida-like_virus_KE-2017a__1969830
Identity
- Accession:
- YP_009551691 ↗
- Protein ID:
- glycoprotein
- Kingdom:
- euk
Quality
71.0
mean pLDDT
Taxonomy
Orthornavirae›
Negarnaviricota›
Monjiviricetes›
Mononegavirales›
Rhabdoviridae›
Merida-like_virus_KE-2017a
TaxID: 1969830
Cluster
View cluster (9 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 26-45_311-430
Domain cluster:
rep: glycoprotein__YP_010086563__Kwatta_virus__1272945__D21-47_334-461
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF24833.2 best | Rhabdo_glycop_CD | 48.4 | 1.40e-12 | 65.7% | 71.1% |
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4d6wA01 | 2.30.30.640 | Mainly Beta › Roll › SH3 type barrels. › Rhabdovirus spike glycoprotein G, lateral domain | 0.79 | 50.0 | 6.13e-01 | 85.7% | 97.8% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3182080 | 206.1.1.2 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase,Pkinase_C | 0.54 | 44.0 | 3.06e-01 | 87.1% | 76.0% |
| None | — | 0.53 | 43.0 | 3.01e-01 | 87.1% | 78.9% | |
| 3562086 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.50 | 42.0 | 3.02e-01 | 91.4% | 74.0% |
D2
high
residues 76-200
Domain cluster:
rep: putative_glycoprotein__YP_002905332__Nyavirus_midwayense__644609__D72-196
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00974.25 best | Rhabdo_glycop_FD | 72.5 | 5.80e-20 | 80.0% | 99.0% |
D3
medium
residues 46-74_202-310