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glycoprotein
Euk-VirWuchang_Cockroach_Virus_3
glycoprotein__YP_009666257__Wuchang_Cockroach_Virus_3__1608099
Identity
- Accession:
- YP_009666257 ↗
- Protein ID:
- glycoprotein
- Kingdom:
- euk
Quality
72.3
mean pLDDT
Taxonomy
Orthornavirae›
Negarnaviricota›
Monjiviricetes›
Jingchuvirales›
Chuviridae›
Scarabeuvirus›
Wuchang_Cockroach_Virus_3
TaxID: 1608099
Cluster
View cluster (20 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 66-215
Domain cluster:
rep: putative_glycoprotein__YP_002905332__Nyavirus_midwayense__644609__D72-196
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF24664.2 best | Monjiviricetes_fusion | 143.4 | 9.40e-42 | 100.0% | 22.6% |
D2
medium
residues 30-64_225-296_369-389
Domain cluster:
rep: glycoprotein__YP_009177723__Wuhan_tick_virus_2__1608138__D23-71_226-303_364-401
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF24664.2 best | Monjiviricetes_fusion | 49.1 | 3.40e-13 | 57.8% | 10.4% |
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1v5mA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.58 | 40.0 | 3.99e-01 | 70.3% | 80.1% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 946 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.63 | 44.0 | 4.18e-01 | 70.3% | 67.3% |
| 4023588 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.63 | 43.0 | 3.83e-01 | 70.3% | 68.1% |
| 3824446 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.61 | 42.0 | 4.15e-01 | 71.1% | 97.1% |
| 3784777 | 220.1.1.32 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Sec3-PIP2_bind | 0.59 | 41.0 | 3.79e-01 | 71.1% | 62.4% |
| 3867284 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.55 | 47.0 | 3.19e-01 | 96.1% | 67.9% |
| 3714509 | 220.1.1.303 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PF26278 | 0.54 | 37.0 | 3.49e-01 | 70.3% | 58.1% |