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glycoprotein

Euk-Vir

Guertu_virus

glycoprotein__YP_009666938__Guertu_virus__1763596

Identity

Accession:
YP_009666938 ↗
Protein ID:
glycoprotein
Kingdom:
euk

Quality

66.0 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 349-431
PDB
D2 high residues 639-710
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF07245.17 best Phlebovirus_G2 46.3 4.10e-12 100.0% 20.4%
D3 high residues 897-987
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF19019.7 best Phlebo_G2_C 42.2 1.00e-10 93.4% 49.7%
D4 medium residues 47-128
PDB
D5 medium residues 164-246_309-335
PDB
D6 medium residues 588-620_733-766
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3i3lA02 3.30.390.160 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › 0.52 41.0 3.53e-01 92.5% 77.6%
3wqbA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.51 41.0 3.10e-01 89.6% 91.0%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3704531 10.15.1.1 beta sandwiches › jelly-roll › Smp-1-like › Smp-1-like › DUF1935 0.56 43.0 3.59e-01 83.6% 75.8%
3582195 12.3.1.18 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydr_116N 0.53 41.0 2.94e-01 92.5% 49.8%
4223833 79.1.1.13 beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Gp5_trimer_C 0.52 31.0 2.35e-01 71.6% 24.1%
5004624 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 40.0 3.66e-01 88.1% 88.4%
D7 medium residues 621-638_718-732_767-896
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF07245.17 best Phlebovirus_G2 35.9 6.20e-09 66.9% 26.6%