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glycoprotein

Euk-Vir

Bozo_virus

glycoprotein__YP_009666998__Bozo_virus__273349

Identity

Accession:: YP_009666998 ↗
Protein ID:: glycoprotein
Kingdom:: euk

Quality

77.1 mean pLDDT

Taxonomy

Orthornavirae› Negarnaviricota› Bunyaviricetes› Elliovirales› Peribunyaviridae› Orthobunyavirus› Bozo_virus

TaxID: 273349

Cluster

View cluster (42 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 568-605_624-713

PDB

Domain cluster: rep: M_polyprotein__YP_009666885__Jamestown_Canyon_virus__35511__D547-717

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03557.22 best	Bunya_G1	55.5	4.90e-15	99.2%	16.4%

D2 medium residues 727-820

PDB

Domain cluster: rep: polyprotein__YP_009117085__Maprik_virus__1590836__D700-782

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03557.22 best	Bunya_G1	60.9	1.10e-16	100.0%	10.4%

CATH (6)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1fiwA02	2.40.10.10	Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases	0.62	35.0	3.23e-01	83.0%	41.7%
1a5iA02	2.40.10.10	Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases	0.61	34.0	3.21e-01	83.0%	42.4%
4h4nA00	2.60.40.3750	Mainly Beta › Sandwich › Immunoglobulin-like ›	0.55	32.0	3.73e-01	96.8%	85.5%
1c8zA00	3.20.90.10	Alpha Beta › Alpha-Beta Barrel › Tubby Protein; Chain A › Tubby Protein; Chain A	0.52	37.0	2.72e-01	73.4%	90.9%
2xzlA02	2.40.30.230	Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 ›	0.52	39.0	4.14e-01	100.0%	96.2%
4bi3A01	3.90.1720.80	Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) ›	0.51	32.0	3.29e-01	100.0%	63.7%

ECOD (5)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
185779	3566.1.1.1 ↗	beta sandwiches › hypothetical protein BA_2335 › hypothetical protein BA_2335 › hypothetical protein BA_2335 › BA_2335-like	0.55	32.0	3.73e-01	96.8%	85.5%
3247934	1.1.7.41 ↗	beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › UPF1_1B_dom	0.54	46.0	4.60e-01	100.0%	90.5%
3252755	10.2.1.0 ↗	beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins)	0.53	38.0	3.44e-01	100.0%	53.8%
3388311	1.1.7.100 ↗	beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PGBA_N	0.52	43.0	4.57e-01	100.0%	98.8%
4042035	1.1.8.7 ↗	beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › YgfZ_barrel	0.51	33.0	3.38e-01	94.7%	69.7%

D3 medium residues 835-905

PDB

Domain cluster: rep: polyprotein__YP_008709777__Murrumbidgee_virus__1406134__D787-850

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03557.22 best	Bunya_G1	51.8	6.40e-14	100.0%	8.0%

D4 medium residues 1045-1086_1179-1200

PDB

Domain cluster: rep: polyprotein,_partial__YP_009512922__Tete_orthobunyavirus__35319__D1042-1078_1185-1197

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03557.22 best	Bunya_G1	96.1	2.50e-27	67.2%	5.0%
PF03557.22	Bunya_G1	33.7	1.90e-08	37.5%	2.6%

D5 medium residues 1087-1149_1207-1233

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03557.22 best	Bunya_G1	61.5	7.10e-17	74.4%	7.3%

CATH (4)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4i1sB00	4.10.80.340	Few Secondary Structures › Irregular › Rhinovirus 14, subunit 4 ›	0.63	26.0	3.31e-01	95.6%	63.5%
5ccbA01	3.10.330.20	Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 ›	0.54	29.0	3.24e-01	93.3%	65.3%
2jqjA01	2.60.200.20	Mainly Beta › Sandwich › Tumour Suppressor Smad4 ›	0.53	36.0	3.22e-01	92.2%	49.2%
5eqjB01	3.10.330.20	Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 ›	0.53	29.0	3.17e-01	93.3%	64.8%

ECOD (6)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5047456	284.1.1.9 ↗	a+b two layers › FKBP-like › FKBP-like › FKBP-like › TrmI-like_N	0.57	29.0	3.35e-01	92.2%	66.7%
3581307	382.1.1.0 ↗	few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like	0.56	30.0	3.39e-01	91.1%	65.7%
5059852	375.1.2.0 ↗	few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Desulforedoxin	0.55	26.0	3.54e-01	87.8%	100.0%
3567966	9.1.1.1 ↗	beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin	0.54	30.0	3.04e-01	93.3%	50.5%
2507226	264.2.1.0 ↗	beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain	0.52	28.0	3.18e-01	96.7%	69.2%
4026917	252.2.1.1 ↗	a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › AP2	0.51	22.0	2.80e-01	92.2%	62.0%

D6 medium residues 1234-1338

PDB

Domain cluster: rep: glycoprotein_precursor__YP_009664619__Gouleako_virus__603003__D815-896

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03557.22 best	Bunya_G1	105.2	4.60e-30	100.0%	11.9%

D7 medium residues 1372-1432

PDB

Domain cluster: representative