glycoprotein

Euk-Vir

Physostegia_chlorotic_mottle_virus

glycoprotein__YP_010086601__Physostegia_chlorotic_mottle_virus__1905830

Identity

64.0 mean pLDDT

Orthornavirae› Negarnaviricota› Monjiviricetes› Mononegavirales› Rhabdoviridae› Alphanucleorhabdovirus› Physostegia_chlorotic_mottle_virus

TaxID: 1905830

View cluster (5 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 124-133_276-339

PDB

D2 high residues 142-264

PDB

Domain cluster: rep: glycoprotein__YP_010086816__Wheat_yellow_striate_virus__2152660__D148-272

CATH (5)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3le4A00	2.20.70.10	Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; ›	0.69	21.0	3.16e-01	100.0%	56.4%
2yshA01	2.20.70.10	Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; ›	0.67	22.0	3.63e-01	95.1%	97.0%
2kxqA01	2.20.70.10	Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; ›	0.64	20.0	3.24e-01	100.0%	96.7%
3gtyX02	3.10.50.30	Alpha Beta › Roll › Chitinase A; domain 3 › Transcription elongation factor, GreA/GreB, C-terminal domain	0.62	36.0	4.20e-01	80.5%	82.1%
2jrbA00	3.30.250.20	Alpha Beta › 2-Layer Sandwich › Rec A Protein; domain 2 › L1 transposable element, C-terminal domain	0.51	23.0	3.06e-01	100.0%	78.5%

ECOD (3)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1503409	220.3.1.1 ↗	beta barrels › PH domain-like › first barrel domain in viral glycoproteins › first barrel domain in viral glycoproteins › Rhabdo_glycop	0.60	51.0	5.03e-01	100.0%	85.6%
3380380	375.1.1.0 ↗	few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related	0.57	19.0	3.32e-01	89.4%	100.0%
2124211	220.3.1.2 ↗	beta barrels › PH domain-like › first barrel domain in viral glycoproteins › first barrel domain in viral glycoproteins › Baculo_gp64	0.52	47.0	4.32e-01	100.0%	92.5%