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glycoprotein_precursor

Euk-Vir

Chapare_mammarenavirus

glycoprotein_precursor__YP_001816782__Chapare_mammarenavirus__499556

Identity

Accession:
YP_001816782 ↗
Protein ID:
glycoprotein_precursor
Kingdom:
euk

Quality

62.4 mean pLDDT

Taxonomy

Orthornavirae› Negarnaviricota› Bunyaviricetes› Hareavirales› Arenaviridae› Mammarenavirus› Mammarenavirus_chapareense

TaxID: 499556

Cluster

View cluster (22 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 79-239
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3wa5B00 2.60.120.1690 Mainly Beta › Sandwich › Jelly Rolls › 0.58 37.0 4.16e-01 96.3% 82.3%
1b24A01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.52 31.0 3.79e-01 91.9% 97.9%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2085444 3081.1.1.0 ↗ a+b complex topology › Envelope glycoprotein GP1 › Envelope glycoprotein GP1 › Envelope glycoprotein GP1 0.84 71.0 7.59e-01 92.5% 100.0%
2393530 3081.1.1.0 ↗ a+b complex topology › Envelope glycoprotein GP1 › Envelope glycoprotein GP1 › Envelope glycoprotein GP1 0.83 71.0 7.43e-01 92.5% 97.3%
1108141 881.1.1.12 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › Tsi3 0.71 38.0 4.25e-01 87.6% 66.7%
3291529 881.1.1.0 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.55 35.0 4.22e-01 98.8% 97.2%
1286181 881.1.1.7 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › DUF3805 0.52 35.0 3.82e-01 96.9% 80.9%
4024840 319.1.1.3 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS 0.51 38.0 4.13e-01 77.0% 91.1%