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glycoprotein_precursor

Euk-Vir

Huangpi_Tick_Virus_2

glycoprotein_precursor__YP_009293591__Huangpi_Tick_Virus_2__1608048

Identity

Accession:
YP_009293591 ↗
Protein ID:
glycoprotein_precursor
Kingdom:
euk

Quality

72.9 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 856-944
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF19019.7 best Phlebo_G2_C 32.1 1.20e-07 100.0% 50.3%
D2 medium residues 56-78_80-163
PDB
D3 medium residues 164-203_259-287_522-581_690-717_835-851
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2xi9B01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 27.0 3.35e-01 93.1% 75.7%
3kflA02 2.170.220.10 Mainly Beta › Beta Complex › Methionyl-trna Synthetase; domain 2 › 0.51 29.0 3.34e-01 86.2% 76.9%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4133516 10.1.1.26 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_32C 0.53 32.0 3.69e-01 96.6% 81.2%
D4 medium residues 296-394
PDB
D5 medium residues 596-672_743-804
PDB
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF07245.17 best Phlebovirus_G2 55.0 9.30e-15 56.8% 22.0%
PF07245.17 Phlebovirus_G2 25.9 6.60e-06 48.9% 18.0%