glycoprotein_precursor

Euk-Vir

Zucchini_lethal_chlorosis_virus

glycoprotein_precursor__YP_009315931__Zucchini_lethal_chlorosis_virus__83872

Identity

66.9 mean pLDDT

Orthornavirae› Negarnaviricota› Bunyaviricetes› Elliovirales› Tospoviridae› Orthotospovirus› Zucchini_lethal_chlorosis_virus

TaxID: 83872

View cluster (20 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 611-667_755-795_903-915

PDB

Domain cluster: rep: glycoprotein_precursor__YP_009505328__Badu_phasivirus__1980609__D739-805_894-940_1051-1072

D2 medium residues 114-304

PDB

D3 medium residues 337-410_434-460

PDB

Domain cluster: rep: envelope_glycoprotein__YP_009505546__Watermelon_bud_necrosis_virus__76052__D293-426

D4 medium residues 473-594

PDB

D5 medium residues 668-681_743-754_796-842_869-896

PDB

Domain cluster: rep: Gn_Gc__YP_009346016__Melon_severe_mosaic_tospovirus__485724__D732-748_792-831_865-887

D6 medium residues 682-742_843-868

PDB

Domain cluster: rep: glycoprotein_precursor__YP_009551599__Avalon_virus__1810950__D843-903_1047-1069

CATH (4)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2c9aA02	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.57	35.0	3.38e-01	70.1%	53.6%
1b7yB06	3.30.70.380	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ferrodoxin-fold anticodon-binding domain	0.53	36.0	3.64e-01	70.1%	74.4%
3votB02	3.30.470.20	Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain	0.53	37.0	2.67e-01	74.7%	62.8%
4illB01	2.40.30.310	Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 ›	0.50	35.0	3.23e-01	72.4%	96.6%

ECOD (3)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3858888	2003.1.5.81 ↗	a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25	0.56	41.0	3.02e-01	78.2%	32.8%
4649282	2003.1.5.66 ↗	a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11	0.56	41.0	2.99e-01	78.2%	30.8%
3600053	2003.1.5.0 ↗	a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases	0.54	37.0	2.82e-01	72.4%	83.4%

D7 medium residues 925-1015

PDB

Domain cluster: rep: glycoprotein_precursor__YP_010086063__Alstroemeria_necrotic_streak_virus__693450__D943-1015

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03557.22 best	Bunya_G1	35.2	6.50e-09	79.1%	7.6%