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glycoprotein_precursor

Euk-Vir

Patois_virus

glycoprotein_precursor__YP_009667043__Patois_virus__35318

Identity

Accession:: YP_009667043 ↗
Protein ID:: glycoprotein_precursor
Kingdom:: euk

Quality

73.0 mean pLDDT

Taxonomy

Orthornavirae› Negarnaviricota› Bunyaviricetes› Elliovirales› Peribunyaviridae› Orthobunyavirus› Patois_virus

TaxID: 35318

Cluster

View cluster (42 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 749-829

PDB

Domain cluster: rep: polyprotein__YP_009117085__Maprik_virus__1590836__D700-782

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03557.22 best	Bunya_G1	31.7	7.60e-08	100.0%	9.4%

CATH (6)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2mhgA00	2.20.130.30	Mainly Beta › Single Sheet › S-adenosyl-L-methionine-dependent methyltransferases › Protein of unknown function DUF2782	0.60	34.0	3.56e-01	86.4%	58.7%
3kyfA01	2.30.110.10	Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A	0.55	38.0	3.39e-01	97.5%	50.9%
3hrzC01	2.20.210.20	Mainly Beta › Single Sheet › ubp-family deubiquitinating enzyme fold ›	0.54	32.0	3.77e-01	96.3%	93.9%
2b39A10	2.60.120.1540	Mainly Beta › Sandwich › Jelly Rolls ›	0.54	31.0	2.81e-01	96.3%	39.7%
2qf4A02	2.40.10.350	Mainly Beta › Beta Barrel › Thrombin, subunit H › Rod shape-determining protein MreC, domain 2	0.51	33.0	3.23e-01	100.0%	58.2%
2derA03	2.40.30.10	Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors	0.50	31.0	3.12e-01	95.1%	57.5%

ECOD (12)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4011604	4.1.1.13 ↗	beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd	0.62	41.0	4.28e-01	95.1%	73.3%
4559371	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.57	38.0	4.16e-01	96.3%	88.9%
3687870	66.1.1.1 ↗	beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske	0.55	44.0	3.87e-01	86.4%	87.5%
5000741	4.17.1.1 ↗	beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N	0.55	35.0	3.81e-01	95.1%	80.0%
3492557	4.1.1.219 ↗	beta barrels › SH3 › SH3 › SH3 › LSM12_LSM	0.54	37.0	3.55e-01	95.1%	59.0%
5047239	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.54	36.0	3.85e-01	97.5%	85.9%
4298930	1.1.8.5 ↗	beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C	0.53	33.0	3.27e-01	97.5%	56.7%
3740753	4.1.1.3 ↗	beta barrels › SH3 › SH3 › SH3 › KOW	0.52	32.0	3.43e-01	93.8%	73.8%
3586487	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.51	31.0	3.14e-01	93.8%	56.5%
3900017	4.1.1.284 ↗	beta barrels › SH3 › SH3 › SH3 › SBNO	0.50	39.0	3.47e-01	100.0%	57.5%
4027577	220.1.1.0 ↗	beta barrels › PH domain-like › PH domain-like › PH domain-like	0.50	42.0	3.74e-01	97.5%	76.8%
4931409	220.1.1.0 ↗	beta barrels › PH domain-like › PH domain-like › PH domain-like	0.50	43.0	3.75e-01	100.0%	81.5%

D2 high residues 838-913

PDB

Domain cluster: rep: polyprotein__YP_008400137__Brazoran_virus__1368616__D843-910

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03557.22 best	Bunya_G1	41.4	8.90e-11	100.0%	8.0%

D3 medium residues 376-429_451-487

PDB

D4 medium residues 582-728

PDB

Domain cluster: rep: M_polyprotein__YP_009666885__Jamestown_Canyon_virus__35511__D547-717

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03557.22 best	Bunya_G1	54.1	1.30e-14	99.3%	14.3%

CATH (4)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1rj1A00	1.20.140.40	Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Invertase/pectin methylesterase inhibitor family protein	0.57	42.0	4.21e-01	74.8%	98.6%
2q00B00	1.20.120.330	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2	0.54	35.0	3.75e-01	80.3%	76.2%
4aqnA02	1.10.530.40	Mainly Alpha › Orthogonal Bundle › Lysozyme ›	0.53	40.0	3.65e-01	78.2%	100.0%
5dicA00	1.10.238.20	Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain	0.51	37.0	4.05e-01	73.5%	99.1%

ECOD (3)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2504457	7069.1.1.1 ↗	alpha complex topology › Head domain of SBV glycoprotein Gc › Head domain of SBV glycoprotein Gc › Head domain of SBV glycoprotein Gc › Bunya_G1	0.90	78.0	6.60e-01	91.2%	59.3%
2504456	7069.1.1.1 ↗	alpha complex topology › Head domain of SBV glycoprotein Gc › Head domain of SBV glycoprotein Gc › Head domain of SBV glycoprotein Gc › Bunya_G1	0.86	82.0	6.74e-01	100.0%	60.2%
2504455	7069.1.1.1 ↗	alpha complex topology › Head domain of SBV glycoprotein Gc › Head domain of SBV glycoprotein Gc › Head domain of SBV glycoprotein Gc › Bunya_G1	0.83	78.0	6.50e-01	99.3%	61.3%

D5 medium residues 947-1017_1234-1250

PDB

Domain cluster: rep: polyprotein__YP_009507860__Lukuni_virus__1678227__D919-985

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03557.22 best	Bunya_G1	75.4	4.80e-21	81.8%	8.0%

D6 medium residues 1018-1124_1139-1233

PDB

Domain cluster: rep: polyprotein__YP_009507882__Kairi_virus__80939__D1016-1096_1138-1232

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03557.22 best	Bunya_G1	283.8	4.70e-84	99.0%	24.4%

D7 medium residues 1366-1419

PDB