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gp142

Euk-Vir

Caviid_betaherpesvirus_2

gp142__YP_007417892__Caviid_betaherpesvirus_2__33706

Identity

Accession:: YP_007417892 ↗
Protein ID:: gp142
Kingdom:: euk

Quality

60.2 mean pLDDT

Taxonomy

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Quwivirus› Caviid_betaherpesvirus_2

TaxID: 33706

Cluster

View cluster (59 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-84_114-158

PDB

Domain cluster: rep: protein_U95__YP_073826__Human_betaherpesvirus_7__10372__D619-769

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02393.22 best	US22	46.7	4.50e-12	89.0%	90.3%

CATH (6)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3ffvA00	3.40.1580.20	Alpha Beta › 3-Layer(aba) Sandwich › SMI1/KNR4-like › Syd protein	0.56	47.0	4.19e-01	92.1%	93.9%
2i4lB02	3.40.50.800	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain	0.53	34.0	3.73e-01	86.6%	81.2%
3le4A00	2.20.70.10	Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; ›	0.52	23.0	3.42e-01	99.2%	96.4%
3pqhA01	2.20.220.20	Mainly Beta › Single Sheet › Glycosyl hydrolase fold ›	0.52	23.0	3.20e-01	75.6%	85.0%
4ozuA01	2.130.10.10	Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase	0.52	41.0	2.99e-01	85.0%	65.4%
1pguA02	2.130.10.10	Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase	0.51	44.0	3.27e-01	94.5%	99.4%

ECOD (13)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3427055	5.1.11.13 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › Beta-prop_RIC1_2nd	0.56	46.0	2.84e-01	88.2%	51.7%
3533928	5.1.4.171 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › HELP+Beta-prop_EML	0.53	46.0	3.32e-01	94.5%	89.4%
3421682	5.1.3.0 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed	0.52	46.0	3.33e-01	93.7%	91.3%
3666904	5.1.3.142 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like	0.52	47.0	3.40e-01	95.3%	93.2%
4588425	5.1.4.1 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40	0.52	43.0	3.11e-01	89.0%	82.5%
3595710	5.1.4.1 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40	0.52	43.0	2.91e-01	88.2%	40.0%
3380688	5.1.3.67 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1	0.51	46.0	3.46e-01	96.1%	96.2%
3594123	5.1.4.0 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed	0.51	41.0	3.10e-01	85.8%	100.0%
3594793	5.1.4.0 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed	0.51	40.0	2.98e-01	83.5%	52.7%
3461790	5.1.3.118 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3	0.51	46.0	3.38e-01	97.6%	84.4%
3845022	5.1.11.11 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › WD40	0.51	40.0	2.56e-01	83.5%	21.2%
3211395	5.1.4.102 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40_3	0.50	39.0	2.90e-01	80.3%	49.5%
3434838	5.1.3.67 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1	0.50	45.0	3.32e-01	96.1%	94.6%

D2 high residues 180-281_306-368

PDB

Domain cluster: rep: gp3__YP_007417792__Caviid_betaherpesvirus_2__33706__D377-544

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02393.22 best	US22	41.2	2.30e-10	76.4%	66.1%