←Back to structures

gp143

Euk-Vir

Caviid_betaherpesvirus_2

gp143__YP_007417893__Caviid_betaherpesvirus_2__33706

Identity

Accession:
YP_007417893 ↗
Protein ID:
gp143
Kingdom:
euk

Quality

57.9 mean pLDDT

Taxonomy

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Quwivirus› Caviid_betaherpesvirus_2

TaxID: 33706

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 120-259
PDB
Domain cluster: rep: protein_U95__YP_073826__Human_betaherpesvirus_7__10372__D619-769
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02393.22 best US22 69.7 3.40e-19 82.9% 95.2%
D2 medium residues 268-413
PDB
Domain cluster: rep: US22_family_homolog__YP_214055__Murid_betaherpesvirus_1__10366__D433-537
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4eqaC00 2.40.128.650 Mainly Beta › Beta Barrel › Lipocalin › 0.62 43.0 4.30e-01 71.2% 100.0%
4fw1A02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.61 22.0 3.66e-01 84.9% 90.7%
2yztA00 3.30.160.250 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.58 21.0 3.02e-01 70.5% 68.2%
6bhdA03 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.57 23.0 3.37e-01 90.4% 84.1%
5m8cB01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.56 40.0 3.05e-01 73.3% 60.9%
3c5mA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.54 42.0 3.09e-01 81.5% 75.8%
3hrpA02 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.52 45.0 3.55e-01 93.2% 98.4%
3dlbB03 2.170.260.50 Mainly Beta › Beta Complex › paz domain › 0.52 30.0 3.75e-01 89.0% 96.6%
3mmyA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 45.0 3.42e-01 95.9% 92.9%
3pqhA01 2.20.220.20 Mainly Beta › Single Sheet › Glycosyl hydrolase fold › 0.51 23.0 3.33e-01 89.7% 98.3%
4chjA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 31.0 3.38e-01 90.4% 71.0%
1nr0A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 46.0 3.66e-01 100.0% 92.6%
ECOD (21)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1114686 4.1.1.8 ↗ beta barrels › SH3 › SH3 › SH3 › IN_DBD_C 0.61 22.0 3.58e-01 71.2% 85.7%
3427055 5.1.11.13 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › Beta-prop_RIC1_2nd 0.55 47.0 2.98e-01 91.8% 48.9%
3305160 5.1.5.185 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_RIC1_2nd 0.55 47.0 2.95e-01 91.8% 49.1%
3995338 10.1.1.17 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.54 38.0 3.76e-01 98.6% 68.4%
3605293 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.53 45.0 3.25e-01 91.8% 68.3%
3935890 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.52 46.0 3.54e-01 95.9% 97.6%
4014408 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.52 44.0 3.34e-01 92.5% 94.2%
3180082 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.52 45.0 3.44e-01 95.9% 91.1%
3761115 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.51 44.0 3.17e-01 93.2% 97.4%
3666904 5.1.3.142 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like 0.51 44.0 3.43e-01 93.2% 94.2%
3491878 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.51 45.0 3.38e-01 95.9% 90.1%
3999383 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.51 45.0 3.47e-01 95.9% 95.5%
3912572 5.1.5.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DPPIV_N,DPPIV_rep 0.51 42.0 2.92e-01 87.7% 37.1%
3811138 5.1.3.118 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.51 40.0 3.33e-01 81.5% 63.4%
3464481 5.1.3.142 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like 0.51 44.0 3.26e-01 93.2% 95.5%
3390512 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.51 43.0 3.36e-01 92.5% 95.2%
3466257 5.1.3.142 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like 0.51 44.0 3.33e-01 93.2% 95.4%
3573545 5.1.4.312 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, WD40_WDHD1_1st 0.51 45.0 3.48e-01 95.9% 94.0%
3800252 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.51 44.0 2.97e-01 93.8% 94.3%
3596935 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.50 45.0 3.46e-01 97.3% 84.3%
3223991 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.50 43.0 3.38e-01 92.5% 98.7%