gp144

Euk-Vir

Caviid_betaherpesvirus_2

gp144__YP_007417894__Caviid_betaherpesvirus_2__33706

Identity

58.4 mean pLDDT

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Quwivirus› Caviid_betaherpesvirus_2

TaxID: 33706

Singleton — not in a non-trivial cluster

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 13-157_343-363

PDB

Domain cluster: rep: e141__YP_007016528__Murid_betaherpesvirus_8__1261657__D1-155_323-396

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02393.22 best	US22	71.7	8.50e-20	75.3%	99.2%

D2 medium residues 162-188_269-342

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02393.22 best	US22	36.2	8.20e-09	61.4%	37.1%

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5cq2A02	2.20.70.10	Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; ›	0.62	27.0	4.00e-01	84.2%	95.3%
6whjD00	3.40.1190.20	Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase	0.51	35.0	2.54e-01	72.3%	90.6%

ECOD (5)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3354326	386.1.1.4 ↗	few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-BED	0.61	29.0	3.62e-01	71.3%	73.3%
3389477	4205.1.1.0 ↗	a+b two layers › SMI1/KNR4-like › SMI1/KNR4-like › SMI1/KNR4-like	0.59	42.0	3.40e-01	72.3%	88.6%
3823898	386.1.1.0 ↗	few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers	0.59	30.0	3.76e-01	71.3%	85.5%
3782747	216.1.1.0 ↗	a+b two layers › UBC-like › UBC-like › UBC-like	0.54	29.0	3.21e-01	76.2%	65.0%
3480502	5.1.4.0 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed	0.53	39.0	2.46e-01	79.2%	41.9%

D3 medium residues 189-268

PDB

Domain cluster: representative

CATH (4)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5zr6A01	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.58	33.0	3.77e-01	71.2%	76.3%
3tw6D02	3.10.600.10	Alpha Beta › Roll › pyruvate carboxylase f1077a mutant fold › pyruvate carboxylase f1077a mutant domain	0.55	33.0	3.44e-01	92.5%	63.2%
2js3A01	1.10.287.780	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ITPase-like domains	0.54	28.0	2.94e-01	91.3%	51.3%
1wmxA00	2.60.120.430	Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin	0.50	40.0	3.20e-01	88.7%	89.6%

ECOD (7)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3301383	4.1.1.141 ↗	beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor	0.67	33.0	4.06e-01	82.5%	76.0%
3810217	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.63	31.0	3.80e-01	82.5%	74.0%
3828749	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.61	34.0	3.56e-01	88.7%	57.3%
3531764	1170.1.1.1 ↗	beta barrels › IL8-related › IL8-related › IL8 › IL8	0.51	29.0	3.01e-01	88.7%	56.0%
4800173	2006.1.1.56 ↗	a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase, Cation_ATPase	0.51	35.0	3.73e-01	75.0%	86.6%
1166	10.32.1.80 ↗	beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM30	0.50	40.0	3.20e-01	88.7%	89.6%
3929671	7579.1.1.47 ↗	a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › BD-FAE	0.50	35.0	2.43e-01	71.2%	40.4%