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gp145

Euk-Vir

Caviid_betaherpesvirus_2

gp145__YP_007417895__Caviid_betaherpesvirus_2__33706

Identity

Accession:
YP_007417895 ↗
Protein ID:
gp145
Kingdom:
euk

Quality

59.7 mean pLDDT

Taxonomy

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Quwivirus› Caviid_betaherpesvirus_2

TaxID: 33706

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 354-522
PDB
Domain cluster: rep: protein_U95__YP_073826__Human_betaherpesvirus_7__10372__D619-769
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02393.22 best US22 35.3 1.50e-08 78.1% 91.1%
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4fw1A02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.58 20.0 3.34e-01 72.2% 90.7%
2ogqA01 3.30.1120.30 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain 0.55 30.0 3.35e-01 74.0% 65.9%
3pqhA01 2.20.220.20 Mainly Beta › Single Sheet › Glycosyl hydrolase fold › 0.53 20.0 3.05e-01 82.2% 86.7%
1k32A02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 37.0 2.92e-01 73.4% 58.9%
2jxwA00 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.51 22.0 3.15e-01 76.9% 86.7%
1a2pA00 3.10.450.30 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Microbial ribonucleases 0.51 33.0 3.94e-01 76.3% 100.0%
4h5iB00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.50 42.0 3.37e-01 91.1% 98.3%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3592541 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 21.0 2.92e-01 75.1% 70.0%
3484105 5.1.2.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.52 39.0 4.13e-01 76.9% 95.3%
3596935 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.51 41.0 3.34e-01 87.0% 88.6%
3427055 5.1.11.13 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › Beta-prop_RIC1_2nd 0.50 42.0 2.76e-01 89.9% 39.6%
D2 medium residues 234-353
PDB
Domain cluster: rep: protein_U95__YP_073826__Human_betaherpesvirus_7__10372__D619-769
CATH (38)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1eg3A01 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.73 26.0 4.42e-01 80.8% 100.0%
2ysiA01 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.69 22.0 3.91e-01 80.0% 100.0%
5cq2A02 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.67 24.0 3.93e-01 80.8% 90.7%
3le4A00 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.64 24.0 3.37e-01 87.5% 69.1%
2mdiA00 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.60 27.0 3.77e-01 75.0% 89.3%
5h1kB02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.58 45.0 3.30e-01 82.5% 99.1%
5m8cB01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.57 43.0 3.13e-01 79.2% 60.0%
4j4hA01 3.40.50.12150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.57 39.0 3.76e-01 96.7% 61.5%
1pguA02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.57 44.0 3.22e-01 81.7% 98.8%
2ymsC00 2.40.10.480 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.55 34.0 4.21e-01 84.2% 100.0%
1a2pA00 3.10.450.30 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Microbial ribonucleases 0.55 39.0 4.09e-01 72.5% 100.0%
4cvbA00 2.140.10.10 Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Quinoprotein alcohol dehydrogenase-like superfamily 0.55 45.0 2.91e-01 88.3% 84.7%
4iglB00 2.180.10.10 Mainly Beta › Shell › RHS repeat-associated core › RHS repeat-associated core 0.55 41.0 2.57e-01 78.3% 52.3%
4h5iB00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 47.0 3.43e-01 95.0% 95.7%
4wjsA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.54 45.0 3.21e-01 92.5% 75.3%
6n8pA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 46.0 3.23e-01 92.5% 62.2%
4lg8A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 44.0 3.25e-01 89.2% 64.8%
4lg9A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 45.0 3.22e-01 91.7% 70.3%
8gq6A01 2.120.10.80 Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller 0.53 41.0 3.07e-01 82.5% 91.2%
4nsxA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 44.0 3.16e-01 88.3% 75.6%
2pm9A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 44.0 3.19e-01 90.0% 81.3%
7sulB01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 45.0 3.25e-01 92.5% 54.4%
3ow8C00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 43.0 3.23e-01 89.2% 67.7%
6fcvB00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 44.0 3.11e-01 90.8% 76.2%
2v1rA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.52 29.0 3.61e-01 75.8% 94.0%
1a0rB00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 44.0 3.15e-01 90.8% 72.0%
4nsxA02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 44.0 3.29e-01 93.3% 95.8%
2aq5A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 43.0 3.13e-01 91.7% 64.1%
3hrpA02 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.51 44.0 3.28e-01 94.2% 85.2%
2cnxA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 43.0 3.20e-01 91.7% 65.0%
5ov3B01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 42.0 3.19e-01 91.7% 58.1%
6vp6A03 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 44.0 3.25e-01 96.7% 42.0%
1gxrA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 43.0 3.12e-01 92.5% 48.1%
2vknA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.51 26.0 3.27e-01 70.0% 86.4%
8f5pE01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 44.0 3.16e-01 99.2% 42.1%
1ijqA01 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.50 42.0 3.28e-01 89.2% 89.4%
5hqgA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.50 43.0 3.16e-01 93.3% 63.0%
4nwyA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.50 36.0 3.56e-01 97.5% 70.3%
ECOD (49)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3714009 64.1.1.14 ↗ beta meanders › WW domain-like › WW domain › WW domain › PF30846 0.69 31.0 4.52e-01 96.7% 100.0%
3709353 64.1.1.1 ↗ beta meanders › WW domain-like › WW domain › WW domain › WW 0.68 31.0 4.42e-01 75.0% 100.0%
3461364 5.1.3.54 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF1668 0.58 41.0 2.88e-01 71.7% 43.0%
3681536 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.58 42.0 2.80e-01 75.0% 26.4%
3461988 5.1.3.54 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF1668 0.58 40.0 2.82e-01 70.0% 40.9%
3255424 5.1.3.19 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Hira 0.57 40.0 3.59e-01 71.7% 68.5%
3912572 5.1.5.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DPPIV_N,DPPIV_rep 0.57 42.0 2.78e-01 76.7% 88.5%
3533928 5.1.4.171 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › HELP+Beta-prop_EML 0.57 45.0 3.22e-01 84.2% 86.9%
3831579 5.1.3.67 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.56 42.0 3.15e-01 80.0% 92.7%
3464481 5.1.3.142 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like 0.55 45.0 3.17e-01 86.7% 96.5%
3104388 5.1.5.92 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40, Beta-prop_EML 0.55 46.0 3.28e-01 90.0% 95.0%
3344584 5.1.5.98 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › b-prop_At3g26010-like 0.54 43.0 3.35e-01 87.5% 39.6%
3642447 5.1.3.65 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF295 0.53 45.0 3.35e-01 93.3% 54.6%
3514791 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.53 45.0 3.16e-01 91.7% 75.5%
3466257 5.1.3.142 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like 0.53 44.0 3.26e-01 93.3% 54.2%
3484105 5.1.2.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.53 47.0 4.35e-01 96.7% 92.7%
3628520 5.1.4.308 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, LLGL 0.52 47.0 2.83e-01 100.0% 24.0%
3580852 5.1.4.308 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, LLGL 0.52 47.0 3.10e-01 100.0% 40.3%
3223450 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.52 44.0 3.10e-01 91.7% 95.6%
3223991 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.52 43.0 3.22e-01 89.2% 95.7%
3540912 5.1.5.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.52 44.0 3.25e-01 91.7% 81.3%
4016523 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.52 44.0 3.16e-01 90.8% 50.6%
3761733 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.52 44.0 3.20e-01 91.7% 77.6%
3933159 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.52 42.0 3.13e-01 88.3% 42.6%
3935168 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.52 43.0 3.26e-01 88.3% 80.0%
3845022 5.1.11.11 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › WD40 0.52 45.0 2.86e-01 93.3% 26.1%
3485317 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.52 47.0 2.98e-01 99.2% 28.5%
4029617 5.1.11.39 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › DUF7899 0.52 43.0 2.94e-01 92.5% 35.4%
3480502 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.51 45.0 2.89e-01 95.8% 20.8%
4001865 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.51 44.0 3.15e-01 93.3% 62.3%
3935890 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.51 45.0 3.28e-01 95.8% 94.8%
3566570 109.46.1.9 ↗ alpha superhelices › Repetitive alpha hairpins › Helical domain in TOPLESS related protein 2 (TPR2) › Helical domain in TOPLESS related protein 2 (TPR2) › WD40 0.51 44.0 2.87e-01 91.7% 49.0%
4193845 5.1.4.279 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF26550 0.51 43.0 3.07e-01 90.8% 42.5%
3941202 5.1.4.501 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › LLGL, ANAPC4_WD40 0.51 45.0 3.21e-01 100.0% 72.2%
None — 0.51 44.0 3.27e-01 92.5% 54.2%
3594793 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.51 45.0 3.30e-01 95.8% 51.1%
3390301 5.1.4.102 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40_3 0.51 43.0 3.26e-01 92.5% 84.4%
3873021 5.1.5.4 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DPPIV_N 0.51 44.0 2.89e-01 93.3% 26.3%
3800252 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.51 44.0 2.82e-01 92.5% 29.4%
3580811 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.51 44.0 3.45e-01 92.5% 66.3%
3227700 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.51 44.0 3.45e-01 94.2% 71.6%
3591884 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.51 44.0 2.91e-01 95.8% 63.5%
4028641 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.51 44.0 2.70e-01 94.2% 47.5%
3409843 5.1.5.4 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DPPIV_N 0.50 45.0 3.07e-01 99.2% 58.7%
3390512 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.50 42.0 3.08e-01 90.8% 92.4%
1885591 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.50 43.0 3.09e-01 94.2% 36.7%
3477923 5.1.4.254 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_NOL10_N 0.50 43.0 3.19e-01 93.3% 92.5%
1107292 5.1.4.53 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › DUF4784 0.50 42.0 3.18e-01 91.7% 48.0%
3929699 5.1.4.244 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_ELP1_2nd 0.50 40.0 3.06e-01 84.2% 63.0%