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gp41
Euk-VirSpodoptera_frugiperda_granulovirus
gp41__YP_009121888__Spodoptera_frugiperda_granulovirus__307454
Identity
- Accession:
- YP_009121888 ↗
- Protein ID:
- gp41
- Kingdom:
- euk
Quality
67.7
mean pLDDT
Taxonomy
TaxID: 307454
Cluster
View cluster (31 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 142-240
Domain cluster:
rep: GP41__YP_006908607__Epinotia_aporema_granulovirus__166056__D135-233
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04700.18 best | Baculo_gp41 | 125.1 | 4.10e-36 | 100.0% | 52.7% |
D2
medium
residues 82-141
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04700.18 best | Baculo_gp41 | 99.1 | 4.00e-28 | 100.0% | 31.2% |
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4a18O00 | 3.30.390.110 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › | 0.62 | 44.0 | 3.37e-01 | 78.3% | 33.6% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3417218 | 101.1.1.66 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_5 | 0.68 | 55.0 | 4.71e-01 | 90.0% | 74.0% |
| 3924148 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.57 | 49.0 | 3.54e-01 | 93.3% | 70.9% |