gp41

Euk-Vir

Hyposidra_talaca_nucleopolyhedrovirus

gp41__YP_010086337__Hyposidra_talaca_nucleopolyhedrovirus__1070315

Identity

63.5 mean pLDDT

Naldaviricetes› Lefavirales› Baculoviridae› Alphabaculovirus› Hyposidra_talaca_nucleopolyhedrovirus

TaxID: 1070315

View cluster (13 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 97-220

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04700.18 best	Baculo_gp41	85.5	5.70e-24	63.7%	39.8%

CATH (6)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1t6jA03	1.10.274.20	Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Phenylalanine ammonia-lyase 1; domain 3	0.58	28.0	3.12e-01	71.0%	57.3%
6pnjL00	1.20.1240.10	Mainly Alpha › Up-down Bundle › Photosystem 1 Reaction Centre Subunit Xi; Chain: L; › Photosystem I PsaL, reaction centre subunit XI	0.58	32.0	2.99e-01	73.4%	42.9%
1h97A00	1.10.490.10	Mainly Alpha › Orthogonal Bundle › Globin-like › Globins	0.55	36.0	3.45e-01	81.5%	55.8%
2a3vB01	1.10.150.130	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain	0.52	27.0	3.09e-01	91.1%	66.0%
3jyhA02	1.20.120.980	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Serine carboxypeptidase S28, SKS domain	0.50	29.0	2.73e-01	77.4%	46.3%
3lynB00	1.20.150.10	Mainly Alpha › Up-down Bundle › Lysin › Fertilization protein	0.50	29.0	2.93e-01	100.0%	54.8%

D2 medium residues 227-343_356-375

PDB

Domain cluster: rep: GP41__YP_006607820__Apocheima_cinerarium_nucleopolyhedrovirus__307461__D253-383

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04700.18 best	Baculo_gp41	129.5	1.80e-37	74.5%	55.9%