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gwa1_scaffold_0_prodigal-single.1__X__X__00033
Bact-Virgwa1_scaffold_0_prodigal-single.1__X__X__00033
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 28-40_56-200
Domain cluster:
rep: CAKLQF020000002.1__CAH1073732.1__SAMEA5780031_00643__00271__D39-61_134-168_216-372
CATH (42)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1p4tA00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.79 | 71.0 | 7.19e-01 | 100.0% | 95.5% |
| 2q03A00 | 2.40.350.10 | Mainly Beta › Beta Barrel › AOC barrel-like › SO1590-like | 0.77 | 58.0 | 6.30e-01 | 90.5% | 91.0% |
| 2f1vA00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.76 | 73.0 | 6.89e-01 | 100.0% | 96.2% |
| 1qj8A00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.74 | 65.0 | 6.70e-01 | 100.0% | 97.3% |
| 2ervA00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.74 | 67.0 | 6.88e-01 | 100.0% | 98.7% |
| 1i78B00 | 2.40.128.90 | Mainly Beta › Beta Barrel › Lipocalin › OMPT-like | 0.71 | 65.0 | 5.29e-01 | 100.0% | 96.9% |
| 4fuvA00 | 2.40.160.170 | Mainly Beta › Beta Barrel › Porin › | 0.69 | 66.0 | 5.84e-01 | 100.0% | 96.2% |
| 2vdfA00 | 2.40.128.100 | Mainly Beta › Beta Barrel › Lipocalin › OPCA outer membrane adhesin/invasin | 0.69 | 64.0 | 5.65e-01 | 100.0% | 99.1% |
| 6qwrA01 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.69 | 65.0 | 6.06e-01 | 100.0% | 98.4% |
| 7x7zA01 | 2.40.480.10 | Mainly Beta › Beta Barrel › AOC barrel-like › Allene oxide cyclase-like | 0.67 | 52.0 | 5.54e-01 | 93.0% | 92.1% |
| 3jcuO01 | 2.40.160.30 | Mainly Beta › Beta Barrel › Porin › Photosystem II, cytochrome c-550 precursor | 0.64 | 59.0 | 5.72e-01 | 100.0% | 90.9% |
| 3hpeA00 | 2.40.128.110 | Mainly Beta › Beta Barrel › Lipocalin › Lipid/polyisoprenoid-binding, YceI-like | 0.63 | 59.0 | 5.85e-01 | 98.7% | 100.0% |
| 2w4yA00 | 2.40.160.220 | Mainly Beta › Beta Barrel › Porin › | 0.59 | 33.0 | 3.77e-01 | 74.1% | 70.5% |
| 4meeA00 | 2.40.128.130 | Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain | 0.59 | 55.0 | 4.39e-01 | 100.0% | 88.8% |
| 6r3wA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.59 | 52.0 | 5.20e-01 | 100.0% | 91.9% |
| 3dwoX00 | 2.40.160.60 | Mainly Beta › Beta Barrel › Porin › Outer membrane protein transport protein (OMPP1/FadL/TodX) | 0.58 | 54.0 | 3.89e-01 | 100.0% | 97.5% |
| 3kvnA02 | 2.40.128.130 | Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain | 0.57 | 54.0 | 4.24e-01 | 100.0% | 89.0% |
| 3qq2B00 | 2.40.128.130 | Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain | 0.57 | 53.0 | 4.51e-01 | 100.0% | 98.4% |
| 3fidA00 | 2.40.128.140 | Mainly Beta › Beta Barrel › Lipocalin › Outer membrane protein | 0.57 | 51.0 | 4.19e-01 | 98.7% | 99.7% |
| 2fwvA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.56 | 49.0 | 4.62e-01 | 99.4% | 77.9% |
| 1uynX00 | 2.40.128.130 | Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain | 0.56 | 52.0 | 4.27e-01 | 100.0% | 87.5% |
| 2qomB00 | 2.40.128.130 | Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain | 0.55 | 49.0 | 4.18e-01 | 100.0% | 96.7% |
| 3wjcA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.55 | 48.0 | 4.94e-01 | 98.1% | 98.7% |
| 3sy9C01 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.54 | 45.0 | 3.44e-01 | 88.0% | 83.0% |
| 1g6q102 | 2.70.160.11 | Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 | 0.53 | 41.0 | 3.93e-01 | 80.4% | 100.0% |
| 1a0sP00 | 2.40.170.10 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › Porin, LamB type | 0.53 | 49.0 | 3.58e-01 | 98.7% | 98.3% |
| 4epaA00 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.53 | 46.0 | 3.06e-01 | 94.3% | 82.3% |
| 6wilA01 | 2.40.160.50 | Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family | 0.53 | 47.0 | 3.57e-01 | 94.3% | 49.3% |
| 2wjqA00 | 2.40.160.40 | Mainly Beta › Beta Barrel › Porin › monomeric porin ompg | 0.52 | 48.0 | 4.41e-01 | 98.7% | 100.0% |
| 7vu0A01 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.52 | 46.0 | 3.37e-01 | 94.9% | 45.9% |
| 6i7sG01 | 2.30.230.10 | Mainly Beta › Roll › Lipovitellin-phosvitin complex; beta-sheet shell regions › Lipovitellin; beta-sheet shell regions, chain A | 0.52 | 47.0 | 4.04e-01 | 100.0% | 90.2% |
| 4e1sA00 | 2.40.160.160 | Mainly Beta › Beta Barrel › Porin › Inverse autotransporter, beta-domain | 0.52 | 48.0 | 4.14e-01 | 100.0% | 82.2% |
| 2hdiA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.52 | 40.0 | 2.84e-01 | 80.4% | 36.3% |
| 6wimA01 | 2.40.160.50 | Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family | 0.51 | 46.0 | 3.43e-01 | 94.3% | 49.7% |
| 6fokB01 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.51 | 45.0 | 3.03e-01 | 97.5% | 41.8% |
| 2f1cX00 | 2.40.160.40 | Mainly Beta › Beta Barrel › Porin › monomeric porin ompg | 0.51 | 47.0 | 4.02e-01 | 100.0% | 86.5% |
| 1cbyA00 | 3.40.198.10 | Alpha Beta › 3-Layer(aba) Sandwich › Delta-endotoxin CytB › Delta-endotoxin CytB-like | 0.51 | 38.0 | 3.34e-01 | 84.2% | 53.7% |
| 3efmA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.51 | 44.0 | 3.18e-01 | 93.0% | 38.5% |
| 4fqeA00 | 2.40.160.40 | Mainly Beta › Beta Barrel › Porin › monomeric porin ompg | 0.51 | 47.0 | 4.61e-01 | 99.4% | 100.0% |
| 3v89A02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.50 | 44.0 | 2.92e-01 | 92.4% | 45.5% |
| 4afkA00 | 2.40.160.100 | Mainly Beta › Beta Barrel › Porin › | 0.50 | 44.0 | 3.17e-01 | 93.0% | 44.9% |
| 3jtyB01 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.50 | 45.0 | 3.40e-01 | 97.5% | 97.9% |
ECOD (51)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4224449 | 5084.1.1.29 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › PF27340 | 0.80 | 77.0 | 7.39e-01 | 100.0% | 95.4% |
| 4285298 | 5084.1.1.29 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › PF27340 | 0.80 | 76.0 | 7.07e-01 | 100.0% | 96.3% |
| 4042627 | 5084.1.1.10 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl | 0.78 | 75.0 | 7.38e-01 | 100.0% | 97.6% |
| 4531587 | 5084.1.1.35 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Surface_Ag_2 | 0.77 | 74.0 | 6.44e-01 | 100.0% | 93.3% |
| 3837982 | 5084.1.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like | 0.77 | 74.0 | 7.05e-01 | 100.0% | 90.0% |
| 3975660 | 5084.1.1.10 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl | 0.77 | 73.0 | 6.48e-01 | 100.0% | 97.2% |
| 3388060 | 5084.1.1.10 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl | 0.77 | 72.0 | 6.78e-01 | 100.0% | 98.4% |
| 4971555 | 9.13.1.3 ↗ | beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like › DUF3224 | 0.77 | 57.0 | 6.00e-01 | 88.6% | 84.0% |
| 4683047 | 5084.1.1.29 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › PF27340 | 0.77 | 73.0 | 7.23e-01 | 100.0% | 96.4% |
| 4197411 | 5084.1.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like | 0.76 | 73.0 | 6.63e-01 | 100.0% | 94.5% |
| 4301927 | 5084.1.1.10 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl | 0.76 | 72.0 | 6.27e-01 | 100.0% | 93.9% |
| 4172098 | 5084.1.1.10 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl | 0.75 | 72.0 | 6.53e-01 | 100.0% | 98.0% |
| 3975352 | 5084.1.1.10 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl | 0.75 | 67.0 | 6.85e-01 | 100.0% | 96.7% |
| 145377 | 5084.1.1.10 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl | 0.75 | 66.0 | 6.76e-01 | 100.0% | 96.1% |
| 3164538 | 5084.1.1.2 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OmpA_membrane | 0.75 | 71.0 | 6.52e-01 | 100.0% | 92.8% |
| 3165475 | 5084.1.1.4 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Opacity | 0.74 | 70.0 | 7.08e-01 | 100.0% | 98.7% |
| 3838975 | 5084.1.1.15 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP | 0.73 | 69.0 | 6.47e-01 | 99.4% | 96.8% |
| 3839251 | 5084.1.1.15 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP | 0.72 | 67.0 | 6.31e-01 | 98.7% | 93.5% |
| 3977398 | 5084.1.1.16 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Ail_Lom | 0.68 | 64.0 | 6.44e-01 | 100.0% | 98.8% |
| 3506244 | 5084.1.1.16 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Ail_Lom | 0.68 | 64.0 | 6.16e-01 | 100.0% | 97.1% |
| 3290625 | 9.5.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Hypothetical protein TT1927B › Hypothetical protein TT1927B › YceI | 0.65 | 60.0 | 5.98e-01 | 98.7% | 100.0% |
| 3976237 | 5084.6.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Tsx-like channel › Tsx-like channel › Channel_Tsx | 0.61 | 57.0 | 5.05e-01 | 99.4% | 100.0% |
| 3968722 | 5084.6.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Tsx-like channel › Tsx-like channel | 0.60 | 55.0 | 4.69e-01 | 99.4% | 96.9% |
| 1568816 | 5084.1.1.11 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Phenol_MetA_deg | 0.59 | 54.0 | 4.53e-01 | 99.4% | 94.8% |
| 4162922 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.58 | 55.0 | 4.29e-01 | 100.0% | 86.1% |
| 3838722 | 5084.3.1.3 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › PF29188 | 0.58 | 52.0 | 4.19e-01 | 99.4% | 87.6% |
| 4038477 | 5084.3.1.3 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › PF29188 | 0.58 | 52.0 | 4.18e-01 | 98.7% | 82.2% |
| 4150627 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.58 | 50.0 | 4.00e-01 | 92.4% | 87.7% |
| 3970016 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.57 | 53.0 | 3.95e-01 | 100.0% | 93.1% |
| 4291640 | 5084.5.4.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › Toluene_X | 0.57 | 53.0 | 3.85e-01 | 99.4% | 93.7% |
| 200993 | 5084.9.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Lipid A deacylase LpxR › Lipid A deacylase LpxR › LpxR | 0.57 | 51.0 | 4.19e-01 | 98.7% | 99.7% |
| 3976425 | 5084.5.1.8 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › KdgM | 0.57 | 53.0 | 4.75e-01 | 99.4% | 99.5% |
| 3386218 | 5084.5.1.21 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › DUF3373 | 0.56 | 52.0 | 3.83e-01 | 100.0% | 96.0% |
| 4066987 | 5084.10.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › LPS-assembly protein LptD › LPS-assembly protein LptD › LptD | 0.56 | 43.0 | 2.91e-01 | 80.4% | 30.9% |
| 3164364 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.56 | 52.0 | 4.24e-01 | 100.0% | 85.1% |
| 3971597 | 5084.5.1.5 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › ShlB | 0.56 | 49.0 | 3.79e-01 | 94.9% | 97.7% |
| 3983528 | 5084.3.1.2 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › IAT_beta | 0.55 | 51.0 | 4.36e-01 | 100.0% | 83.1% |
| 3977722 | 5084.5.1.8 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › KdgM | 0.55 | 51.0 | 4.58e-01 | 99.4% | 100.0% |
| 4419134 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.55 | 49.0 | 4.03e-01 | 98.1% | 82.4% |
| 3964572 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.55 | 49.0 | 4.05e-01 | 100.0% | 85.7% |
| 4201740 | 5087.3.1.1 ↗ | beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1C › Lipovitellin LV-1C › Vit_open_b-sht | 0.54 | 41.0 | 3.12e-01 | 77.2% | 54.3% |
| 1558583 | 5084.5.4.2 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › CymA | 0.54 | 49.0 | 3.90e-01 | 98.1% | 93.0% |
| 3968806 | 5084.5.1.68 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › PF27733 | 0.54 | 49.0 | 4.50e-01 | 99.4% | 92.8% |
| 4416793 | 5084.5.2.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Maltoporin-like › LamB | 0.53 | 48.0 | 3.54e-01 | 96.8% | 99.5% |
| 4135567 | 5084.5.1.5 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › ShlB | 0.53 | 46.0 | 3.46e-01 | 93.0% | 92.8% |
| 4329332 | 5084.5.1.18 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › BCSC_C | 0.52 | 47.0 | 3.47e-01 | 96.2% | 62.7% |
| 4449332 | 5084.5.1.18 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › BCSC_C | 0.52 | 41.0 | 3.15e-01 | 82.3% | 67.3% |
| 3385752 | 5084.5.4.7 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › DUF2860 | 0.52 | 45.0 | 3.67e-01 | 93.0% | 65.4% |
| 3615728 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.51 | 44.0 | 3.21e-01 | 90.5% | 52.0% |
| 4200093 | 5084.5.1.9 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_O_P | 0.51 | 44.0 | 3.32e-01 | 93.0% | 46.9% |
| 1806543 | 5084.5.1.15 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › PgaA_barrel | 0.50 | 43.0 | 3.50e-01 | 94.3% | 49.3% |