←Back to structures
gwa1_scaffold_0_prodigal-single.1__X__X__00266
Bact-Virgwa1_scaffold_0_prodigal-single.1__X__X__00266
Identity
- Kingdom:
- phage
Quality
96.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-95
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4zevA02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.59 | 42.0 | 4.05e-01 | 75.0% | 95.3% |
| 2hf2B02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.57 | 40.0 | 3.87e-01 | 75.0% | 95.3% |
| 3e0zA00 | 1.20.58.1400 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Domain of unknown function DUF3837 | 0.56 | 38.0 | 3.67e-01 | 92.4% | 60.7% |
| 2b30A02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.54 | 42.0 | 4.06e-01 | 87.0% | 97.2% |
| 4dw8A02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.53 | 42.0 | 4.06e-01 | 87.0% | 97.2% |
| 4emyA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.52 | 39.0 | 3.19e-01 | 87.0% | 42.9% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5013284 | 3012.1.1.0 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain | 0.61 | 44.0 | 4.76e-01 | 75.0% | 96.0% |
| 5011633 | 3012.1.1.0 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain | 0.61 | 46.0 | 4.51e-01 | 81.5% | 82.7% |
| 5008101 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.59 | 44.0 | 4.25e-01 | 82.6% | 70.0% |
| 4978365 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.58 | 38.0 | 4.04e-01 | 84.8% | 77.5% |
| 4962382 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.58 | 44.0 | 4.17e-01 | 82.6% | 69.1% |
| 1828353 | 1064.1.1.1 ↗ | alpha complex topology › Tegument protein UL21 › Tegument protein UL21 › Tegument protein UL21 › Herpes_UL21 | 0.57 | 41.0 | 3.04e-01 | 76.1% | 96.8% |
| 3411894 | 3012.1.1.0 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain | 0.56 | 40.0 | 4.23e-01 | 75.0% | 87.5% |
| 4981852 | 2006.1.1.11 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase_3 | 0.56 | 39.0 | 2.95e-01 | 73.9% | 29.1% |
| 4946992 | 873.1.1.1 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › V4R | 0.55 | 46.0 | 3.84e-01 | 94.6% | 71.1% |
| 4943870 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.55 | 47.0 | 4.48e-01 | 98.9% | 97.4% |
| 4973737 | 2006.1.1.7 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › S6PP | 0.55 | 40.0 | 3.01e-01 | 88.0% | 29.2% |
| 3958915 | 3012.1.1.0 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain | 0.55 | 39.0 | 4.09e-01 | 73.9% | 87.5% |
| 3602171 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.54 | 37.0 | 3.98e-01 | 81.5% | 88.0% |
| 4977026 | 873.1.1.1 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › V4R | 0.54 | 46.0 | 4.14e-01 | 97.8% | 83.7% |
| 4025741 | 310.2.1.1 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › RRF | 0.53 | 37.0 | 3.07e-01 | 73.9% | 40.6% |
| 4016359 | 101.1.2.170 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_51 | 0.52 | 39.0 | 3.75e-01 | 83.7% | 70.5% |
| 5071258 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.52 | 43.0 | 3.43e-01 | 97.8% | 66.0% |
| 3707836 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 40.0 | 4.11e-01 | 95.7% | 87.8% |
| 3206762 | 206.1.1.11 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH | 0.51 | 37.0 | 2.74e-01 | 77.2% | 58.9% |
| 3333590 | 304.3.1.1 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA | 0.51 | 39.0 | 4.07e-01 | 83.7% | 100.0% |