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gwa1_scaffold_0_prodigal-single.1__X__X__00376

Bact-Vir

gwa1_scaffold_0_prodigal-single.1__X__X__00376

Identity

Kingdom:
phage

Quality

80.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 219-382
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00204.32 best DNA_gyraseB 134.3 4.50e-39 100.0% 98.3%
D2 high residues 501-607_805-830
PDB
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2cw8A01 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.90 87.0 7.90e-01 100.0% 94.7%
1dq3A01 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.90 87.0 7.73e-01 100.0% 94.9%
5o9iA00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.90 87.0 7.81e-01 100.0% 94.7%
2lcjA00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.87 83.0 7.29e-01 100.0% 95.1%
4e2tB00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.86 82.0 7.43e-01 100.0% 94.7%
4o1sA00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.85 81.0 7.36e-01 100.0% 91.8%
2jmzA01 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.84 80.0 7.31e-01 100.0% 94.6%
1mi8A00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.83 78.0 7.61e-01 100.0% 90.8%
6vgwA01 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.82 77.0 7.55e-01 100.0% 92.2%
1am2A00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.80 77.0 6.78e-01 100.0% 94.5%
1at0A00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.80 76.0 7.41e-01 100.0% 92.4%
2lwyA00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.80 73.0 7.19e-01 100.0% 91.3%
6zgqA01 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.77 73.0 7.08e-01 100.0% 95.2%
2zuoA09 2.30.30.570 Mainly Beta › Roll › SH3 type barrels. › 0.61 26.0 3.62e-01 96.2% 81.0%
2gfaB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.54 25.0 3.32e-01 88.0% 85.5%
5c94A00 2.40.10.250 Mainly Beta › Beta Barrel › Thrombin, subunit H › Replicase NSP9 0.51 32.0 3.48e-01 100.0% 74.1%
ECOD (85)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4975971 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.92 82.0 8.31e-01 100.0% 94.6%
5066389 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.91 88.0 7.62e-01 100.0% 93.2%
5031914 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.91 88.0 7.66e-01 100.0% 90.8%
4971412 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.91 87.0 7.63e-01 98.5% 96.1%
4054994 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.90 88.0 7.90e-01 100.0% 91.2%
4170121 69.1.1.11 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › PT-HINT, Intein_splicing 0.90 86.0 7.79e-01 100.0% 94.1%
4943244 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.89 86.0 7.76e-01 100.0% 94.7%
4970868 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.89 69.0 7.12e-01 78.9% 94.4%
5009161 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.89 85.0 6.29e-01 100.0% 96.0%
4405102 242.1.1.8 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3, Intein_splicing 0.89 85.0 6.29e-01 100.0% 97.7%
4997604 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.89 85.0 7.71e-01 100.0% 90.6%
4039971 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.88 84.0 7.54e-01 100.0% 93.1%
4993853 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.87 85.0 7.72e-01 100.0% 94.5%
4594307 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.87 84.0 7.59e-01 100.0% 94.1%
4944478 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.87 67.0 7.08e-01 78.9% 98.3%
182766 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.87 83.0 7.29e-01 100.0% 95.1%
3604439 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.87 83.0 7.53e-01 100.0% 92.4%
5029854 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.87 83.0 6.93e-01 100.0% 92.4%
4405940 242.1.1.8 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3, Intein_splicing 0.87 83.0 5.46e-01 100.0% 34.3%
5029540 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.87 84.0 7.74e-01 100.0% 94.4%
3604113 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.87 84.0 8.10e-01 100.0% 93.1%
5013038 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.86 83.0 7.70e-01 100.0% 92.5%
4642797 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.86 83.0 7.48e-01 100.0% 94.1%
4993581 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.86 83.0 7.53e-01 100.0% 91.2%
4983458 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.86 83.0 7.62e-01 100.0% 93.9%
5029355 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.86 83.0 7.92e-01 100.0% 94.7%
4930433 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.86 83.0 7.77e-01 100.0% 92.9%
5012957 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.86 83.0 7.41e-01 100.0% 93.7%
4993813 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.86 82.0 7.64e-01 100.0% 93.1%
2524072 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.86 82.0 7.45e-01 100.0% 93.5%
4975503 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.86 82.0 7.26e-01 100.0% 94.4%
5031634 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.85 82.0 7.63e-01 100.0% 89.4%
4322985 2004.1.1.14 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GTP_EFTU 0.85 77.0 5.44e-01 100.0% 35.2%
4977673 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.85 82.0 6.65e-01 100.0% 95.6%
5014854 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.85 81.0 6.72e-01 100.0% 93.5%
4975578 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.85 82.0 6.20e-01 100.0% 53.5%
4993454 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.85 82.0 6.52e-01 100.0% 93.6%
4283619 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.85 64.0 6.62e-01 77.4% 94.4%
4993480 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.85 81.0 7.56e-01 100.0% 93.1%
5022295 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.84 81.0 7.43e-01 100.0% 92.7%
164902 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.84 80.0 7.12e-01 100.0% 88.3%
4326329 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.84 80.0 7.27e-01 100.0% 91.8%
4940451 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.84 77.0 7.74e-01 99.2% 94.1%
4971400 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.84 81.0 5.99e-01 100.0% 49.8%
4999896 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.84 66.0 6.79e-01 80.5% 89.6%
4948016 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.83 78.0 7.48e-01 97.7% 92.7%
5028788 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.83 78.0 7.64e-01 100.0% 92.1%
5035476 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.82 80.0 7.39e-01 100.0% 92.5%
4983616 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.82 78.0 7.09e-01 100.0% 94.1%
5030213 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.82 78.0 7.43e-01 100.0% 87.3%
5052154 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.82 78.0 7.19e-01 100.0% 93.9%
5028299 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.82 78.0 7.34e-01 100.0% 93.5%
3949584 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.81 78.0 7.42e-01 99.2% 94.0%
4979631 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.81 78.0 7.46e-01 100.0% 94.0%
4600944 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.81 78.0 6.97e-01 100.0% 76.6%
4487998 69.1.1.1 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint 0.81 78.0 6.96e-01 100.0% 76.6%
4984220 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.81 77.0 7.26e-01 100.0% 95.5%
4070999 69.1.1.1 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint 0.81 78.0 7.30e-01 100.0% 86.5%
4940943 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.81 77.0 7.01e-01 100.0% 92.9%
4948019 69.1.1.17 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › MCM 0.81 77.0 6.92e-01 100.0% 92.0%
1291738 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.81 60.0 6.64e-01 96.2% 92.7%
5065032 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.81 77.0 7.07e-01 100.0% 94.5%
4992473 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.80 77.0 6.98e-01 100.0% 86.5%
4544734 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.80 77.0 6.42e-01 100.0% 95.7%
4500960 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.80 76.0 7.38e-01 100.0% 94.5%
4998394 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.80 73.0 6.92e-01 96.2% 95.5%
4945569 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.80 77.0 7.21e-01 100.0% 91.0%
5002632 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.79 76.0 7.25e-01 100.0% 92.6%
4999902 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.79 76.0 7.36e-01 100.0% 93.8%
3517362 69.1.1.1 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint 0.79 75.0 7.34e-01 100.0% 93.1%
4315406 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.79 76.0 6.70e-01 100.0% 95.6%
4996401 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.79 75.0 6.96e-01 100.0% 92.5%
4586920 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.79 76.0 7.12e-01 100.0% 93.5%
3934143 69.1.1.1 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint 0.79 74.0 7.31e-01 100.0% 93.6%
5065932 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.78 73.0 7.14e-01 100.0% 92.1%
3603108 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.78 74.0 7.19e-01 100.0% 91.0%
4045174 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.78 74.0 6.81e-01 100.0% 91.5%
4243055 69.1.1.1 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint 0.78 74.0 6.38e-01 100.0% 68.7%
3518586 69.1.1.1 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint 0.78 74.0 6.26e-01 100.0% 66.3%
4950409 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.77 73.0 6.91e-01 100.0% 89.7%
5035795 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.77 73.0 7.06e-01 100.0% 92.4%
4180552 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.76 73.0 6.67e-01 100.0% 94.5%
3963364 69.1.1.3 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › PT-HINT 0.76 72.0 7.01e-01 100.0% 91.7%
2546507 69.1.1.2 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hom_end_hint 0.72 68.0 6.61e-01 100.0% 93.7%
4932851 69.1.1.1 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint 0.71 62.0 6.21e-01 100.0% 91.1%
D3 high residues 866-955
PDB
D4 medium residues 11-72_110-148_171-218
PDB
Domain cluster: representative
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1aj6A00 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.95 90.0 8.06e-01 97.3% 99.5%
3cwvA01 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.91 87.0 7.72e-01 98.7% 100.0%
1s14B00 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.89 85.0 7.87e-01 97.3% 100.0%
1pvgA01 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.87 84.0 6.90e-01 100.0% 95.5%
1mu5A01 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.83 78.0 6.84e-01 99.3% 99.5%
1xexB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 36.0 3.55e-01 97.3% 58.4%
7pwfD02 3.30.1140.32 Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › Ribosomal protein S3, C-terminal domain 0.55 23.0 2.89e-01 78.5% 61.8%
1s7mA03 2.20.25.140 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.55 14.0 2.58e-01 70.5% 100.0%
3bk2A03 3.10.20.580 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.54 24.0 2.87e-01 85.9% 57.6%
4oo1I01 2.40.50.880 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.53 19.0 2.57e-01 88.6% 58.7%
1tuoA02 3.40.120.10 Alpha Beta › 3-Layer(aba) Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3 › Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 0.51 30.0 3.83e-01 71.1% 100.0%
4hjhA02 3.40.120.10 Alpha Beta › 3-Layer(aba) Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3 › Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 0.50 28.0 3.65e-01 71.1% 100.0%
ECOD (17)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3959843 225.1.1.0 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 0.98 97.0 7.89e-01 100.0% 91.3%
4945731 225.1.1.38 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › DNA_gyraseB 0.98 96.0 7.98e-01 100.0% 92.2%
1223478 225.1.1.3 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c 0.98 96.0 7.59e-01 100.0% 83.3%
1223480 225.1.1.3 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c 0.98 89.0 7.80e-01 93.3% 95.6%
4027049 225.1.1.3 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c 0.96 94.0 7.48e-01 100.0% 88.4%
4038381 225.1.1.3 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c 0.95 93.0 7.79e-01 100.0% 94.7%
1734841 225.1.1.3 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c 0.91 89.0 7.94e-01 100.0% 96.9%
167860 225.1.1.0 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 0.90 87.0 7.74e-01 100.0% 100.0%
4421199 225.1.1.3 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c 0.90 86.0 7.08e-01 100.0% 95.5%
3318616 225.1.1.7 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c_3 0.86 82.0 6.92e-01 100.0% 96.9%
4930695 225.1.1.0 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 0.74 69.0 5.53e-01 100.0% 97.1%
3403121 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.73 33.0 3.02e-01 83.2% 33.7%
5058683 225.1.1.3 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c 0.70 59.0 5.54e-01 89.3% 90.6%
3992384 2008.1.1.29 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Dna2 0.59 35.0 3.09e-01 92.6% 38.2%
4980974 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.52 34.0 2.98e-01 95.3% 42.6%
5055406 7528.1.1.2 a/b three-layered sandwiches › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › PGM_PMM_II 0.51 29.0 3.47e-01 71.8% 83.0%
3780957 109.2.1.19 alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › C5-epim_C 0.51 37.0 2.85e-01 75.8% 95.1%
D5 medium residues 73-109_149-170
PDB
Domain cluster: representative
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1pvgA01 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.83 76.0 4.90e-01 100.0% 41.8%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3317524 225.1.1.0 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 0.76 68.0 4.58e-01 100.0% 59.2%
D6 medium residues 402-500_832-856
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01751.29 best Toprim 49.7 4.60e-13 91.9% 85.4%
CATH (38)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2xcqA01 3.40.50.670 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.91 77.0 6.54e-01 100.0% 58.0%
2zjtA01 3.40.50.670 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.88 64.0 6.59e-01 98.4% 78.6%
2n3zA00 3.40.50.11230 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.79 45.0 5.05e-01 91.9% 70.7%
6ouvA03 3.40.50.920 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.75 49.0 4.85e-01 97.6% 62.1%
3lteD00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.71 46.0 4.66e-01 97.6% 65.9%
7wgrA03 3.40.50.11610 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain 0.70 53.0 5.20e-01 98.4% 74.0%
1umdB02 3.40.50.920 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.70 49.0 4.88e-01 100.0% 69.5%
1vddA03 3.40.1360.10 Alpha Beta › 3-Layer(aba) Sandwich › Dna Topoisomerase Vi A Subunit; Chain: A, domain 2 › 0.68 48.0 5.43e-01 99.2% 96.7%
1pq4A01 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.65 41.0 3.80e-01 93.5% 50.7%
1ekjA00 3.40.1050.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-carbonic Anhydrase; Chain A › Carbonic anhydrase 0.62 56.0 4.67e-01 98.4% 73.8%
4i62A02 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.62 34.0 3.83e-01 91.1% 68.8%
7yiyA01 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.61 43.0 3.45e-01 86.3% 36.5%
1qgnG01 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.61 39.0 3.09e-01 91.9% 30.9%
1toaA01 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.61 38.0 3.64e-01 94.4% 53.8%
2o1eB01 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.60 38.0 3.56e-01 97.6% 50.3%
6gwuD00 3.40.1050.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-carbonic Anhydrase; Chain A › Carbonic anhydrase 0.60 54.0 4.60e-01 98.4% 73.3%
3re1A01 3.40.50.10090 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.60 44.0 4.50e-01 97.6% 77.9%
3mfqA01 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.60 36.0 3.46e-01 83.9% 52.5%
1dcfA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.56 43.0 4.25e-01 97.6% 75.9%
2q5cA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.55 41.0 4.58e-01 96.0% 99.0%
5by7A02 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.55 36.0 3.44e-01 94.4% 54.8%
3eodA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.55 40.0 4.18e-01 98.4% 81.7%
5lomA02 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.54 33.0 3.72e-01 95.2% 82.4%
1nytA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.54 38.0 3.65e-01 94.4% 63.6%
3mw8A02 3.40.50.10090 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.53 39.0 3.99e-01 95.2% 79.0%
1vi6C01 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.53 38.0 3.38e-01 96.0% 50.0%
4bucA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.53 37.0 4.13e-01 98.4% 95.7%
3mtqB00 3.40.50.510 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphotransferase system, mannose-type IIA component 0.53 44.0 4.31e-01 96.8% 82.5%
5mp7A02 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.52 40.0 3.91e-01 95.2% 74.3%
1hslA02 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.52 34.0 3.68e-01 96.0% 81.2%
1iayA02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.51 44.0 3.53e-01 95.2% 52.4%
3a2bA02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.51 43.0 3.46e-01 95.2% 47.7%
1uanA00 3.40.50.10320 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › LmbE-like 0.51 44.0 3.69e-01 96.0% 65.0%
1ujnA01 3.40.50.1970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.51 44.0 4.07e-01 95.2% 77.0%
3ieiA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.51 45.0 3.42e-01 99.2% 72.6%
4g4pA02 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.50 32.0 3.58e-01 95.2% 83.3%
1pjqA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.50 35.0 3.69e-01 99.2% 80.4%
4dzrA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.50 44.0 4.06e-01 97.6% 82.2%
ECOD (49)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4406660 2006.1.3.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › DNA_gyraseB_C,Toprim 0.98 90.0 6.89e-01 100.0% 48.3%
None 0.98 90.0 6.93e-01 100.0% 49.4%
3964707 2006.1.3.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain 0.97 90.0 6.98e-01 100.0% 50.9%
4124102 2006.1.3.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain 0.97 90.0 6.87e-01 100.0% 48.8%
3520955 2006.1.3.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › DNA_gyraseB_C,Toprim 0.97 89.0 6.59e-01 100.0% 43.8%
4945733 2006.1.3.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain 0.97 89.0 6.70e-01 100.0% 46.4%
5059966 2006.1.3.2 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim 0.96 67.0 7.12e-01 71.0% 92.7%
None 0.96 89.0 6.83e-01 100.0% 49.4%
2452014 2006.1.3.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › DNA_gyraseB_C,Toprim 0.95 86.0 6.66e-01 100.0% 48.5%
3164150 2006.1.3.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › DNA_gyraseB_C,Toprim 0.94 85.0 6.71e-01 100.0% 51.1%
1878568 2006.1.3.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › DNA_gyraseB_C,Toprim 0.94 85.0 8.22e-01 100.0% 85.8%
4238497 2006.1.3.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › DNA_gyraseB_C,Toprim 0.92 84.0 6.58e-01 100.0% 50.9%
None 0.92 87.0 7.41e-01 100.0% 66.1%
4878011 2006.1.3.21 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › TOPRIM_C 0.90 80.0 6.48e-01 100.0% 54.0%
4100838 2006.1.3.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › DNA_gyraseB_C,Toprim 0.89 82.0 6.48e-01 100.0% 52.7%
3789608 2006.1.3.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain 0.85 81.0 6.03e-01 100.0% 45.8%
5014869 7522.1.1.0 a/b three-layered sandwiches › TK C-terminal domain-like › TK C-terminal domain-like › TK C-terminal domain-like 0.76 50.0 5.18e-01 100.0% 71.3%
4657416 2006.1.3.8 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_4,RecR_C 0.71 49.0 5.06e-01 99.2% 75.7%
2050795 2007.1.10.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › PrpR receptor domain-like › PrpR_N 0.70 41.0 4.66e-01 93.5% 78.9%
4627238 2007.1.8.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Uroporphyrinogen III synthase (U3S, HemD) › HEM4 0.68 48.0 4.61e-01 94.4% 63.6%
5000839 2007.25.1.1 a/b three-layered sandwiches › Flavodoxin-like › Rossmann-like domain in Ribosomal protein L1 › Rossmann-like domain in Ribosomal protein L1 › Ribosomal_L1 0.68 42.0 4.61e-01 97.6% 76.0%
5003515 7522.1.1.1 a/b three-layered sandwiches › TK C-terminal domain-like › TK C-terminal domain-like › TK C-terminal domain-like › Transketolase_C 0.67 45.0 4.69e-01 97.6% 73.7%
3958965 323.1.1.0 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases 0.67 43.0 4.11e-01 96.0% 54.0%
4994002 2007.1.8.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Uroporphyrinogen III synthase (U3S, HemD) › HEM4 0.66 45.0 5.04e-01 96.0% 92.5%
5021609 7522.1.1.4 a/b three-layered sandwiches › TK C-terminal domain-like › TK C-terminal domain-like › TK C-terminal domain-like › PFOR_II 0.66 45.0 4.75e-01 100.0% 76.3%
3717821 7568.1.1.0 a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain 0.62 42.0 4.34e-01 96.8% 73.9%
3495202 323.1.1.3 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.61 43.0 3.82e-01 98.4% 50.0%
5068530 2007.1.16.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Iron-sulphur enzyme Dph2 0.61 34.0 4.00e-01 91.9% 78.8%
3962980 323.1.1.3 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.59 35.0 3.31e-01 92.7% 46.0%
4398498 7568.1.1.4 a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › BRCT_2 0.58 33.0 3.28e-01 91.9% 51.1%
4011727 7577.1.1.1 a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_1_2 0.58 44.0 3.13e-01 91.1% 25.9%
3697509 7568.1.1.14 a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › NIBRIN_BRCT_II 0.57 51.0 5.10e-01 98.4% 97.6%
5010556 7577.1.1.3 a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_5 0.57 38.0 2.95e-01 93.5% 29.0%
4980682 2007.1.3.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like 0.56 45.0 4.87e-01 97.6% 100.0%
4063204 2003.1.8.8 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › MurCD/PglD N-terminal domain-like › KARI_N 0.54 37.0 4.15e-01 94.4% 92.6%
4088508 2003.1.8.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › MurCD/PglD N-terminal domain-like 0.54 37.0 4.12e-01 94.4% 92.6%
4500731 2003.1.8.11 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › MurCD/PglD N-terminal domain-like › 2-Hacid_dh_C 0.53 37.0 4.07e-01 94.4% 89.0%
4519349 2003.1.8.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › MurCD/PglD N-terminal domain-like 0.53 38.0 4.11e-01 98.4% 91.0%
3473187 2006.1.5.2 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Arginase/deacetylase › Hist_deacetyl 0.53 47.0 3.12e-01 97.6% 24.5%
4273341 2003.1.8.4 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › MurCD/PglD N-terminal domain-like › MurD-like_N 0.53 37.0 4.16e-01 99.2% 96.8%
4975134 2003.1.5.8 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Ubie_methyltran 0.52 41.0 3.48e-01 96.8% 50.7%
3601565 7568.1.1.0 a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain 0.51 43.0 4.39e-01 97.6% 95.8%
4493052 2003.1.8.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › MurCD/PglD N-terminal domain-like 0.51 37.0 4.05e-01 99.2% 96.8%
3964073 2005.1.1.22 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueH 0.51 43.0 3.64e-01 94.4% 68.4%
10459 2007.1.1.5 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › OTCace_N 0.50 35.0 3.34e-01 95.2% 59.3%
9150 2003.1.1.65 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD_binding_7 0.50 35.0 3.69e-01 99.2% 79.6%
4970456 2005.1.1.22 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueH 0.50 44.0 3.82e-01 97.6% 81.5%
3178144 7514.1.1.1 a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › NAD_binding_1 0.50 44.0 4.14e-01 97.6% 87.6%
3969724 7577.1.1.1 a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_1_2 0.50 42.0 3.29e-01 98.4% 42.6%
D7 medium residues 609-689
PDB
Domain cluster: representative
CATH (49)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2dchX01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.75 65.0 6.18e-01 93.8% 89.2%
4lq0A02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.68 55.0 4.60e-01 90.1% 65.3%
3e54A00 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.66 56.0 4.51e-01 93.8% 61.6%
3mahA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.65 43.0 4.58e-01 74.1% 78.6%
3tviA02 3.30.2130.10 Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like 0.64 45.0 3.60e-01 72.8% 86.8%
3fzqA02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.64 45.0 4.03e-01 74.1% 97.4%
5hatA01 3.30.70.150 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RuBisCO large subunit, N-terminal domain 0.63 43.0 3.69e-01 71.6% 90.2%
3aawA02 3.30.2130.10 Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like 0.62 44.0 3.51e-01 74.1% 84.8%
2qb7B02 3.10.310.20 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › DHHA2 domain 0.62 46.0 3.90e-01 80.2% 77.1%
1r6vA02 3.30.70.80 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Peptidase S8 propeptide/proteinase inhibitor I9 0.61 43.0 4.40e-01 79.0% 75.6%
3dxqA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.61 42.0 4.22e-01 71.6% 72.3%
3qugA00 2.60.40.1850 Mainly Beta › Sandwich › Immunoglobulin-like › 0.61 51.0 4.63e-01 93.8% 86.7%
2grvA02 3.90.76.10 Alpha Beta › Alpha-Beta Complex › Dipeptide-binding Protein; domain 1 › Dipeptide-binding Protein; Domain 1 0.61 47.0 4.19e-01 82.7% 93.8%
3sz6A00 2.60.40.1850 Mainly Beta › Sandwich › Immunoglobulin-like › 0.60 50.0 4.44e-01 92.6% 84.5%
4mtlA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.60 45.0 3.34e-01 80.2% 43.8%
5lohB01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.59 41.0 4.31e-01 72.8% 85.1%
1dd5A02 3.30.1360.40 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.58 43.0 4.45e-01 77.8% 93.3%
1ep3B01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.58 46.0 4.36e-01 85.2% 81.8%
7xc2A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 46.0 4.27e-01 88.9% 87.7%
4lecA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.58 44.0 3.29e-01 80.2% 43.6%
5mmjh01 3.30.1370.30 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.57 42.0 4.32e-01 77.8% 94.7%
4bzyA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 42.0 3.81e-01 79.0% 98.2%
7ovuA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.57 47.0 3.61e-01 91.4% 95.9%
7dvrA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 49.0 4.17e-01 100.0% 70.9%
3ly1D01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.57 42.0 3.67e-01 82.7% 50.4%
1rf6A01 3.65.10.10 Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain 0.56 44.0 3.27e-01 85.2% 85.7%
3t05A02 2.40.33.10 Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like 0.55 41.0 3.93e-01 80.2% 74.2%
3qwuA03 3.30.70.2160 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.55 41.0 3.39e-01 77.8% 84.2%
2cpjA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.55 37.0 3.53e-01 70.4% 78.8%
4krgA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.55 39.0 2.81e-01 75.3% 41.8%
3kepA00 3.30.1610.10 Alpha Beta › 2-Layer Sandwich › c-terminal autoproteolytic domain of nucleoporin nup98 › Peptidase S59, nucleoporin 0.55 38.0 3.13e-01 71.6% 81.2%
2gukA00 3.30.2190.10 Alpha Beta › 2-Layer Sandwich › PG1857-like › PG1857-like 0.55 40.0 3.58e-01 76.5% 82.9%
2f9jA01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.54 37.0 3.78e-01 71.6% 81.2%
3bpvA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 46.0 3.98e-01 98.8% 70.1%
1fg7A02 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.54 41.0 3.60e-01 82.7% 51.9%
3pf2A01 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 40.0 3.22e-01 81.5% 79.4%
1whvA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.54 37.0 3.50e-01 71.6% 86.0%
3p1tA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.54 41.0 3.62e-01 82.7% 55.7%
3en9A03 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.54 36.0 3.81e-01 70.4% 100.0%
1b4bA00 3.30.1360.40 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.54 41.0 4.41e-01 85.2% 95.8%
1p4xA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 45.0 4.00e-01 98.8% 81.3%
3afgB01 3.30.70.80 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Peptidase S8 propeptide/proteinase inhibitor I9 0.52 39.0 3.83e-01 80.2% 83.9%
2fbhA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 44.0 3.81e-01 100.0% 71.5%
2dpmA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 34.0 2.78e-01 71.6% 34.8%
4glkA00 3.10.129.130 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › 0.51 41.0 3.38e-01 93.8% 89.1%
2o8eA01 3.40.1170.10 Alpha Beta › 3-Layer(aba) Sandwich › MutS, DNA mismatch repair protein, domain I › DNA repair protein MutS, domain I 0.50 39.0 3.50e-01 86.4% 74.4%
3l7wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 42.0 3.98e-01 98.8% 86.7%
1jg5A00 3.30.1410.10 Alpha Beta › 2-Layer Sandwich › Gtp Cyclohydrolase I Feedback Regulatory Protein; Chain: K › GTP cyclohydrolase I feedback regulatory protein GFRP 0.50 38.0 3.87e-01 87.7% 84.3%
1t82A00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.50 37.0 3.09e-01 77.8% 69.0%
ECOD (54)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1159603 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.76 64.0 6.49e-01 92.6% 95.1%
4618987 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.75 65.0 5.58e-01 93.8% 73.6%
5022354 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.74 62.0 6.39e-01 90.1% 98.7%
4994373 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.74 60.0 6.27e-01 87.7% 96.0%
5027652 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.74 62.0 5.93e-01 92.6% 97.9%
5012700 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.74 62.0 6.17e-01 91.4% 94.1%
5013983 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.74 62.0 5.47e-01 92.6% 72.5%
3173041 242.1.1.1 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 0.73 61.0 5.31e-01 92.6% 72.8%
3205225 242.1.1.1 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 0.72 61.0 5.52e-01 92.6% 72.7%
3602223 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.72 60.0 5.73e-01 91.4% 80.0%
3206012 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.72 61.0 5.67e-01 92.6% 79.0%
5028300 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.70 62.0 6.11e-01 96.3% 96.5%
3738330 242.1.1.1 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 0.70 58.0 4.86e-01 92.6% 65.0%
5023789 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.69 60.0 5.97e-01 96.3% 96.5%
4938255 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.69 57.0 5.82e-01 91.4% 93.8%
4995013 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.68 52.0 5.15e-01 87.7% 78.6%
4978366 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.67 48.0 5.17e-01 75.3% 87.1%
5051463 304.54.1.0 a+b two layers › Alpha-beta plaits › CcmK-like › CcmK-like 0.66 46.0 4.67e-01 72.8% 82.5%
4937614 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.66 55.0 4.55e-01 92.6% 60.7%
4958446 241.9.1.0 a+b two layers › Type III secretory system chaperone-like › YdhG-like › YdhG-like 0.60 44.0 3.93e-01 79.0% 71.7%
None 0.60 46.0 3.37e-01 81.5% 94.9%
3600137 213.1.1.0 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.60 48.0 3.64e-01 86.4% 95.3%
4098159 601.23.1.0 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III 0.58 38.0 2.65e-01 75.3% 19.3%
3217048 213.1.1.25 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_3 0.58 49.0 3.68e-01 92.6% 93.5%
None 0.58 49.0 3.66e-01 92.6% 90.6%
3702222 213.1.1.25 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_3 0.57 48.0 3.56e-01 92.6% 93.0%
3967945 2003.1.5.106 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › DUF6231 0.57 42.0 3.42e-01 77.8% 54.8%
3914268 304.9.1.1 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 0.57 39.0 3.58e-01 71.6% 52.7%
4948586 304.7.1.6 a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › Tk-SP_N-pro 0.57 39.0 3.87e-01 70.4% 78.8%
4270026 601.23.1.0 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III 0.57 37.0 2.61e-01 75.3% 19.3%
4258900 3016.1.1.0 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.56 42.0 4.19e-01 80.2% 77.1%
4402752 309.1.2.2 a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › ThrRS/AlaRS editing domain › tRNA_bind_4 0.56 40.0 3.25e-01 75.3% 92.5%
4927083 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.55 45.0 4.34e-01 92.6% 91.5%
4213592 3016.1.1.1 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_1_2 0.55 42.0 4.01e-01 82.7% 68.4%
3288007 3016.1.1.0 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.55 41.0 4.31e-01 82.7% 86.7%
3781988 304.9.1.1 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 0.55 38.0 3.70e-01 71.6% 66.3%
3575946 213.1.1.25 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_3 0.55 47.0 3.63e-01 95.1% 62.7%
4542099 3016.1.1.1 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_1_2 0.55 40.0 4.10e-01 77.8% 82.1%
1193604 3016.1.1.1 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_1_2 0.55 41.0 3.91e-01 81.5% 67.7%
3470093 3696.1.1.1 a+b two layers › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › HARP 0.55 40.0 4.41e-01 81.5% 98.5%
5081741 304.7.1.0 a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors 0.55 37.0 3.68e-01 70.4% 75.3%
4341252 3016.1.1.1 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_1_2 0.55 40.0 2.65e-01 77.8% 18.6%
5063797 304.165.1.0 a+b two layers › Alpha-beta plaits › Uncharacterized protein Ta1207 › Uncharacterized protein Ta1207 0.54 44.0 3.93e-01 92.6% 75.0%
4146208 3016.1.1.1 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_1_2 0.53 40.0 3.43e-01 82.7% 47.5%
3482424 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.53 38.0 3.96e-01 74.1% 97.3%
3593062 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.53 36.0 3.34e-01 71.6% 54.5%
5057619 2004.1.2.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › PEP carboxykinase catalytic C-terminal domain 0.53 44.0 3.21e-01 93.8% 45.0%
4561280 3016.1.1.0 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.53 41.0 3.83e-01 82.7% 70.0%
3476713 601.23.1.4 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III 0.53 41.0 2.80e-01 87.7% 21.2%
5011957 304.7.1.0 a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors 0.52 36.0 3.75e-01 71.6% 82.7%
5018031 304.128.1.0 a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB 0.52 36.0 3.32e-01 71.6% 100.0%
4507915 304.7.1.6 a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › Tk-SP_N-pro 0.52 38.0 3.55e-01 80.2% 66.4%
3508386 304.9.1.1 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 0.51 36.0 3.00e-01 76.5% 41.9%
3252239 304.9.1.1 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 0.50 34.0 3.49e-01 70.4% 78.7%
D8 medium residues 690-804
PDB
Domain cluster: representative
CATH (23)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1dfaA03 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.85 60.0 6.59e-01 72.2% 100.0%
8dy9I01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.83 64.0 5.20e-01 80.9% 86.4%
1dq3A04 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.82 65.0 6.58e-01 82.6% 95.6%
1ef0B02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.77 64.0 5.29e-01 87.0% 54.3%
1af5A00 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.76 54.0 5.27e-01 73.0% 84.9%
3c0wA02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.75 57.0 6.04e-01 79.1% 100.0%
4yhxA01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.75 55.0 5.13e-01 76.5% 78.7%
2dchX02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.74 59.0 6.04e-01 83.5% 99.1%
6vudA02 3.30.1360.40 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.74 41.0 5.03e-01 81.7% 84.0%
4efjA01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.72 54.0 5.06e-01 78.3% 77.1%
3e54A00 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.72 54.0 4.85e-01 79.1% 71.7%
2dt9A01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.62 37.0 4.36e-01 72.2% 90.5%
2pjdA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.58 36.0 3.29e-01 72.2% 45.5%
1lfwA03 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 36.0 4.08e-01 84.3% 83.0%
1zvpD00 3.30.2130.10 Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like 0.57 40.0 3.86e-01 72.2% 92.4%
3jamK00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 42.0 4.51e-01 76.5% 94.8%
4bpe700 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 42.0 4.43e-01 76.5% 90.1%
5xyiK00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 41.0 4.50e-01 76.5% 97.8%
2ln3A00 3.30.110.140 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › 0.55 35.0 3.99e-01 88.7% 88.0%
1zhvA00 3.30.2130.10 Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like 0.55 40.0 3.81e-01 75.7% 97.8%
5optn00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 39.0 4.24e-01 75.7% 94.6%
3thxB04 1.10.1420.10 Mainly Alpha › Orthogonal Bundle › MutS, DNA mismatch repair protein; Chain A, domain 3 › 0.52 31.0 3.07e-01 71.3% 50.8%
1gkxA01 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.51 36.0 3.29e-01 72.2% 70.2%
ECOD (44)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4943246 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.88 69.0 7.42e-01 80.9% 100.0%
4971395 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.88 64.0 7.06e-01 74.8% 100.0%
4997606 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.88 75.0 6.70e-01 89.6% 100.0%
5023543 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.87 69.0 7.37e-01 81.7% 100.0%
5022297 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.86 66.0 7.26e-01 79.1% 100.0%
5029542 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.86 66.0 6.91e-01 79.1% 100.0%
4979525 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.85 68.0 5.58e-01 83.5% 55.4%
4998393 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.85 68.0 6.94e-01 82.6% 99.1%
4993483 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.85 68.0 7.08e-01 82.6% 97.1%
4943233 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.84 67.0 7.16e-01 81.7% 100.0%
4930926 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.84 65.0 7.08e-01 79.1% 100.0%
3251998 242.1.1.1 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 0.83 57.0 6.03e-01 70.4% 91.4%
5029221 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.83 69.0 7.20e-01 86.1% 99.0%
4971000 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.83 63.0 6.79e-01 79.1% 98.0%
4626502 242.1.1.6 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_WhiA 0.82 64.0 6.23e-01 81.7% 80.0%
3205225 242.1.1.1 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 0.81 60.0 6.13e-01 75.7% 92.7%
3603293 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.81 65.0 6.55e-01 83.5% 99.1%
5057184 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.81 66.0 6.88e-01 84.3% 97.1%
4979632 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.81 65.0 5.51e-01 84.3% 100.0%
4474382 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.80 69.0 6.69e-01 90.4% 99.2%
3604140 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.80 71.0 5.90e-01 93.0% 63.2%
4934118 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.80 57.0 6.58e-01 76.5% 100.0%
5052155 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.79 68.0 5.78e-01 89.6% 100.0%
4580140 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.79 54.0 6.20e-01 76.5% 94.1%
5031485 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.78 69.0 6.16e-01 93.0% 100.0%
3667726 242.1.1.2 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_2 0.78 59.0 6.33e-01 79.1% 97.0%
3170512 242.1.1.2 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_2 0.77 61.0 6.27e-01 82.6% 94.5%
5066572 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.76 65.0 6.77e-01 92.2% 98.1%
4978265 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.75 63.0 5.54e-01 87.0% 100.0%
1159602 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.74 59.0 6.02e-01 83.5% 99.1%
4945934 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.74 57.0 5.75e-01 80.0% 87.8%
4993583 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.74 65.0 6.45e-01 93.0% 99.2%
4467389 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.71 47.0 4.84e-01 70.4% 70.9%
4997674 242.1.1.1 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 0.71 52.0 4.72e-01 77.4% 72.3%
3603433 242.4.1.2 a+b two layers › Homing endonucleases-like › DNA polymerase II large subunit DP2 central a+b domain › DNA polymerase II large subunit DP2 central a+b domain › PolC_DP2_central 0.60 45.0 4.51e-01 79.1% 90.8%
4962984 304.8.1.10 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_7 0.59 37.0 4.32e-01 73.0% 90.0%
3606618 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.58 38.0 4.28e-01 87.0% 85.6%
1432936 101.1.2.47 alpha arrays › HTH › HTH › winged helix domain › S10_plectin 0.58 42.0 4.45e-01 76.5% 88.5%
3781863 601.23.1.1 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_III 0.55 34.0 2.53e-01 70.4% 21.2%
4431621 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.54 42.0 3.83e-01 81.7% 81.3%
3639719 304.8.1.10 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_7 0.54 35.0 4.02e-01 73.0% 92.5%
3386748 225.1.1.3 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c 0.53 39.0 3.57e-01 76.5% 100.0%
3589362 225.1.1.9 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c_5 0.51 36.0 3.51e-01 73.9% 72.1%
3589189 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.50 35.0 3.45e-01 79.1% 66.4%