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gwa1_scaffold_0_prodigal-single.1__X__X__00385
Bact-Virgwa1_scaffold_0_prodigal-single.1__X__X__00385
Identity
- Kingdom:
- phage
Quality
66.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 25-92
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1sqgA01 | 1.10.940.10 | Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like | 0.59 | 42.0 | 3.36e-01 | 100.0% | 36.2% |
| 3ed5A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.59 | 41.0 | 3.86e-01 | 73.5% | 97.6% |
| 4lvpA00 | 1.10.418.70 | Mainly Alpha › Orthogonal Bundle › Actin-binding Protein, T-fimbrin; domain 1 › Intraflagellar transport protein 81, N-terminal domain | 0.59 | 46.0 | 3.90e-01 | 89.7% | 75.8% |
| 2l3wA01 | 1.10.3130.20 | Mainly Alpha › Orthogonal Bundle › serine acetyltransferase, domain 1 › Phycobilisome linker domain | 0.58 | 42.0 | 3.50e-01 | 91.2% | 42.2% |
| 4eekA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.58 | 40.0 | 4.13e-01 | 75.0% | 97.0% |
| 4ne4A01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.57 | 40.0 | 3.02e-01 | 92.6% | 29.9% |
| 1f5qB02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.55 | 44.0 | 3.61e-01 | 91.2% | 72.5% |
| 2p0tA02 | 1.10.60.30 | Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › PSPTO4464-like domains | 0.55 | 36.0 | 3.58e-01 | 100.0% | 62.5% |
| 3cx5A02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.54 | 49.0 | 3.39e-01 | 100.0% | 65.5% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5078841 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 54.0 | 5.09e-01 | 98.5% | 65.1% |
| 3174958 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.69 | 50.0 | 5.41e-01 | 94.1% | 94.5% |
| 4021919 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.67 | 54.0 | 5.51e-01 | 100.0% | 92.3% |
| 4927722 | 101.1.17.0 ↗ | alpha arrays › HTH › HTH › FF domain | 0.63 | 52.0 | 4.56e-01 | 95.6% | 84.5% |
| 5062284 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.63 | 48.0 | 4.05e-01 | 82.4% | 94.8% |
| 3824846 | 604.17.1.0 ↗ | alpha bundles › Spectrin repeat-like › MTH_863 C-terminal domain-like › MTH_863 C-terminal domain-like | 0.61 | 42.0 | 4.24e-01 | 100.0% | 71.4% |
| 3325322 | 532.2.1.0 ↗ | alpha arrays › Type III secretion system domain-like › Type III secretion system domains › Type III secretion system domains | 0.61 | 44.0 | 4.20e-01 | 98.5% | 65.0% |
| 4236132 | 3254.1.1.1 ↗ | alpha arrays › helical domain in flagellar biosynthesis protein flhA › helical domain in flagellar biosynthesis protein flhA › helical domain in flagellar biosynthesis protein flhA › FHIPEP | 0.60 | 35.0 | 3.21e-01 | 76.5% | 42.2% |
| 3398320 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.53 | 33.0 | 3.34e-01 | 83.8% | 60.0% |
| 4930837 | 139.2.1.4 ↗ | few secondary structure elements › Multiheme cytochromes › Di-heme elbow motif › Di-heme elbow motif › C_GCAxxG_C_C | 0.53 | 44.0 | 3.36e-01 | 95.6% | 86.5% |