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gwa1_scaffold_1_prodigal-single.1__X__X__00044
Bact-Virgwa1_scaffold_1_prodigal-single.1__X__X__00044
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-131
Domain cluster:
rep: NC_019411.1__YP_006989762.1__D870_gp029__00029__D112-215
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4pmwA04 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.80 | 28.0 | 3.39e-01 | 83.2% | 48.4% |
| 2xk0A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.76 | 33.0 | 4.48e-01 | 86.3% | 78.3% |
| 5i4eA01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.75 | 27.0 | 4.58e-01 | 77.1% | 95.7% |
| 6bhdA03 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 34.0 | 4.86e-01 | 80.2% | 92.1% |
| 4n4iA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 32.0 | 3.88e-01 | 72.5% | 64.4% |
| 1x6bA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.62 | 30.0 | 4.31e-01 | 84.7% | 96.9% |
| 4c5eC02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 37.0 | 4.21e-01 | 80.9% | 90.6% |
| 4g7nA02 | 3.30.1120.130 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.55 | 36.0 | 4.04e-01 | 95.4% | 87.6% |
| 2l1tA00 | 2.30.110.70 | Mainly Beta › Roll › Pnp Oxidase; Chain A › | 0.51 | 34.0 | 3.73e-01 | 84.0% | 81.7% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4997767 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.88 | 30.0 | 5.35e-01 | 79.4% | 95.6% |
| 3913334 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.78 | 33.0 | 4.57e-01 | 70.2% | 77.1% |
| 3914746 | 4.1.1.128 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_4 | 0.77 | 34.0 | 4.62e-01 | 77.9% | 78.6% |
| 3261395 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.77 | 33.0 | 5.01e-01 | 70.2% | 93.1% |
| 3875218 | 4.1.1.128 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_4 | 0.75 | 34.0 | 4.81e-01 | 74.8% | 87.7% |
| 4660107 | 4.1.1.238 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 | 0.75 | 35.0 | 5.19e-01 | 80.9% | 100.0% |
| 4357819 | 4.1.1.238 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 | 0.74 | 35.0 | 4.77e-01 | 84.0% | 85.7% |
| 4372288 | 4.1.1.238 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 | 0.73 | 35.0 | 5.06e-01 | 84.0% | 100.0% |
| 3712782 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 40.0 | 4.94e-01 | 74.8% | 88.7% |
| 3169607 | 4.1.1.238 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 | 0.71 | 38.0 | 4.88e-01 | 87.0% | 89.3% |
| 4629022 | 4.1.1.238 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 | 0.71 | 34.0 | 4.59e-01 | 80.9% | 85.7% |
| 3393319 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.70 | 36.0 | 3.97e-01 | 76.3% | 60.0% |
| 4098870 | 4.7.1.1 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 | 0.69 | 42.0 | 4.82e-01 | 91.6% | 82.1% |
| 3684908 | 4.1.1.238 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 | 0.69 | 38.0 | 4.88e-01 | 88.5% | 93.3% |
| 3896519 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 26.0 | 4.46e-01 | 78.6% | 100.0% |
| 3620554 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 39.0 | 4.58e-01 | 95.4% | 98.9% |
| 4386761 | 292.2.1.3 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › Plk4_PB2 | 0.56 | 37.0 | 4.15e-01 | 93.9% | 87.0% |
| None | — | 0.52 | 39.0 | 2.42e-01 | 100.0% | 13.3% | |
| 3931905 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 37.0 | 4.01e-01 | 83.2% | 87.0% |