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gwa1_scaffold_1_prodigal-single.1__X__X__00132
Bact-Virgwa1_scaffold_1_prodigal-single.1__X__X__00132
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 97-188
Domain cluster:
rep: MT740307.1__QNR53851.1__phiK7A1_063__00061__D140-222
CATH (28)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6o38A01 | 2.60.120.1230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.71 | 56.0 | 5.62e-01 | 96.7% | 83.7% |
| 3kq4B02 | 2.60.120.290 | Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain | 0.66 | 54.0 | 5.02e-01 | 89.1% | 90.7% |
| 6fzvD01 | 2.60.120.290 | Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain | 0.64 | 54.0 | 5.01e-01 | 93.5% | 91.5% |
| 3pnrB00 | 2.60.40.2020 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.63 | 50.0 | 4.50e-01 | 85.9% | 97.7% |
| 3t9wA01 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.61 | 52.0 | 4.53e-01 | 92.4% | 76.3% |
| 3g5wA02 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.61 | 50.0 | 4.11e-01 | 88.0% | 68.1% |
| 4fchA01 | 2.60.40.3620 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.60 | 53.0 | 5.03e-01 | 100.0% | 95.4% |
| 3kw8A02 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.59 | 49.0 | 4.34e-01 | 90.2% | 69.2% |
| 4f7kA01 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.59 | 47.0 | 4.32e-01 | 88.0% | 78.4% |
| 4knuA02 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.58 | 46.0 | 3.93e-01 | 88.0% | 86.2% |
| 2r7eA02 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.57 | 47.0 | 4.17e-01 | 90.2% | 79.6% |
| 1kzqA01 | 2.60.40.1320 | Mainly Beta › Sandwich › Immunoglobulin-like › SRS domain | 0.57 | 46.0 | 4.14e-01 | 88.0% | 95.3% |
| 3abgB03 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.57 | 46.0 | 3.72e-01 | 88.0% | 56.5% |
| 2uxtA03 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.56 | 46.0 | 4.15e-01 | 89.1% | 70.6% |
| 7z7vC01 | 3.30.460.80 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › NADH:ubiquinone oxidoreductase Nqo5 subunit | 0.56 | 40.0 | 3.62e-01 | 75.0% | 96.9% |
| 4bxsV03 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.56 | 45.0 | 3.06e-01 | 88.0% | 39.4% |
| 1sddB02 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.55 | 44.0 | 4.04e-01 | 88.0% | 79.2% |
| 4c4aA04 | 2.70.160.11 | Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 | 0.55 | 45.0 | 3.79e-01 | 90.2% | 62.7% |
| 2aanA00 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.55 | 43.0 | 4.01e-01 | 88.0% | 80.5% |
| 4f7kA02 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.54 | 45.0 | 3.95e-01 | 90.2% | 76.8% |
| 1gycA02 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.54 | 47.0 | 3.85e-01 | 98.9% | 94.4% |
| 3ppsA02 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.54 | 47.0 | 3.77e-01 | 96.7% | 94.5% |
| 2e6jA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 40.0 | 3.79e-01 | 79.3% | 72.3% |
| 3i6sA04 | 2.60.40.2310 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 43.0 | 4.09e-01 | 90.2% | 73.6% |
| 3sqrA02 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.52 | 45.0 | 3.59e-01 | 96.7% | 95.3% |
| 2wyhB06 | 2.70.98.30 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 | 0.52 | 43.0 | 3.16e-01 | 94.6% | 68.9% |
| 6lbrA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.50 | 43.0 | 3.43e-01 | 96.7% | 67.0% |
| 7rpyA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 44.0 | 4.31e-01 | 100.0% | 94.2% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3244629 | 10.4.1.1 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB | 0.68 | 56.0 | 4.97e-01 | 90.2% | 81.5% |
| 3244928 | 10.4.1.0 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain | 0.66 | 56.0 | 4.95e-01 | 93.5% | 91.7% |
| 3928020 | 10.4.1.1 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB | 0.66 | 56.0 | 5.25e-01 | 93.5% | 94.8% |
| 3628458 | 10.4.1.0 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain | 0.66 | 53.0 | 5.02e-01 | 88.0% | 98.2% |
| 3390403 | 10.4.1.0 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain | 0.65 | 54.0 | 4.58e-01 | 93.5% | 91.9% |
| 3510362 | 10.4.1.1 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB | 0.64 | 52.0 | 5.05e-01 | 90.2% | 94.3% |
| 3398157 | 10.4.1.0 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain | 0.63 | 54.0 | 4.38e-01 | 94.6% | 96.1% |
| 4024284 | 11.1.1.162 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Inhibitor_I71 | 0.63 | 50.0 | 4.43e-01 | 87.0% | 97.1% |
| 3916660 | 10.4.1.22 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB_CDCP1_2 | 0.63 | 52.0 | 4.63e-01 | 90.2% | 80.0% |
| 3969978 | 3156.1.1.9 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › Cu-oxidase_3 | 0.62 | 51.0 | 4.55e-01 | 90.2% | 74.6% |
| 3227518 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.61 | 50.0 | 4.77e-01 | 90.2% | 85.5% |
| 5041578 | 3156.1.1.9 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › Cu-oxidase_3 | 0.61 | 48.0 | 3.35e-01 | 88.0% | 30.4% |
| 4985230 | 11.1.1.1427 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7524 | 0.59 | 48.0 | 4.45e-01 | 87.0% | 77.4% |
| 4363321 | 3156.1.1.0 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related | 0.58 | 48.0 | 4.13e-01 | 89.1% | 78.6% |
| 3507757 | 11.1.1.385 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ASH | 0.58 | 46.0 | 4.19e-01 | 85.9% | 63.2% |
| 5038919 | 3156.1.1.9 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › Cu-oxidase_3 | 0.58 | 51.0 | 4.43e-01 | 100.0% | 89.7% |
| 4285426 | 3156.1.1.0 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related | 0.57 | 46.0 | 3.82e-01 | 88.0% | 72.7% |
| 3749560 | 3156.1.1.0 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related | 0.56 | 44.0 | 2.95e-01 | 89.1% | 50.4% |
| 4542712 | 3698.1.1.2 ↗ | beta sandwiches › Arginine methyltransferase oligomerization subdomain › Arginine methyltransferase oligomerization subdomain › Arginine methyltransferase oligomerization subdomain › PRMT_C | 0.55 | 45.0 | 3.57e-01 | 91.3% | 81.5% |
| 3412366 | 3156.1.1.4 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › Cu-oxidase | 0.54 | 47.0 | 3.74e-01 | 100.0% | 96.9% |
| 3869391 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 43.0 | 4.21e-01 | 89.1% | 83.0% |
| 3715019 | 11.1.1.360 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › HYDIN_VesB_CFA65-like_Ig | 0.51 | 39.0 | 3.80e-01 | 83.7% | 75.0% |
| 5039414 | 3156.1.1.0 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related | 0.50 | 42.0 | 3.81e-01 | 95.7% | 76.9% |
D2
high
residues 196-240
Domain cluster:
representative
CATH (33)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6dq2A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.67 | 53.0 | 3.32e-01 | 91.1% | 47.3% |
| 2p13A00 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.65 | 51.0 | 4.26e-01 | 91.1% | 62.4% |
| 4maaA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.65 | 54.0 | 3.74e-01 | 100.0% | 30.0% |
| 2oaiA00 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.64 | 49.0 | 4.18e-01 | 86.7% | 55.0% |
| 5a0tB01 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.64 | 50.0 | 3.10e-01 | 91.1% | 29.4% |
| 4perB00 | 3.10.130.10 | Alpha Beta › Roll › P-30 Protein › Ribonuclease A-like domain | 0.63 | 51.0 | 4.04e-01 | 100.0% | 76.1% |
| 6n36A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.63 | 48.0 | 3.05e-01 | 91.1% | 46.4% |
| 2nqwA00 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.62 | 51.0 | 4.17e-01 | 93.3% | 58.6% |
| 5wcmA00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.62 | 48.0 | 3.05e-01 | 91.1% | 46.4% |
| 2p4pA00 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.62 | 50.0 | 4.14e-01 | 91.1% | 61.9% |
| 1u04A04 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.62 | 46.0 | 2.99e-01 | 88.9% | 17.0% |
| 2kgyA00 | 3.30.505.20 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › | 0.61 | 50.0 | 4.14e-01 | 100.0% | 65.2% |
| 2o3gA00 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.61 | 47.0 | 4.09e-01 | 88.9% | 60.5% |
| 3laeA00 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.60 | 47.0 | 4.02e-01 | 91.1% | 63.0% |
| 4m0hA01 | 2.60.120.1440 | Mainly Beta › Sandwich › Jelly Rolls › | 0.60 | 50.0 | 3.66e-01 | 100.0% | 43.2% |
| 1yueA02 | 2.10.10.40 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › | 0.59 | 49.0 | 4.54e-01 | 100.0% | 95.1% |
| 1k07A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.59 | 45.0 | 2.90e-01 | 91.1% | 47.3% |
| 2rtsA00 | 2.10.10.20 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › Carbohydrate-binding module superfamily 5/12 | 0.59 | 49.0 | 4.31e-01 | 100.0% | 63.0% |
| 2q07A03 | 2.30.130.10 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain | 0.58 | 46.0 | 4.21e-01 | 97.8% | 95.5% |
| 1wvvB01 | 2.10.10.20 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › Carbohydrate-binding module superfamily 5/12 | 0.58 | 48.0 | 4.79e-01 | 100.0% | 93.8% |
| 1goiB03 | 2.10.10.20 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › Carbohydrate-binding module superfamily 5/12 | 0.57 | 48.0 | 4.69e-01 | 100.0% | 88.2% |
| 4xpmB00 | 3.40.1840.10 | Alpha Beta › 3-Layer(aba) Sandwich › Profilin-like › YNR034W-A-like | 0.57 | 43.0 | 3.94e-01 | 88.9% | 61.2% |
| 3wx7A02 | 2.10.10.90 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › | 0.56 | 47.0 | 3.78e-01 | 97.8% | 49.5% |
| 3pnrB00 | 2.60.40.2020 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 41.0 | 3.05e-01 | 82.2% | 86.8% |
| 3fhlA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.56 | 40.0 | 2.76e-01 | 80.0% | 71.7% |
| 1ed7A00 | 2.10.10.20 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › Carbohydrate-binding module superfamily 5/12 | 0.55 | 44.0 | 4.42e-01 | 93.3% | 100.0% |
| 5eowA00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.54 | 45.0 | 2.73e-01 | 100.0% | 40.8% |
| 1xg9A02 | 3.10.25.20 | Alpha Beta › Roll › Methionyl-tRNA Fmet Formyltransferase; Chain A, domain 2 › | 0.54 | 45.0 | 4.18e-01 | 100.0% | 88.7% |
| 2ogqA01 | 3.30.1120.30 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain | 0.54 | 39.0 | 2.88e-01 | 80.0% | 51.6% |
| 1aiwA00 | 2.10.10.20 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › Carbohydrate-binding module superfamily 5/12 | 0.53 | 45.0 | 4.12e-01 | 100.0% | 87.1% |
| 2qa1A02 | 3.30.70.2450 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 36.0 | 3.16e-01 | 82.2% | 41.8% |
| 4umwA04 | 3.40.1110.10 | Alpha Beta › 3-Layer(aba) Sandwich › Calcium-transporting ATPase, cytoplasmic domain N › Calcium-transporting ATPase, cytoplasmic domain N | 0.51 | 40.0 | 3.06e-01 | 91.1% | 73.3% |
| 4v19S00 | 3.30.420.80 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribosomal protein S11/S14 | 0.51 | 34.0 | 2.57e-01 | 73.3% | 24.5% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4946931 | 247.1.1.0 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase | 0.65 | 51.0 | 3.26e-01 | 91.1% | 56.0% |
| 4074370 | 217.2.1.1 ↗ | a+b complex topology › FAD-binding domain-like › CorC/HlyC domain-like › CorC/HlyC domain-like › CorC_HlyC | 0.63 | 48.0 | 4.09e-01 | 86.7% | 55.0% |
| 4930189 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.63 | 51.0 | 4.77e-01 | 100.0% | 90.0% |
| 3730303 | 247.1.1.1 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B | 0.63 | 49.0 | 3.22e-01 | 91.1% | 47.0% |
| 7163 | 217.2.1.1 ↗ | a+b complex topology › FAD-binding domain-like › CorC/HlyC domain-like › CorC/HlyC domain-like › CorC_HlyC | 0.62 | 50.0 | 4.17e-01 | 91.1% | 63.4% |
| 4008466 | 217.2.1.1 ↗ | a+b complex topology › FAD-binding domain-like › CorC/HlyC domain-like › CorC/HlyC domain-like › CorC_HlyC | 0.62 | 49.0 | 4.01e-01 | 91.1% | 55.6% |
| 4021388 | 247.1.1.1 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B | 0.62 | 49.0 | 3.07e-01 | 93.3% | 46.2% |
| 3965093 | 217.2.1.0 ↗ | a+b complex topology › FAD-binding domain-like › CorC/HlyC domain-like › CorC/HlyC domain-like | 0.62 | 49.0 | 4.20e-01 | 91.1% | 66.7% |
| 4035765 | 6043.2.1.0 ↗ | a+b two layers › yfeY-like › Teichoic acid transporter subunit TagH C-terminal domain › Teichoic acid transporter subunit TagH C-terminal domain | 0.60 | 49.0 | 3.63e-01 | 95.6% | 99.2% |
| 5051542 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.60 | 46.0 | 3.10e-01 | 88.9% | 21.1% |
| 3189021 | 874.1.1.0 ↗ | a+b duplicates or obligate multimers › Smc hinge domain › Smc hinge domain › Smc hinge domain | 0.59 | 50.0 | 2.90e-01 | 100.0% | 10.3% |
| 1002430 | 64.3.1.0 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain | 0.59 | 49.0 | 4.54e-01 | 100.0% | 95.1% |
| 2389402 | 64.3.1.0 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain | 0.57 | 48.0 | 4.59e-01 | 100.0% | 83.3% |
| 3519410 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.57 | 43.0 | 4.51e-01 | 88.9% | 94.9% |
| 4923788 | 11.1.1.240 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Cadherin_4 | 0.55 | 40.0 | 3.38e-01 | 82.2% | 62.8% |
| 3273355 | 73.1.1.0 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain | 0.55 | 42.0 | 3.56e-01 | 88.9% | 60.0% |
| 3994068 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.55 | 47.0 | 2.86e-01 | 97.8% | 92.0% |
| 2771601 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.54 | 45.0 | 2.78e-01 | 100.0% | 83.4% |
| 3485597 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.54 | 43.0 | 2.62e-01 | 95.6% | 29.9% |
| 4966211 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.54 | 46.0 | 3.33e-01 | 100.0% | 66.9% |
| 3514491 | 5.1.4.242 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PEP5_VPS11_N | 0.53 | 39.0 | 2.42e-01 | 95.6% | 21.8% |
| 4546532 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.52 | 39.0 | 3.26e-01 | 97.8% | 91.4% |
| 119237 | 3112.1.1.1 ↗ | beta barrels › Uncharacterized protein Dsy0195 › Uncharacterized protein Dsy0195 › Uncharacterized protein Dsy0195 › YabP | 0.51 | 37.0 | 3.38e-01 | 80.0% | 81.8% |
| 140636 | 5.1.4.12 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema | 0.50 | 43.0 | 2.55e-01 | 97.8% | 36.4% |
| 4666485 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.50 | 38.0 | 3.19e-01 | 100.0% | 91.4% |
D3
medium
residues 7-49
Domain cluster:
rep: ALT_07252016_14_scaffold_0_prodigal-single.1__X__X__00375__D1-58
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1qydA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.75 | 50.0 | 3.17e-01 | 95.3% | 15.2% |
| 7odyC01 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.74 | 56.0 | 4.41e-01 | 83.7% | 42.4% |
| 3gdgA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.70 | 56.0 | 3.46e-01 | 100.0% | 15.4% |
| 4uavA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.67 | 62.0 | 4.81e-01 | 100.0% | 81.2% |
| 4r8zA00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.64 | 51.0 | 3.34e-01 | 100.0% | 18.8% |
| 5lqdD01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.63 | 54.0 | 3.34e-01 | 95.3% | 20.4% |
| 2qwvA00 | 3.40.1280.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain | 0.62 | 53.0 | 3.54e-01 | 100.0% | 97.3% |
| 5jjxA01 | 1.25.40.1040 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.62 | 51.0 | 3.14e-01 | 95.3% | 26.9% |
| 1b8pA02 | 3.90.110.10 | Alpha Beta › Alpha-Beta Complex › L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2 › Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal | 0.62 | 49.0 | 3.43e-01 | 100.0% | 80.8% |
| 7mdhA02 | 3.90.110.10 | Alpha Beta › Alpha-Beta Complex › L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2 › Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal | 0.61 | 52.0 | 3.48e-01 | 97.7% | 100.0% |
| 1suiA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.56 | 45.0 | 2.91e-01 | 95.3% | 17.2% |
| 3m5bA00 | 3.30.710.10 | Alpha Beta › 2-Layer Sandwich › Potassium Channel Kv1.1; Chain A › Potassium Channel Kv1.1; Chain A | 0.54 | 36.0 | 2.78e-01 | 72.1% | 44.0% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3593933 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.78 | 65.0 | 4.39e-01 | 90.7% | 90.0% |
| 3746144 | 192.29.1.273 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › NICE-3 | 0.78 | 61.0 | 5.30e-01 | 86.0% | 61.5% |
| 2390431 | 4166.1.1.1 ↗ | beta sandwiches › Lactophage receptor-binding protein N-terminal domain-like › Lactophage receptor-binding protein N-terminal domain-like › Lactophage receptor-binding protein N-terminal domain-like › T6SS_VasE | 0.74 | 57.0 | 3.77e-01 | 90.7% | 19.9% |
| 3473301 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.73 | 66.0 | 4.45e-01 | 100.0% | 28.7% |
| 3980438 | 4166.1.1.1 ↗ | beta sandwiches › Lactophage receptor-binding protein N-terminal domain-like › Lactophage receptor-binding protein N-terminal domain-like › Lactophage receptor-binding protein N-terminal domain-like › T6SS_VasE | 0.71 | 56.0 | 3.67e-01 | 90.7% | 19.5% |
| 4618209 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.69 | 61.0 | 3.71e-01 | 100.0% | 22.5% |
| 4520394 | 5063.1.1.1 ↗ | alpha bundles › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › PSI_PSAK | 0.69 | 63.0 | 5.29e-01 | 100.0% | 72.5% |
| 3972353 | 503.1.1.0 ↗ | extended segments › N-terminal domain of bifunctional PutA protein › N-terminal domain of bifunctional PutA protein › N-terminal domain of bifunctional PutA protein | 0.63 | 51.0 | 3.91e-01 | 100.0% | 39.2% |