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gwa1_scaffold_1_prodigal-single.1__X__X__00168

Bact-Vir

gwa1_scaffold_1_prodigal-single.1__X__X__00168

Identity

Kingdom:
phage

Quality

96.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-69
PDB
CATH (44)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4ytlA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.89 63.0 7.27e-01 95.5% 98.0%
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.85 62.0 6.15e-01 100.0% 73.9%
3h8zA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.81 58.0 6.01e-01 97.0% 78.1%
2e70A00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.81 59.0 5.85e-01 98.5% 71.8%
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.81 54.0 6.08e-01 91.0% 88.5%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.81 53.0 6.17e-01 94.0% 93.8%
2e6zA00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.80 60.0 6.42e-01 100.0% 89.8%
2vb6A01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.80 54.0 6.02e-01 91.0% 87.0%
4n4iA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.80 55.0 4.93e-01 92.5% 53.3%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.79 57.0 5.57e-01 98.5% 69.9%
6bhdA03 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.77 58.0 5.94e-01 100.0% 84.1%
2jngA00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.77 61.0 5.86e-01 100.0% 74.0%
5i4eA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.76 49.0 5.64e-01 88.1% 95.7%
4c5eC02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.72 56.0 4.92e-01 100.0% 58.3%
1wjrA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.71 58.0 4.72e-01 100.0% 47.2%
7afrX02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.71 56.0 5.88e-01 100.0% 96.7%
3ceyB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 59.0 4.61e-01 100.0% 44.0%
3feoB02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.69 55.0 5.10e-01 100.0% 68.7%
1y71A00 2.30.30.430 Mainly Beta › Roll › SH3 type barrels. › Kinase associated protein B domain 0.69 60.0 4.99e-01 98.5% 56.9%
1vq8Q00 2.30.30.70 Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 0.68 60.0 5.32e-01 100.0% 67.4%
1lckA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 53.0 5.60e-01 91.0% 94.9%
2cudA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 54.0 5.08e-01 92.5% 72.2%
1mv3A01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 56.0 5.49e-01 94.0% 97.3%
1x6bA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 53.0 5.47e-01 92.5% 90.6%
2rqrA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 53.0 4.32e-01 92.5% 48.7%
3fb9B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.65 56.0 5.19e-01 100.0% 75.0%
2gs5A01 3.40.1740.10 Alpha Beta › 3-Layer(aba) Sandwich › VC0467-like › VC0467-like 0.65 56.0 4.09e-01 97.0% 76.6%
1ib8A02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.64 53.0 5.38e-01 100.0% 92.5%
4f88102 3.90.1720.60 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › 0.64 57.0 3.98e-01 100.0% 31.9%
2rm4A01 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.63 53.0 5.38e-01 98.5% 95.5%
2dl5A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 53.0 5.02e-01 97.0% 78.2%
2ew0A00 3.40.1740.10 Alpha Beta › 3-Layer(aba) Sandwich › VC0467-like › VC0467-like 0.63 55.0 4.06e-01 98.5% 81.1%
2vobB02 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.60 54.0 3.77e-01 100.0% 36.9%
4c0fC00 2.30.30.1020 Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain 0.59 46.0 3.93e-01 91.0% 50.9%
4c0dB00 2.30.30.1020 Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain 0.59 46.0 3.35e-01 91.0% 29.8%
4i86A00 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.59 49.0 4.23e-01 89.6% 74.5%
3h41A02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.58 48.0 4.83e-01 89.6% 88.2%
1wczA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.57 49.0 4.09e-01 94.0% 68.7%
2kr0A01 2.30.29.70 Mainly Beta › Roll › PH-domain like › Proteasomal ubiquitin receptor Rpn13/ADRM1 0.54 44.0 3.79e-01 94.0% 77.0%
3k67A00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.53 44.0 3.39e-01 91.0% 80.1%
1gutA00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.51 35.0 3.57e-01 80.6% 73.1%
2l5pA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.51 42.0 3.28e-01 100.0% 66.9%
3s6pA03 2.60.270.70 Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › 0.51 42.0 3.44e-01 100.0% 87.3%
2ztnA02 2.40.30.190 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.50 41.0 3.40e-01 100.0% 69.5%
ECOD (86)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4321173 4.1.1.98 beta barrels › SH3 › SH3 › SH3 › ProQ_C 0.87 62.0 6.70e-01 100.0% 86.2%
4084190 4.1.1.98 beta barrels › SH3 › SH3 › SH3 › ProQ_C 0.87 62.0 6.61e-01 100.0% 84.7%
3428486 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.85 61.0 5.72e-01 100.0% 62.5%
3817476 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.84 58.0 6.66e-01 97.0% 96.0%
4000280 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.82 60.0 6.58e-01 98.5% 92.7%
3649741 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.81 59.0 5.68e-01 100.0% 68.0%
3238405 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.80 58.0 6.39e-01 98.5% 92.7%
3214653 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.80 64.0 5.67e-01 97.0% 61.1%
3414063 4.1.1.233 beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N 0.78 60.0 6.52e-01 97.0% 98.2%
4027422 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.78 56.0 6.09e-01 98.5% 90.9%
3928136 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.78 65.0 6.83e-01 100.0% 98.3%
3274701 4.1.1.239 beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O 0.77 61.0 6.42e-01 95.5% 91.7%
3933788 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.77 61.0 6.44e-01 100.0% 95.0%
5033600 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.75 52.0 5.88e-01 94.0% 98.0%
4319097 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.75 56.0 6.00e-01 100.0% 91.4%
3934126 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.75 61.0 6.46e-01 100.0% 98.3%
3839042 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 47.0 5.47e-01 89.6% 95.6%
3354076 4.1.1.330 beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O, SH3-C_UBE2O 0.74 68.0 5.39e-01 100.0% 53.8%
4210485 4.1.1.303 beta barrels › SH3 › SH3 › SH3 › SH3_retrovirus 0.73 56.0 5.75e-01 100.0% 84.6%
4032729 4.1.1.168 beta barrels › SH3 › SH3 › SH3 › DUF2187 0.73 57.0 6.15e-01 100.0% 96.6%
3591670 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 55.0 6.04e-01 92.5% 98.2%
3553983 4.1.1.233 beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N 0.73 58.0 6.15e-01 100.0% 96.7%
3669494 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.71 65.0 4.89e-01 100.0% 44.0%
3929373 4.1.1.233 beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N 0.71 59.0 6.20e-01 100.0% 100.0%
3459099 4.1.1.158 beta barrels › SH3 › SH3 › SH3 › DUF3444 0.70 63.0 5.44e-01 100.0% 71.4%
3313139 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.70 65.0 4.67e-01 100.0% 46.3%
3645395 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.70 64.0 5.96e-01 98.5% 96.2%
3356605 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.70 64.0 5.78e-01 100.0% 86.7%
3672735 4.1.1.303 beta barrels › SH3 › SH3 › SH3 › SH3_retrovirus 0.69 56.0 5.72e-01 100.0% 89.2%
4598590 4.1.1.303 beta barrels › SH3 › SH3 › SH3 › SH3_retrovirus 0.69 56.0 5.51e-01 100.0% 82.9%
3595169 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 61.0 6.03e-01 95.5% 92.9%
3642001 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.69 62.0 6.14e-01 97.0% 91.4%
3217772 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 62.0 5.70e-01 97.0% 90.6%
3342814 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.69 63.0 5.56e-01 100.0% 83.2%
3170404 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 55.0 4.80e-01 100.0% 58.0%
3176333 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 55.0 5.62e-01 100.0% 89.2%
3515762 4.1.1.303 beta barrels › SH3 › SH3 › SH3 › SH3_retrovirus 0.69 58.0 5.63e-01 100.0% 82.7%
3710131 4.7.1.0 beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 0.68 63.0 4.77e-01 98.5% 60.4%
3185321 4.1.1.51 beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.68 63.0 6.04e-01 100.0% 90.7%
3789647 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 63.0 4.72e-01 100.0% 43.9%
3437523 4.1.1.303 beta barrels › SH3 › SH3 › SH3 › SH3_retrovirus 0.68 55.0 5.43e-01 100.0% 82.9%
3924375 4.1.1.237 beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.68 63.0 6.04e-01 100.0% 89.3%
3494307 4.1.1.34 beta barrels › SH3 › SH3 › SH3 › MBT 0.68 58.0 4.67e-01 100.0% 49.6%
3240407 4.1.1.237 beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.68 63.0 6.25e-01 100.0% 95.7%
3807651 4.1.1.158 beta barrels › SH3 › SH3 › SH3 › DUF3444 0.68 61.0 5.18e-01 100.0% 72.7%
3879216 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 58.0 5.59e-01 92.5% 93.3%
3611989 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 62.0 4.67e-01 98.5% 58.0%
4283343 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.68 61.0 5.76e-01 100.0% 87.5%
3928050 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 60.0 4.67e-01 100.0% 47.4%
3941170 4.1.1.237 beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.67 62.0 6.13e-01 100.0% 95.7%
3627859 4.1.1.237 beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.67 62.0 5.94e-01 100.0% 89.3%
3706000 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.67 56.0 5.38e-01 91.0% 89.3%
3268160 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 61.0 5.46e-01 98.5% 83.3%
2726885 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 62.0 5.09e-01 100.0% 92.0%
3812216 4.1.1.303 beta barrels › SH3 › SH3 › SH3 › SH3_retrovirus 0.66 53.0 5.22e-01 100.0% 82.9%
3662854 4.1.1.187 beta barrels › SH3 › SH3 › SH3 › DIRP 0.66 61.0 4.46e-01 100.0% 42.4%
3180573 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 59.0 5.25e-01 100.0% 78.9%
4024240 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 59.0 5.49e-01 100.0% 81.2%
4251101 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 58.0 5.41e-01 100.0% 81.2%
3995388 4.1.1.34 beta barrels › SH3 › SH3 › SH3 › MBT 0.65 58.0 4.77e-01 100.0% 61.7%
1746358 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 60.0 5.01e-01 100.0% 93.5%
4596087 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.65 58.0 5.58e-01 100.0% 92.0%
4625654 4.1.1.445 beta barrels › SH3 › SH3 › SH3 › Spore_GerQ 0.65 54.0 5.26e-01 100.0% 84.0%
2625578 219.1.1.163 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › PF31135 0.64 56.0 4.48e-01 100.0% 60.0%
3631165 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 58.0 5.36e-01 100.0% 83.5%
3587906 4.1.1.46 beta barrels › SH3 › SH3 › SH3 › VEG 0.64 57.0 5.42e-01 100.0% 83.7%
3592525 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 58.0 4.83e-01 98.5% 69.1%
3719783 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.63 55.0 4.95e-01 98.5% 83.0%
3387378 4.1.1.13 beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.63 58.0 5.31e-01 100.0% 81.2%
4101587 4.1.1.140 beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.63 58.0 4.94e-01 100.0% 94.3%
4398865 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.63 53.0 4.72e-01 92.5% 86.3%
4083915 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.63 53.0 5.15e-01 100.0% 84.0%
3784612 219.1.1.115 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › AIM3_BBC1_C 0.62 55.0 4.07e-01 98.5% 43.5%
4484974 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.61 55.0 5.08e-01 100.0% 81.2%
3241890 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.61 53.0 4.63e-01 100.0% 64.0%
4587509 4113.1.1.1 beta barrels › VC0467-like › VC0467-like › VC0467-like › DUF179 0.61 51.0 3.73e-01 94.0% 77.7%
5040907 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.59 51.0 3.48e-01 94.0% 36.5%
None 0.58 50.0 3.45e-01 94.0% 36.4%
4937587 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.58 51.0 3.84e-01 100.0% 44.2%
4457262 1.1.5.25 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.58 51.0 4.26e-01 95.5% 87.3%
None 0.57 49.0 3.41e-01 94.0% 36.7%
3236373 1.1.5.49 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF316 0.57 48.0 3.20e-01 94.0% 34.4%
3621272 708.1.1.16 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › RYYR-CCHC 0.56 43.0 3.53e-01 86.6% 43.7%
4247805 1.1.5.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin 0.56 48.0 3.34e-01 94.0% 39.8%
3619225 708.1.1.16 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › RYYR-CCHC 0.55 45.0 3.39e-01 92.5% 35.0%
3415428 1.1.7.69 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › MOV-10_beta-barrel 0.50 43.0 3.74e-01 100.0% 61.9%