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gwa1_scaffold_1_prodigal-single.1__X__X__00196
Bact-Virgwa1_scaffold_1_prodigal-single.1__X__X__00196
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 63-140
Domain cluster:
rep: gwa1_scaffold_1_prodigal-single.1__X__X__00237__D109-187
D2
medium
residues 1-54
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ffvB04 | 3.30.365.10 | Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain | 0.61 | 48.0 | 3.37e-01 | 90.7% | 65.2% |
| 4x0qA04 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.58 | 41.0 | 3.04e-01 | 72.2% | 78.5% |
| 4jn3A01 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.56 | 40.0 | 2.76e-01 | 75.9% | 66.0% |
| 5y6iA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 38.0 | 3.44e-01 | 85.2% | 53.4% |
| 6sziB01 | 3.20.20.470 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glucansucrase | 0.54 | 44.0 | 2.76e-01 | 100.0% | 36.0% |
| 4i92A02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.53 | 46.0 | 3.19e-01 | 98.1% | 74.6% |
| 4jj9C00 | 3.30.429.10 | Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor | 0.53 | 43.0 | 3.21e-01 | 90.7% | 87.6% |
| 5tjjA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 37.0 | 3.39e-01 | 88.9% | 57.5% |
| 5a29A01 | 1.50.10.20 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.50 | 42.0 | 2.54e-01 | 98.1% | 26.5% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3579332 | 4156.1.1.2 ↗ | alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › HA2_N,HA2_C | 0.61 | 50.0 | 3.53e-01 | 100.0% | 86.0% |
| 3709753 | 2498.5.1.1 ↗ | mixed a+b and a/b › Zincin-like › GroEL-intermediate domain like › GroEL-intermediate domain like › Cpn60_TCP1 | 0.58 | 43.0 | 3.89e-01 | 83.3% | 57.5% |
| 3773205 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.57 | 37.0 | 3.35e-01 | 83.3% | 50.0% |
| 3478689 | 4232.1.1.0 ↗ | few secondary structure elements › Ribosomal protein bL28-related › Ribosomal protein bL28-related › Ribosomal protein L28 | 0.57 | 43.0 | 3.05e-01 | 87.0% | 88.7% |
| None | — | 0.57 | 41.0 | 2.93e-01 | 90.7% | 22.6% | |
| 4820877 | 101.1.2.86 ↗ | alpha arrays › HTH › HTH › winged helix domain › SMC_Nse1 | 0.54 | 37.0 | 2.84e-01 | 70.4% | 58.9% |
| 4303858 | 212.1.1.0 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like | 0.53 | 44.0 | 3.10e-01 | 92.6% | 62.9% |
| 1685758 | 2003.2.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Formate dehydrogenase/DMSO reductase, domains 2 and 3 › Formate dehydrogenase/DMSO reductase, domains 2 and 3 | 0.52 | 40.0 | 3.41e-01 | 83.3% | 52.2% |
| 3970023 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 35.0 | 3.09e-01 | 81.5% | 46.3% |
| 4015759 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.51 | 43.0 | 3.07e-01 | 96.3% | 37.9% |
| 4020554 | 304.4.1.14 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › Dabb | 0.50 | 39.0 | 3.14e-01 | 90.7% | 60.0% |