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gwa1_scaffold_1_prodigal-single.1__X__X__00225
Bact-Virgwa1_scaffold_1_prodigal-single.1__X__X__00225
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 14-78_97-108_172-186_201-212
Domain cluster:
representative
CATH (51)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ot4A00 | 3.40.50.850 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Isochorismatase-like | 0.78 | 73.0 | 5.78e-01 | 100.0% | 75.8% |
| 3kl2F00 | 3.40.50.850 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Isochorismatase-like | 0.77 | 71.0 | 5.63e-01 | 100.0% | 80.1% |
| 1r6uA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.68 | 62.0 | 4.62e-01 | 100.0% | 70.9% |
| 1zd9A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.63 | 47.0 | 4.05e-01 | 79.8% | 54.8% |
| 2jaxA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.62 | 55.0 | 5.25e-01 | 100.0% | 99.2% |
| 1irxA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.62 | 55.0 | 4.30e-01 | 100.0% | 91.1% |
| 7mi0A01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.61 | 55.0 | 4.54e-01 | 100.0% | 68.3% |
| 2r60A02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.61 | 54.0 | 4.31e-01 | 99.0% | 67.9% |
| 3lm3A01 | 3.20.20.510 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Uncharacterised protein PF12979, DUF3863 | 0.61 | 51.0 | 3.71e-01 | 93.3% | 91.0% |
| 3s55E00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.61 | 55.0 | 4.08e-01 | 100.0% | 94.4% |
| 4jc0A03 | 3.30.750.200 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › | 0.61 | 43.0 | 4.15e-01 | 74.0% | 64.2% |
| 3ab8A00 | 3.40.50.12370 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.61 | 54.0 | 4.07e-01 | 100.0% | 43.3% |
| 2ixdA00 | 3.40.50.10320 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › LmbE-like | 0.61 | 53.0 | 4.19e-01 | 100.0% | 62.5% |
| 2o55A00 | 3.20.20.190 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase | 0.60 | 51.0 | 3.85e-01 | 93.3% | 82.3% |
| 1uanA00 | 3.40.50.10320 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › LmbE-like | 0.60 | 53.0 | 4.21e-01 | 100.0% | 65.9% |
| 1o97C00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.60 | 53.0 | 4.02e-01 | 98.1% | 72.5% |
| 1yh0A02 | 3.40.50.1370 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase | 0.59 | 53.0 | 4.55e-01 | 100.0% | 73.7% |
| 1tg7A01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.59 | 52.0 | 3.65e-01 | 99.0% | 87.6% |
| 7lgnB03 | 3.90.190.20 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Mur ligase, C-terminal domain | 0.59 | 50.0 | 4.55e-01 | 91.3% | 72.5% |
| 1qhwA00 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.59 | 51.0 | 3.79e-01 | 99.0% | 94.7% |
| 7jt8I02 | 3.90.190.20 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Mur ligase, C-terminal domain | 0.59 | 48.0 | 4.34e-01 | 88.5% | 69.4% |
| 3zdbA01 | 3.40.50.1010 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease | 0.59 | 52.0 | 4.59e-01 | 100.0% | 87.9% |
| 5jioA02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.59 | 53.0 | 4.21e-01 | 100.0% | 63.2% |
| 1gzuA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.59 | 52.0 | 4.08e-01 | 100.0% | 76.2% |
| 2bpoA04 | 3.40.50.80 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module | 0.58 | 52.0 | 4.52e-01 | 100.0% | 93.8% |
| 2wq7A01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.58 | 51.0 | 4.72e-01 | 100.0% | 95.6% |
| 2cvbA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.58 | 52.0 | 4.28e-01 | 100.0% | 72.7% |
| 3c5cB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 43.0 | 3.73e-01 | 79.8% | 52.7% |
| 5c3mC01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.58 | 51.0 | 4.41e-01 | 100.0% | 86.8% |
| 3b5iB01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.58 | 51.0 | 3.92e-01 | 100.0% | 66.1% |
| 5hvmA02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.57 | 50.0 | 4.06e-01 | 100.0% | 70.7% |
| 1i60A00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.57 | 47.0 | 3.48e-01 | 90.4% | 70.3% |
| 4dqlA03 | 3.40.50.80 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module | 0.56 | 50.0 | 4.38e-01 | 100.0% | 92.5% |
| 3nv7A00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.56 | 48.0 | 4.27e-01 | 96.2% | 73.5% |
| 2qtlA03 | 3.40.50.80 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module | 0.56 | 50.0 | 4.41e-01 | 100.0% | 98.1% |
| 2f8lA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.56 | 51.0 | 3.86e-01 | 100.0% | 51.5% |
| 3gfzB02 | 3.20.20.450 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain | 0.55 | 48.0 | 3.69e-01 | 98.1% | 80.7% |
| 4kp1A01 | 3.30.499.10 | Alpha Beta › 2-Layer Sandwich › Aconitase; domain 3 › Aconitase, domain 3 | 0.54 | 48.0 | 3.57e-01 | 100.0% | 42.1% |
| 3ik4A02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.54 | 47.0 | 3.57e-01 | 96.2% | 81.3% |
| 1uyvB02 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.54 | 40.0 | 3.00e-01 | 81.7% | 78.7% |
| 2cjwA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 41.0 | 3.45e-01 | 81.7% | 87.6% |
| 7fg9A01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.53 | 48.0 | 4.03e-01 | 100.0% | 86.9% |
| 1m6eX02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.53 | 46.0 | 3.74e-01 | 99.0% | 81.8% |
| 1d1pA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.53 | 47.0 | 4.14e-01 | 100.0% | 78.8% |
| 2v3aA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.52 | 42.0 | 3.87e-01 | 88.5% | 70.4% |
| 4rctA01 | 3.30.870.10 | Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › Endonuclease Chain A | 0.52 | 43.0 | 3.60e-01 | 92.3% | 64.9% |
| 3fg2P02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.51 | 41.0 | 3.91e-01 | 87.5% | 74.6% |
| 1xo1A02 | 3.40.50.1010 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease | 0.51 | 44.0 | 3.94e-01 | 100.0% | 76.7% |
| 5f2hA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 38.0 | 3.24e-01 | 79.8% | 47.8% |
| 4ibnA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.50 | 44.0 | 3.69e-01 | 99.0% | 87.8% |
| 4ap5A01 | 3.40.50.11340 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.50 | 43.0 | 3.60e-01 | 100.0% | 88.5% |
ECOD (63)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4987487 | 7561.1.1.0 ↗ | a/b three-layered sandwiches › Isochorismatase-like hydrolases › Isochorismatase-like hydrolases › Isochorismatase-like hydrolases | 0.74 | 69.0 | 5.77e-01 | 100.0% | 78.2% |
| 4033573 | 2005.2.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › YdcF › YdcF › DUF218 | 0.68 | 61.0 | 4.71e-01 | 100.0% | 56.5% |
| 4442951 | 7512.1.1.9 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › LpxB | 0.65 | 58.0 | 4.65e-01 | 100.0% | 51.0% |
| 4085834 | 2003.1.5.13 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth | 0.65 | 54.0 | 3.88e-01 | 91.3% | 52.8% |
| 3288241 | 2005.1.1.31 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CDPS | 0.64 | 57.0 | 4.42e-01 | 99.0% | 84.6% |
| 4443469 | 7512.1.1.9 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › LpxB | 0.64 | 57.0 | 4.57e-01 | 100.0% | 51.0% |
| 3707620 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.64 | 57.0 | 4.69e-01 | 100.0% | 72.1% |
| 4966392 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.63 | 56.0 | 5.07e-01 | 99.0% | 100.0% |
| 3936158 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.63 | 56.0 | 4.62e-01 | 100.0% | 71.3% |
| 3890206 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.63 | 57.0 | 4.07e-01 | 100.0% | 53.7% |
| 3583171 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.62 | 55.0 | 4.76e-01 | 100.0% | 90.9% |
| 4946736 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.62 | 55.0 | 4.20e-01 | 100.0% | 90.4% |
| 4966264 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.61 | 54.0 | 4.98e-01 | 99.0% | 97.8% |
| 3329750 | 2006.1.1.50 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase_3, PhoLip_ATPase_C | 0.61 | 54.0 | 4.25e-01 | 100.0% | 83.5% |
| 4165848 | 7512.1.1.9 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › LpxB | 0.61 | 53.0 | 4.20e-01 | 100.0% | 45.9% |
| 5031196 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.61 | 54.0 | 4.75e-01 | 99.0% | 92.3% |
| 5058638 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.61 | 54.0 | 4.28e-01 | 100.0% | 64.5% |
| 4967555 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.61 | 52.0 | 4.86e-01 | 97.1% | 99.3% |
| 4311946 | 2003.1.5.80 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_24 | 0.61 | 55.0 | 4.31e-01 | 100.0% | 53.2% |
| 5045191 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.61 | 54.0 | 4.52e-01 | 99.0% | 93.3% |
| 3763738 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.60 | 53.0 | 4.59e-01 | 100.0% | 78.2% |
| 4669990 | 2003.1.5.13 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth | 0.60 | 55.0 | 3.86e-01 | 100.0% | 36.7% |
| 5076437 | 2006.1.4.36 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN_3 | 0.60 | 53.0 | 4.90e-01 | 99.0% | 97.0% |
| 4927003 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.60 | 53.0 | 4.92e-01 | 100.0% | 97.0% |
| 3318810 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.60 | 53.0 | 4.58e-01 | 99.0% | 93.9% |
| 5071713 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.60 | 53.0 | 4.89e-01 | 99.0% | 98.5% |
| 4937176 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.60 | 53.0 | 4.93e-01 | 99.0% | 99.2% |
| 2771289 | 7570.1.1.1 ↗ | a/b three-layered sandwiches › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain › Mur_ligase_C | 0.60 | 49.0 | 4.35e-01 | 90.4% | 73.4% |
| 2842011 | 7570.1.1.1 ↗ | a/b three-layered sandwiches › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain › Mur_ligase_C | 0.59 | 50.0 | 4.40e-01 | 91.3% | 65.8% |
| 3806187 | 246.2.1.3 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos,Metallophos_C | 0.59 | 52.0 | 3.71e-01 | 99.0% | 83.3% |
| 5011726 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.59 | 52.0 | 3.84e-01 | 100.0% | 57.2% |
| 5041441 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.59 | 51.0 | 4.56e-01 | 99.0% | 89.0% |
| 1872921 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.59 | 53.0 | 4.19e-01 | 100.0% | 50.7% |
| 3266052 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.59 | 39.0 | 3.51e-01 | 74.0% | 48.3% |
| 4013604 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.59 | 52.0 | 3.94e-01 | 100.0% | 73.1% |
| 3312101 | 2005.1.1.13 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like | 0.59 | 52.0 | 4.00e-01 | 100.0% | 73.8% |
| 3928483 | 2005.1.1.13 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like | 0.58 | 52.0 | 4.11e-01 | 100.0% | 81.4% |
| 3806709 | 2004.1.1.462 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NBD_SMAX1 | 0.58 | 41.0 | 3.26e-01 | 74.0% | 36.6% |
| 4984271 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.58 | 51.0 | 4.70e-01 | 99.0% | 97.9% |
| 5081987 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.58 | 52.0 | 4.76e-01 | 100.0% | 99.3% |
| 4977829 | 2003.1.1.45 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › UDPG_MGDP_dh_N | 0.57 | 51.0 | 4.03e-01 | 98.1% | 64.7% |
| 3894908 | 2006.1.4.11 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PRORP | 0.57 | 51.0 | 4.28e-01 | 100.0% | 68.6% |
| 5059447 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.57 | 50.0 | 4.57e-01 | 99.0% | 97.9% |
| 5023003 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.57 | 49.0 | 4.67e-01 | 99.0% | 97.7% |
| None | — | 0.57 | 48.0 | 3.39e-01 | 91.3% | 52.8% | |
| 4514314 | 7514.1.1.1 ↗ | a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › NAD_binding_1 | 0.57 | 51.0 | 4.27e-01 | 100.0% | 93.9% |
| 3270829 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.57 | 43.0 | 3.48e-01 | 79.8% | 81.8% |
| 3640749 | 2006.1.4.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like | 0.57 | 49.0 | 4.31e-01 | 99.0% | 98.8% |
| 4943307 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.57 | 43.0 | 3.49e-01 | 79.8% | 45.1% |
| 4021340 | 2007.9.1.9 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain › PF29907 | 0.56 | 40.0 | 3.45e-01 | 76.0% | 48.9% |
| 5049246 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.56 | 49.0 | 4.42e-01 | 100.0% | 92.6% |
| 3495573 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.56 | 42.0 | 4.46e-01 | 79.8% | 94.4% |
| 3911785 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.56 | 41.0 | 3.45e-01 | 78.8% | 46.4% |
| 3893786 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.55 | 42.0 | 3.46e-01 | 81.7% | 83.0% |
| 3410224 | 7516.1.1.37 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › CHGN | 0.55 | 47.0 | 3.46e-01 | 100.0% | 83.4% |
| 3998087 | 2004.1.1.598 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PF29907 | 0.54 | 40.0 | 3.31e-01 | 78.8% | 48.0% |
| 3689548 | 2006.1.4.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like | 0.54 | 47.0 | 4.24e-01 | 100.0% | 95.3% |
| 3057970 | 7590.1.1.0 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs | 0.53 | 38.0 | 3.10e-01 | 76.0% | 64.9% |
| 3667202 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.53 | 39.0 | 4.11e-01 | 78.8% | 90.0% |
| 4821416 | 2002.1.1.45 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_31_2nd | 0.52 | 43.0 | 2.89e-01 | 93.3% | 56.1% |
| 4949008 | 7516.1.1.2 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 | 0.51 | 43.0 | 3.50e-01 | 97.1% | 54.1% |
| 3259156 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.51 | 40.0 | 3.79e-01 | 86.5% | 74.6% |
| 4001466 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.50 | 41.0 | 3.22e-01 | 93.3% | 71.4% |
D2
medium
residues 109-171_187-200
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2khmA01 | 1.10.10.1350 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Spidroin domain, C-terminal domain | 0.63 | 44.0 | 3.99e-01 | 74.0% | 69.4% |
| 3cymA03 | 1.10.150.80 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › HRDC domain | 0.58 | 41.0 | 4.00e-01 | 75.3% | 77.3% |
| 2xhsA00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.58 | 43.0 | 3.10e-01 | 81.8% | 35.0% |
| 1ti2A03 | 3.40.228.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dimethylsulfoxide Reductase; domain 2 › Dimethylsulfoxide Reductase, domain 2 | 0.54 | 46.0 | 3.22e-01 | 100.0% | 77.7% |
| 5zm4B00 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.54 | 42.0 | 2.95e-01 | 87.0% | 67.3% |
| 1fnnB03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 44.0 | 4.09e-01 | 97.4% | 95.1% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3297516 | 4953.1.1.4 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › ASL_C2 | 0.65 | 51.0 | 4.95e-01 | 83.1% | 82.4% |
| 4646581 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.60 | 45.0 | 2.94e-01 | 84.4% | 54.9% |
| 3916954 | 621.1.1.0 ↗ | alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | 0.58 | 48.0 | 3.99e-01 | 93.5% | 84.8% |
| 3841412 | 101.1.2.154 ↗ | alpha arrays › HTH › HTH › winged helix domain › CDT1_C | 0.58 | 44.0 | 3.97e-01 | 85.7% | 75.7% |
| 4597969 | 4953.1.1.0 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like | 0.57 | 45.0 | 4.58e-01 | 85.7% | 92.0% |
| 3467284 | 101.1.2.154 ↗ | alpha arrays › HTH › HTH › winged helix domain › CDT1_C | 0.57 | 44.0 | 4.02e-01 | 87.0% | 83.3% |
| 4330255 | 4953.1.1.4 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › ASL_C2 | 0.55 | 43.0 | 4.21e-01 | 85.7% | 82.4% |
| 4635416 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.55 | 44.0 | 2.86e-01 | 90.9% | 43.7% |
| 5079588 | 310.2.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF | 0.53 | 36.0 | 3.48e-01 | 70.1% | 90.0% |
| 3888953 | 4953.1.1.4 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › ASL_C2 | 0.53 | 41.0 | 4.02e-01 | 85.7% | 82.4% |
| 3478660 | 110.1.1.0 ↗ | alpha arrays › DEATH domain › DEATH domain › DEATH domain | 0.50 | 40.0 | 3.70e-01 | 84.4% | 69.5% |
| 3552400 | 101.1.2.566 ↗ | alpha arrays › HTH › HTH › winged helix domain › CDT1, CDT1_C | 0.50 | 41.0 | 2.86e-01 | 94.8% | 29.0% |