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gwa1_scaffold_1_prodigal-single.1__X__X__00344
Bact-Virgwa1_scaffold_1_prodigal-single.1__X__X__00344
Identity
- Kingdom:
- phage
Quality
88.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-50
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1zhcA00 | 6.10.280.50 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.72 | 59.0 | 5.21e-01 | 97.9% | 97.4% |
| 3vfzB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 51.0 | 4.77e-01 | 91.7% | 100.0% |
| 1qr0A01 | 3.90.470.20 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain | 0.61 | 49.0 | 3.75e-01 | 95.8% | 36.8% |
| 3d5lA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 43.0 | 4.24e-01 | 87.5% | 76.9% |
| 2dpmA02 | 1.10.1020.10 | Mainly Alpha › Orthogonal Bundle › Adenine-specific Methyltransferase; domain 2 › Adenine-specific Methyltransferase, Domain 2 | 0.57 | 43.0 | 3.34e-01 | 81.2% | 50.5% |
| 1a04A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 39.0 | 3.28e-01 | 85.4% | 46.3% |
| 1wj7A01 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.54 | 36.0 | 3.47e-01 | 72.9% | 71.7% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3314000 | 606.1.1.10 ↗ | alpha complex topology › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain › DOG1 | 0.73 | 55.0 | 3.61e-01 | 91.7% | 20.0% |
| 1487333 | 3323.1.1.2 ↗ | alpha bundles › Inserted helical domain in fatty acid synthase subunit beta › Inserted helical domain in fatty acid synthase subunit beta › Inserted helical domain in fatty acid synthase subunit beta › FabD_helical_ins | 0.73 | 64.0 | 5.07e-01 | 100.0% | 53.6% |
| 3681442 | 3711.1.1.4 ↗ | alpha bundles › LTXXQ motif family protein › LTXXQ motif family protein › LTXXQ motif family protein › DOG1 | 0.67 | 57.0 | 3.76e-01 | 93.8% | 65.6% |
| 3593048 | 564.1.1.0 ↗ | alpha arrays › N-terminal, cytoplasmic domain of anti-sigma factors › N-terminal, cytoplasmic domain of anti-sigma factors › N-terminal, cytoplasmic domain of anti-sigma factors | 0.65 | 49.0 | 4.73e-01 | 83.3% | 74.5% |
| 3603167 | 101.1.1.17 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 | 0.62 | 49.0 | 4.37e-01 | 83.3% | 70.8% |
| 4010691 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.61 | 41.0 | 3.96e-01 | 70.8% | 81.8% |
| 3943462 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.61 | 47.0 | 4.52e-01 | 91.7% | 72.7% |