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gwa1_scaffold_31_prodigal-single.1__X__X__00034
Bact-Virgwa1_scaffold_31_prodigal-single.1__X__X__00034
Identity
- Kingdom:
- phage
Quality
84.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-87
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ln0A00 | 3.40.1440.10 | Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.79 | 73.0 | 6.96e-01 | 100.0% | 92.4% |
| 5j3uA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.62 | 37.0 | 3.22e-01 | 71.6% | 38.7% |
| 4u7cB04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.57 | 39.0 | 3.57e-01 | 71.6% | 59.6% |
| 4d7pA00 | 2.60.40.730 | Mainly Beta › Sandwich › Immunoglobulin-like › SOR catalytic domain | 0.56 | 37.0 | 3.53e-01 | 71.6% | 57.3% |
| 6fzvD01 | 2.60.120.290 | Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain | 0.54 | 36.0 | 3.20e-01 | 77.8% | 46.6% |
| 5nckA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.53 | 35.0 | 3.30e-01 | 81.5% | 53.3% |
| 3kq4B02 | 2.60.120.290 | Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain | 0.52 | 35.0 | 3.14e-01 | 77.8% | 47.5% |
| 3g7dA03 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.52 | 33.0 | 2.88e-01 | 71.6% | 41.9% |
| 2qqkA01 | 2.60.120.290 | Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain | 0.51 | 34.0 | 3.03e-01 | 81.5% | 47.0% |
| 2jkdB00 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.51 | 39.0 | 3.28e-01 | 85.2% | 93.2% |
| 1e3hA03 | 3.30.230.70 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › GHMP Kinase, N-terminal domain | 0.50 | 42.0 | 3.18e-01 | 95.1% | 93.4% |
| 1vq8B03 | 3.30.1430.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein L3; Chain: B; domain 2, › | 0.50 | 38.0 | 3.44e-01 | 80.2% | 71.2% |
| 6s2wA01 | 3.30.2260.10 | Alpha Beta › 2-Layer Sandwich › ERH-like fold › Enhancer of rudimentary | 0.50 | 37.0 | 3.71e-01 | 80.2% | 78.0% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3283006 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.68 | 41.0 | 3.82e-01 | 72.8% | 48.0% |
| 4033923 | 821.1.1.0 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.68 | 61.0 | 5.55e-01 | 100.0% | 75.2% |
| 1867336 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.58 | 40.0 | 4.40e-01 | 80.2% | 93.7% |
| 3899253 | 3957.1.1.0 ↗ | a+b two layers › EKC/KEOPS complex subunit GON7 › EKC/KEOPS complex subunit GON7 › EKC/KEOPS complex subunit GON7 | 0.57 | 33.0 | 4.08e-01 | 98.8% | 97.8% |
| 5053721 | 2492.1.1.5 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › AICARFT_IMPCHas | 0.57 | 42.0 | 3.57e-01 | 80.2% | 74.8% |
| 4943401 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.56 | 43.0 | 4.27e-01 | 92.6% | 80.0% |
| 3228546 | 10.4.1.1 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB | 0.56 | 36.0 | 3.27e-01 | 77.8% | 47.0% |
| 5022263 | 322.1.1.2 ↗ | a+b two layers › HPr-like › HPr-like › HPr-like › 3H | 0.55 | 38.0 | 3.50e-01 | 72.8% | 54.5% |
| 4648475 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.55 | 39.0 | 4.32e-01 | 74.1% | 100.0% |
| 3912175 | 10.1.1.10 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM | 0.53 | 36.0 | 2.83e-01 | 76.5% | 33.1% |
| 4392353 | 245.1.1.1 ↗ | a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 › RNase_PH_C | 0.52 | 37.0 | 3.58e-01 | 76.5% | 86.3% |
| 3913380 | 10.4.1.1 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB | 0.52 | 34.0 | 3.12e-01 | 77.8% | 49.1% |
| 3748555 | 10.32.1.216 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › MAM | 0.51 | 37.0 | 3.30e-01 | 76.5% | 55.7% |
| 3923413 | 10.4.1.1 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB | 0.51 | 34.0 | 2.98e-01 | 77.8% | 44.2% |
| 3874464 | 304.48.1.1 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 | 0.50 | 42.0 | 2.74e-01 | 92.6% | 27.9% |
D2
high
residues 174-226
Domain cluster:
rep: gwa1_scaffold_31_prodigal-single.1__X__X__00288__D96-151
CATH (68)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2w7nA00 | 1.10.10.2690 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.89 | 61.0 | 4.93e-01 | 71.7% | 40.4% |
| 2x48A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.86 | 59.0 | 5.91e-01 | 73.6% | 70.4% |
| 1gdtB03 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.84 | 62.0 | 6.67e-01 | 100.0% | 93.3% |
| 3vfzB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.84 | 57.0 | 5.41e-01 | 71.7% | 60.3% |
| 2lvsA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.84 | 58.0 | 5.77e-01 | 86.8% | 69.6% |
| 4go1A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.83 | 59.0 | 5.95e-01 | 75.5% | 79.6% |
| 1k78A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.83 | 63.0 | 5.86e-01 | 81.1% | 66.7% |
| 1l3lA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.82 | 54.0 | 5.08e-01 | 71.7% | 57.1% |
| 3t0yA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.82 | 54.0 | 5.17e-01 | 71.7% | 60.0% |
| 1tc3C00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.82 | 60.0 | 6.09e-01 | 79.2% | 80.4% |
| 2jn6A01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.81 | 55.0 | 4.72e-01 | 71.7% | 45.9% |
| 2w48B01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.81 | 58.0 | 5.89e-01 | 88.7% | 76.9% |
| 2cobA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.81 | 56.0 | 6.02e-01 | 73.6% | 88.6% |
| 2llkA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.81 | 55.0 | 6.09e-01 | 71.7% | 92.7% |
| 1r71A01 | 1.10.10.730 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › KorB DNA-binding domain | 0.78 | 57.0 | 5.59e-01 | 77.4% | 75.0% |
| 4a0zA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 57.0 | 5.56e-01 | 88.7% | 71.2% |
| 2jrtA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 54.0 | 4.68e-01 | 77.4% | 47.7% |
| 5xsoA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 50.0 | 4.46e-01 | 71.7% | 48.7% |
| 3onqA03 | 1.10.10.2840 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PucR C-terminal helix-turn-helix domain | 0.75 | 50.0 | 3.74e-01 | 71.7% | 28.2% |
| 4u7bA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 49.0 | 5.56e-01 | 71.7% | 92.3% |
| 4pcqA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 49.0 | 5.05e-01 | 73.6% | 72.0% |
| 2e7xA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 52.0 | 5.31e-01 | 88.7% | 75.0% |
| 3tgnB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 51.0 | 4.83e-01 | 71.7% | 60.3% |
| 2dbbB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 51.0 | 5.06e-01 | 71.7% | 70.9% |
| 2ia0A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 51.0 | 5.06e-01 | 71.7% | 72.2% |
| 2r0qC02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.73 | 65.0 | 6.49e-01 | 100.0% | 94.5% |
| 6sdkA01 | 1.10.10.2830 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.73 | 50.0 | 4.08e-01 | 88.7% | 39.2% |
| 5z4zC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 49.0 | 4.12e-01 | 88.7% | 42.0% |
| 4ijaA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 52.0 | 4.90e-01 | 90.6% | 63.5% |
| 4izzB02 | 1.10.10.1680 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › HetR, N-terminal DNA-binding domain | 0.72 | 56.0 | 5.17e-01 | 94.3% | 66.2% |
| 3gw2A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 48.0 | 3.95e-01 | 71.7% | 39.8% |
| 2ethA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 49.0 | 3.54e-01 | 71.7% | 27.0% |
| 3zh9B03 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.71 | 59.0 | 4.51e-01 | 100.0% | 38.9% |
| 2mqkA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.71 | 50.0 | 4.68e-01 | 84.9% | 60.0% |
| 2cfxA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 51.0 | 5.22e-01 | 90.6% | 80.0% |
| 5dukB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 54.0 | 5.01e-01 | 96.2% | 65.7% |
| 2nyxB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 49.0 | 3.53e-01 | 88.7% | 27.5% |
| 2e18A00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.70 | 56.0 | 3.60e-01 | 100.0% | 18.8% |
| 1k6yA01 | 1.10.10.200 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain | 0.68 | 47.0 | 4.98e-01 | 73.6% | 84.8% |
| 1aisB02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.67 | 53.0 | 4.47e-01 | 90.6% | 50.0% |
| 1jhgA00 | 1.10.1270.10 | Mainly Alpha › Orthogonal Bundle › Trp Operon Repressor; Chain A › TrpR-like | 0.67 | 58.0 | 4.68e-01 | 96.2% | 68.3% |
| 5cz2G00 | 1.10.10.200 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain | 0.67 | 44.0 | 4.77e-01 | 75.5% | 87.8% |
| 4rocA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.66 | 52.0 | 4.25e-01 | 92.5% | 45.6% |
| 1sfxB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 50.0 | 3.96e-01 | 96.2% | 41.3% |
| 2j5oA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 46.0 | 4.29e-01 | 90.6% | 60.0% |
| 3cuqB03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 48.0 | 4.39e-01 | 92.5% | 60.9% |
| 2fxaA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 49.0 | 3.47e-01 | 81.1% | 34.6% |
| 2m8gX00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.65 | 48.0 | 4.36e-01 | 90.6% | 60.0% |
| 1ojlA03 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.65 | 46.0 | 4.81e-01 | 88.7% | 85.1% |
| 3anpB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.65 | 45.0 | 3.06e-01 | 73.6% | 21.6% |
| 5zyrA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 44.0 | 3.28e-01 | 90.6% | 26.5% |
| 5eriA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 51.0 | 3.63e-01 | 86.8% | 33.3% |
| 7vjmB01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.63 | 46.0 | 4.36e-01 | 86.8% | 64.1% |
| 2a6cA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.63 | 51.0 | 4.50e-01 | 100.0% | 60.5% |
| 2o38A01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.63 | 49.0 | 4.60e-01 | 96.2% | 69.2% |
| 1umqA00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.63 | 51.0 | 4.95e-01 | 94.3% | 80.0% |
| 1lj9B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 49.0 | 3.60e-01 | 86.8% | 35.9% |
| 3bj6B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 49.0 | 3.50e-01 | 86.8% | 33.8% |
| 4em2A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 53.0 | 3.81e-01 | 96.2% | 50.0% |
| 1lnwF01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 49.0 | 3.68e-01 | 86.8% | 42.7% |
| 2qwwC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 48.0 | 3.54e-01 | 86.8% | 34.1% |
| 2hyjA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.61 | 48.0 | 5.10e-01 | 88.7% | 100.0% |
| 3mvpA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.60 | 46.0 | 4.83e-01 | 84.9% | 100.0% |
| 4jykA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.60 | 48.0 | 4.71e-01 | 94.3% | 84.5% |
| 2id3A01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.60 | 46.0 | 4.76e-01 | 84.9% | 98.0% |
| 3bddD00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 50.0 | 3.71e-01 | 92.5% | 38.6% |
| 3vuqB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.59 | 47.0 | 3.33e-01 | 92.5% | 26.7% |
| 2cmpA00 | 1.10.10.1400 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Terminase, small subunit, N-terminal DNA-binding domain, HTH motif | 0.56 | 44.0 | 4.38e-01 | 88.7% | 85.7% |
ECOD (93)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5070906 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.99 | 74.0 | 7.01e-01 | 77.4% | 68.3% |
| 5024511 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.93 | 69.0 | 7.14e-01 | 79.2% | 82.0% |
| 3916395 | 101.1.1.129 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_4 | 0.92 | 68.0 | 5.25e-01 | 86.8% | 39.0% |
| 4198219 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.92 | 64.0 | 6.93e-01 | 77.4% | 86.7% |
| 3586837 | 101.1.1.17 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 | 0.92 | 69.0 | 7.09e-01 | 81.1% | 84.0% |
| 4293871 | 101.1.1.62 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_24 | 0.92 | 66.0 | 6.53e-01 | 77.4% | 72.7% |
| 3589359 | 101.1.1.68 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_38 | 0.90 | 63.0 | 7.08e-01 | 77.4% | 97.5% |
| 3883738 | 101.1.3.20 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_Tnp_4 | 0.89 | 69.0 | 5.60e-01 | 90.6% | 47.8% |
| 3398365 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.89 | 61.0 | 3.84e-01 | 71.7% | 16.2% |
| 4201722 | 101.1.1.13 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 | 0.89 | 64.0 | 7.16e-01 | 77.4% | 100.0% |
| 3204111 | 101.1.1.201 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Bot1p | 0.88 | 68.0 | 5.67e-01 | 81.1% | 50.6% |
| 3984815 | 101.1.1.13 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 | 0.88 | 64.0 | 6.40e-01 | 79.2% | 74.5% |
| 3272419 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.88 | 62.0 | 6.40e-01 | 73.6% | 78.0% |
| 3882839 | 101.1.1.129 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_4 | 0.88 | 71.0 | 5.25e-01 | 90.6% | 37.5% |
| 3873677 | 101.1.1.24 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N | 0.88 | 66.0 | 5.95e-01 | 79.2% | 60.0% |
| 3401087 | 101.1.1.24 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N | 0.88 | 64.0 | 6.65e-01 | 77.4% | 82.0% |
| 3887530 | 101.1.10.41 ↗ | alpha arrays › HTH › HTH › Cyclin-like › HTH_Tnp_4 | 0.87 | 68.0 | 5.59e-01 | 90.6% | 48.9% |
| 4060647 | 101.1.6.0 ↗ | alpha arrays › HTH › HTH › TrpR | 0.87 | 61.0 | 5.65e-01 | 73.6% | 60.0% |
| 3973615 | 101.1.6.0 ↗ | alpha arrays › HTH › HTH › TrpR | 0.87 | 62.0 | 5.77e-01 | 86.8% | 61.5% |
| 3877765 | 101.1.1.35 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_psq | 0.86 | 62.0 | 6.86e-01 | 77.4% | 100.0% |
| 3953011 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.86 | 62.0 | 6.15e-01 | 77.4% | 72.7% |
| 3301179 | 101.1.1.267 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › PF26138 | 0.86 | 66.0 | 5.81e-01 | 90.6% | 57.3% |
| 3834548 | 101.1.3.12 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › PF26138 | 0.86 | 67.0 | 6.24e-01 | 90.6% | 67.7% |
| 4009872 | 101.1.1.63 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 | 0.86 | 60.0 | 5.79e-01 | 73.6% | 65.0% |
| 3879118 | 101.1.1.60 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 | 0.86 | 60.0 | 5.99e-01 | 88.7% | 70.9% |
| 3741366 | 101.1.1.96 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Neugrin | 0.86 | 67.0 | 6.20e-01 | 83.0% | 69.2% |
| 3590753 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.86 | 64.0 | 6.59e-01 | 92.5% | 84.0% |
| 4372277 | 101.1.1.96 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Neugrin | 0.85 | 67.0 | 5.20e-01 | 83.0% | 42.9% |
| 3448782 | 101.1.1.267 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › PF26138 | 0.85 | 66.0 | 5.25e-01 | 88.7% | 44.0% |
| 4637005 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.85 | 65.0 | 4.75e-01 | 81.1% | 34.6% |
| 3968008 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.85 | 59.0 | 6.04e-01 | 71.7% | 76.0% |
| 3967091 | 101.1.1.13 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 | 0.85 | 70.0 | 6.69e-01 | 100.0% | 78.3% |
| 3973360 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.84 | 58.0 | 5.21e-01 | 71.7% | 54.3% |
| 3567273 | 101.1.1.35 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_psq | 0.83 | 61.0 | 6.51e-01 | 77.4% | 91.1% |
| 3232498 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.83 | 56.0 | 5.07e-01 | 71.7% | 52.9% |
| 4280807 | 101.1.1.13 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 | 0.83 | 60.0 | 5.98e-01 | 79.2% | 74.5% |
| 3404418 | 101.1.1.24 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N | 0.83 | 62.0 | 5.61e-01 | 79.2% | 60.0% |
| 4533441 | 101.1.6.4 ↗ | alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C | 0.83 | 63.0 | 5.12e-01 | 81.1% | 47.4% |
| 4059731 | 101.1.1.64 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › tRNA_bind_2 | 0.82 | 56.0 | 4.45e-01 | 71.7% | 36.2% |
| 4945289 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.82 | 62.0 | 5.97e-01 | 96.2% | 71.7% |
| 3180778 | 101.1.1.24 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N | 0.82 | 62.0 | 5.82e-01 | 81.1% | 67.7% |
| 3926525 | 101.1.6.0 ↗ | alpha arrays › HTH › HTH › TrpR | 0.82 | 57.0 | 6.35e-01 | 73.6% | 97.5% |
| 4989022 | 101.1.2.881 ↗ | alpha arrays › HTH › HTH › winged helix domain › UPF0175 | 0.82 | 55.0 | 5.87e-01 | 71.7% | 82.2% |
| 3239905 | 101.1.1.35 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_psq | 0.81 | 59.0 | 5.03e-01 | 77.4% | 48.2% |
| 3452698 | 101.1.10.37 ↗ | alpha arrays › HTH › HTH › Cyclin-like › PF26138 | 0.81 | 62.0 | 5.09e-01 | 90.6% | 46.3% |
| 1159960 | 101.1.1.95 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › PhyR_sigma-like | 0.81 | 55.0 | 5.05e-01 | 71.7% | 58.0% |
| 4106860 | 101.1.6.4 ↗ | alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C | 0.81 | 63.0 | 5.08e-01 | 88.7% | 46.3% |
| 4197050 | 101.1.6.4 ↗ | alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C | 0.81 | 61.0 | 4.82e-01 | 81.1% | 42.9% |
| 3998880 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.81 | 62.0 | 5.06e-01 | 92.5% | 46.3% |
| 3793383 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.80 | 61.0 | 5.76e-01 | 92.5% | 67.7% |
| 3913655 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.80 | 66.0 | 5.72e-01 | 90.6% | 60.0% |
| 3800176 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.79 | 61.0 | 5.18e-01 | 92.5% | 51.8% |
| 4994233 | 101.1.11.203 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › UPF0175 | 0.79 | 60.0 | 5.20e-01 | 81.1% | 56.2% |
| 3503708 | 101.1.1.35 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_psq | 0.79 | 57.0 | 5.35e-01 | 77.4% | 64.6% |
| 5051680 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.79 | 63.0 | 5.38e-01 | 84.9% | 56.2% |
| 2792505 | 101.1.2.139 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_23 | 0.79 | 61.0 | 5.98e-01 | 94.3% | 77.2% |
| 3983783 | 101.1.1.13 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 | 0.78 | 56.0 | 4.66e-01 | 79.2% | 43.2% |
| 3786618 | 101.1.1.201 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Bot1p | 0.78 | 69.0 | 5.09e-01 | 94.3% | 50.8% |
| 4383273 | 101.1.1.201 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Bot1p | 0.78 | 69.0 | 4.93e-01 | 94.3% | 40.9% |
| 4626289 | 101.1.1.60 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 | 0.78 | 57.0 | 5.38e-01 | 79.2% | 66.2% |
| 4944661 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.77 | 61.0 | 6.10e-01 | 96.2% | 83.6% |
| 4014100 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.77 | 56.0 | 5.47e-01 | 79.2% | 71.7% |
| 3759371 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.77 | 61.0 | 5.20e-01 | 96.2% | 52.8% |
| 4174590 | 101.1.2.61 ↗ | alpha arrays › HTH › HTH › winged helix domain › Sigma70_r4 | 0.77 | 67.0 | 6.28e-01 | 100.0% | 78.5% |
| 3620215 | 101.1.1.35 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_psq | 0.77 | 58.0 | 3.97e-01 | 90.6% | 23.2% |
| 3376425 | 101.1.1.267 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › PF26138 | 0.77 | 59.0 | 5.00e-01 | 90.6% | 51.8% |
| 4992527 | 101.1.11.203 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › UPF0175 | 0.77 | 55.0 | 4.82e-01 | 77.4% | 51.2% |
| 3469752 | 101.1.1.35 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_psq | 0.77 | 53.0 | 5.62e-01 | 86.8% | 86.7% |
| 3905704 | 101.1.10.41 ↗ | alpha arrays › HTH › HTH › Cyclin-like › HTH_Tnp_4 | 0.76 | 69.0 | 5.52e-01 | 96.2% | 53.7% |
| 4994133 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.76 | 58.0 | 4.88e-01 | 81.1% | 52.9% |
| 4626741 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.76 | 52.0 | 4.26e-01 | 71.7% | 40.0% |
| 3908686 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.76 | 65.0 | 5.12e-01 | 96.2% | 47.6% |
| 3985633 | 101.1.1.13 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 | 0.75 | 54.0 | 5.40e-01 | 79.2% | 74.5% |
| 3919175 | 101.1.1.129 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_4 | 0.75 | 67.0 | 5.16e-01 | 96.2% | 58.2% |
| 3987778 | 101.1.1.118 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_IS630 | 0.75 | 55.0 | 5.51e-01 | 81.1% | 76.4% |
| 5045749 | 101.1.11.203 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › UPF0175 | 0.75 | 57.0 | 5.33e-01 | 84.9% | 67.7% |
| 5021422 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.74 | 50.0 | 4.72e-01 | 71.7% | 58.5% |
| 5038325 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.74 | 52.0 | 5.40e-01 | 88.7% | 79.6% |
| 3953807 | 101.1.6.0 ↗ | alpha arrays › HTH › HTH › TrpR | 0.73 | 62.0 | 4.33e-01 | 94.3% | 47.9% |
| 3620216 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.73 | 56.0 | 4.84e-01 | 96.2% | 52.9% |
| 5013438 | 101.1.2.881 ↗ | alpha arrays › HTH › HTH › winged helix domain › UPF0175 | 0.73 | 57.0 | 5.48e-01 | 86.8% | 75.0% |
| 5060354 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 52.0 | 4.85e-01 | 96.2% | 61.5% |
| 5065596 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.72 | 55.0 | 4.84e-01 | 84.9% | 55.0% |
| 5074942 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.72 | 54.0 | 4.81e-01 | 81.1% | 60.0% |
| 3477654 | 101.1.1.35 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_psq | 0.72 | 55.0 | 5.47e-01 | 83.0% | 81.8% |
| 3389609 | 101.1.1.35 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_psq | 0.72 | 54.0 | 4.99e-01 | 83.0% | 62.9% |
| 4938759 | 101.1.8.14 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › UPF0175 | 0.70 | 54.0 | 5.43e-01 | 86.8% | 81.8% |
| 5002651 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.70 | 54.0 | 4.49e-01 | 94.3% | 47.4% |
| 5060990 | 2005.1.1.18 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase | 0.68 | 55.0 | 3.51e-01 | 98.1% | 17.6% |
| 3410592 | 101.1.8.25 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › HTH_psq | 0.68 | 54.0 | 5.43e-01 | 94.3% | 87.3% |
| 3588243 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.67 | 49.0 | 4.77e-01 | 92.5% | 70.0% |
| 5072014 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.67 | 56.0 | 5.04e-01 | 94.3% | 68.0% |
| 3958096 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 47.0 | 3.97e-01 | 90.6% | 45.6% |