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gwa1_scaffold_31_prodigal-single.1__X__X__00051
Bact-Virgwa1_scaffold_31_prodigal-single.1__X__X__00051
Identity
- Kingdom:
- phage
Quality
58.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 393-544
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6e55A01 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.61 | 29.0 | 3.88e-01 | 81.6% | 87.8% |
| 8ainB01 | 3.10.450.250 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › S. aureus uracil DNA glycosylase inhibitor | 0.59 | 27.0 | 3.16e-01 | 72.4% | 58.1% |
| 1fu1A01 | 2.170.210.10 | Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › DNA double-strand break repair and VJ recombination XRCC4, N-terminal | 0.58 | 31.0 | 3.52e-01 | 82.9% | 66.9% |
| 8aimG01 | 3.10.450.20 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Bacteriophage PBS2, uracil-glycosylase inhibitor | 0.57 | 26.0 | 3.35e-01 | 73.0% | 74.1% |
| 7dpyB01 | 2.40.128.200 | Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor | 0.57 | 25.0 | 3.35e-01 | 75.0% | 75.9% |
| 3lmfA00 | 1.20.1270.360 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.57 | 36.0 | 4.21e-01 | 93.4% | 89.0% |
| 2rldA00 | 1.20.1440.60 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence | 0.57 | 37.0 | 4.24e-01 | 94.1% | 87.7% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3384661 | 601.1.2.90 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › Not3 | 0.58 | 37.0 | 3.93e-01 | 94.7% | 73.1% |
| 3319168 | 3922.1.1.163 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Not3 | 0.58 | 36.0 | 3.92e-01 | 94.1% | 73.1% |
| 3172661 | 5069.1.3.108 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits › PF30349 | 0.57 | 33.0 | 4.13e-01 | 96.1% | 95.6% |
| 4965906 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.56 | 29.0 | 3.36e-01 | 96.7% | 68.2% |
| 4947372 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.55 | 31.0 | 3.55e-01 | 96.7% | 73.6% |
| 3665583 | 3636.1.1.3 ↗ | a+b two layers › XPD arch domain › XPD arch domain › XPD arch domain › ARCH_RTEL1 | 0.52 | 41.0 | 3.96e-01 | 96.1% | 71.1% |
| 3205757 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.51 | 38.0 | 3.86e-01 | 96.7% | 78.1% |
| 3939799 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.50 | 38.0 | 4.01e-01 | 94.1% | 87.1% |
D2
medium
residues 147-239
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6bioA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.89 | 52.0 | 6.60e-01 | 96.8% | 96.5% |
| 8b2gA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.79 | 49.0 | 6.06e-01 | 95.7% | 100.0% |
| 6ghmC02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.77 | 45.0 | 5.40e-01 | 100.0% | 85.9% |
| 2vgeA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.74 | 44.0 | 3.34e-01 | 100.0% | 26.6% |
| 2eczA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.73 | 43.0 | 4.93e-01 | 100.0% | 78.6% |
| 1i1jB00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.73 | 49.0 | 4.69e-01 | 100.0% | 60.6% |
| 1mv3A01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.66 | 46.0 | 5.08e-01 | 100.0% | 90.5% |
| 4kg0A01 | 2.60.120.920 | Mainly Beta › Sandwich › Jelly Rolls › SPRY domain | 0.50 | 44.0 | 3.80e-01 | 100.0% | 68.6% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4291404 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.84 | 56.0 | 6.22e-01 | 100.0% | 84.0% |
| 4207556 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.82 | 56.0 | 6.39e-01 | 100.0% | 92.9% |
| 4105348 | 4.1.1.394 ↗ | beta barrels › SH3 › SH3 › SH3 › SlpA | 0.78 | 50.0 | 5.93e-01 | 98.9% | 95.3% |
| 3389584 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.78 | 46.0 | 4.83e-01 | 100.0% | 64.7% |
| 3787905 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.77 | 47.0 | 5.37e-01 | 100.0% | 81.4% |
| 3881763 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.77 | 45.0 | 5.54e-01 | 100.0% | 91.7% |
| 3888226 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.76 | 45.0 | 4.98e-01 | 100.0% | 73.3% |
| 3588727 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.75 | 45.0 | 5.02e-01 | 100.0% | 78.6% |
| 3588736 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.75 | 44.0 | 5.08e-01 | 98.9% | 83.1% |
| 3868602 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.74 | 49.0 | 4.80e-01 | 100.0% | 63.0% |
| 3928985 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.74 | 45.0 | 4.60e-01 | 100.0% | 63.3% |
| 3587030 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 44.0 | 4.93e-01 | 100.0% | 80.0% |
| 3929341 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.72 | 49.0 | 5.22e-01 | 97.8% | 81.2% |
| 3392590 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 45.0 | 5.47e-01 | 96.8% | 100.0% |
| 3500406 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.67 | 47.0 | 3.08e-01 | 100.0% | 18.6% |
| 3623837 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 48.0 | 5.12e-01 | 97.8% | 86.3% |
| 3475807 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.67 | 47.0 | 5.00e-01 | 100.0% | 83.7% |
| 3184612 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 45.0 | 4.82e-01 | 100.0% | 85.0% |
| 4953853 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.54 | 33.0 | 3.62e-01 | 96.8% | 76.0% |
D3
medium
residues 271-369
Domain cluster:
representative
CATH (40)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3onrJ00 | 3.30.1660.10 | Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin | 0.72 | 44.0 | 5.15e-01 | 84.8% | 88.2% |
| 2v94B00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.71 | 50.0 | 5.13e-01 | 93.9% | 77.4% |
| 5optY00 | 3.30.70.3370 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.68 | 50.0 | 4.63e-01 | 94.9% | 61.8% |
| 2gysA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.66 | 46.0 | 4.85e-01 | 96.0% | 82.6% |
| 4q9cA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.65 | 46.0 | 4.55e-01 | 96.0% | 69.5% |
| 4lfhD02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.65 | 39.0 | 4.17e-01 | 96.0% | 69.4% |
| 2xzmP00 | 3.30.70.3370 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 45.0 | 3.97e-01 | 93.9% | 48.6% |
| 1vq8S00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.64 | 42.0 | 4.57e-01 | 97.0% | 81.5% |
| 1zpvA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.64 | 37.0 | 3.98e-01 | 84.8% | 65.9% |
| 4pg4B03 | 3.30.70.3100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 34.0 | 3.84e-01 | 83.8% | 68.0% |
| 5xyiY00 | 3.30.70.3370 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 43.0 | 4.28e-01 | 94.9% | 66.7% |
| 1u8sA02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.63 | 36.0 | 3.92e-01 | 84.8% | 66.7% |
| 3ibwA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.62 | 35.0 | 3.84e-01 | 84.8% | 67.1% |
| 6ue9L02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 46.0 | 4.29e-01 | 96.0% | 63.1% |
| 1bwvA01 | 3.30.70.150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RuBisCO large subunit, N-terminal domain | 0.62 | 46.0 | 4.26e-01 | 88.9% | 60.9% |
| 4q97A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 43.0 | 4.21e-01 | 96.0% | 66.7% |
| 3p96A02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.61 | 35.0 | 3.74e-01 | 82.8% | 64.3% |
| 3f62A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 45.0 | 4.40e-01 | 97.0% | 72.2% |
| 3tupA02 | 3.30.70.380 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ferrodoxin-fold anticodon-binding domain | 0.60 | 39.0 | 3.97e-01 | 85.9% | 66.7% |
| 2nyiA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.60 | 35.0 | 3.79e-01 | 84.8% | 67.9% |
| 4o5lL02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 42.0 | 4.14e-01 | 96.0% | 69.2% |
| 3o4oC03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 44.0 | 4.32e-01 | 97.0% | 71.8% |
| 2go8A01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 34.0 | 3.79e-01 | 86.9% | 73.0% |
| 5mmiU01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.59 | 40.0 | 4.26e-01 | 97.0% | 84.1% |
| 1lq9A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 39.0 | 3.80e-01 | 88.9% | 60.7% |
| 1u8sA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.57 | 34.0 | 3.63e-01 | 83.8% | 66.3% |
| 5is2A01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.57 | 34.0 | 3.58e-01 | 84.8% | 63.7% |
| 1o0vA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 40.0 | 3.88e-01 | 96.0% | 65.5% |
| 3fncB00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.57 | 39.0 | 3.36e-01 | 71.7% | 90.7% |
| 1u7lA03 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 38.0 | 3.97e-01 | 100.0% | 75.6% |
| 1uv7A00 | 3.30.1360.100 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › General secretion pathway protein M, EpsM | 0.56 | 34.0 | 3.79e-01 | 92.9% | 78.9% |
| 3bm7A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 37.0 | 3.63e-01 | 89.9% | 62.3% |
| 7dl8C01 | 3.30.110.20 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain | 0.55 | 36.0 | 3.83e-01 | 94.9% | 74.2% |
| 1jj2L00 | 3.40.1120.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal protein L15e › Ribosomal protein L15 | 0.55 | 50.0 | 4.01e-01 | 100.0% | 57.7% |
| 2ldkA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.55 | 47.0 | 3.98e-01 | 96.0% | 80.8% |
| 3kxyJ00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.54 | 39.0 | 3.65e-01 | 97.0% | 58.9% |
| 1s28A00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.53 | 41.0 | 3.74e-01 | 100.0% | 62.3% |
| 3mjgX03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 45.0 | 4.50e-01 | 96.0% | 93.1% |
| 3eniC00 | 2.50.10.10 | Mainly Beta › Clam › Bacteriochlorophyll-a Protein › Bacteriochlorophyll A | 0.50 | 43.0 | 3.04e-01 | 98.0% | 38.2% |
| 4w64B00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.50 | 43.0 | 3.71e-01 | 96.0% | 81.2% |
ECOD (59)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4515771 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.71 | 46.0 | 4.65e-01 | 96.0% | 66.0% |
| 3368757 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.70 | 46.0 | 4.71e-01 | 96.0% | 69.5% |
| 3645785 | 304.8.1.57 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_ACR_D1 | 0.68 | 44.0 | 4.33e-01 | 96.0% | 61.9% |
| 4217713 | 327.21.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › SpoIIE regulatory domain › SpoIIE regulatory domain › PF31108 | 0.66 | 43.0 | 4.64e-01 | 93.9% | 77.6% |
| 3382396 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.66 | 42.0 | 4.51e-01 | 96.0% | 75.3% |
| 3328050 | 304.8.1.57 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_ACR_D1 | 0.66 | 39.0 | 4.38e-01 | 93.9% | 77.3% |
| 3594244 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.65 | 44.0 | 4.44e-01 | 91.9% | 69.4% |
| 3643150 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.64 | 41.0 | 4.38e-01 | 96.0% | 75.3% |
| 3817811 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.64 | 40.0 | 4.30e-01 | 96.0% | 74.1% |
| 4398167 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.64 | 43.0 | 4.50e-01 | 96.0% | 77.3% |
| 3937103 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.64 | 48.0 | 4.35e-01 | 97.0% | 58.5% |
| 4656385 | 304.8.1.47 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_ACR9_3rd | 0.64 | 41.0 | 4.34e-01 | 96.0% | 75.3% |
| 3959682 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.63 | 46.0 | 5.16e-01 | 100.0% | 100.0% |
| 4885937 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.63 | 41.0 | 4.23e-01 | 96.0% | 71.1% |
| 3837690 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.63 | 37.0 | 4.19e-01 | 88.9% | 76.0% |
| 3826658 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.62 | 40.0 | 4.28e-01 | 96.0% | 76.5% |
| 4447560 | 306.7.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › Trigger factor ribosome-binding domain › Trigger factor ribosome-binding domain › Trigger_N | 0.62 | 54.0 | 5.31e-01 | 96.0% | 89.5% |
| 3592353 | 304.34.1.0 ↗ | a+b two layers › Alpha-beta plaits › Nucleoside diphosphate kinases › Nucleoside diphosphate kinases | 0.62 | 38.0 | 3.86e-01 | 87.9% | 61.0% |
| 3816023 | 304.8.1.45 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant | 0.62 | 39.0 | 4.30e-01 | 96.0% | 80.0% |
| 4500602 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.62 | 41.0 | 4.25e-01 | 96.0% | 71.6% |
| 3305653 | 304.8.1.45 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant | 0.61 | 37.0 | 4.21e-01 | 93.9% | 84.3% |
| 4138832 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.61 | 40.0 | 4.22e-01 | 96.0% | 75.3% |
| 4248471 | 304.8.1.57 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_ACR_D1 | 0.61 | 40.0 | 4.20e-01 | 96.0% | 74.4% |
| 4409327 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.61 | 40.0 | 3.95e-01 | 94.9% | 62.9% |
| 3367471 | 304.8.1.45 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant | 0.60 | 35.0 | 3.95e-01 | 89.9% | 78.6% |
| 3804630 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.60 | 43.0 | 4.03e-01 | 98.0% | 60.0% |
| 3353358 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.60 | 37.0 | 4.00e-01 | 89.9% | 75.0% |
| 4298844 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.60 | 39.0 | 3.96e-01 | 96.0% | 67.4% |
| 3420127 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.60 | 38.0 | 4.08e-01 | 96.0% | 75.3% |
| 3459288 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.60 | 36.0 | 3.98e-01 | 88.9% | 77.3% |
| 4665602 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.60 | 40.0 | 4.06e-01 | 96.0% | 70.5% |
| 4182726 | 304.8.1.9 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_6 | 0.59 | 34.0 | 3.54e-01 | 83.8% | 59.6% |
| 4943313 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.58 | 34.0 | 3.65e-01 | 86.9% | 65.9% |
| 3990697 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.58 | 37.0 | 3.82e-01 | 87.9% | 66.3% |
| 3468691 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.58 | 39.0 | 4.13e-01 | 96.0% | 77.5% |
| 3377982 | 304.8.1.57 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_ACR_D1 | 0.58 | 38.0 | 3.97e-01 | 94.9% | 73.3% |
| 5076621 | 304.8.1.9 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_6 | 0.58 | 35.0 | 3.61e-01 | 86.9% | 63.3% |
| 3508173 | 310.3.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related | 0.57 | 40.0 | 4.08e-01 | 90.9% | 74.7% |
| 3378122 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.57 | 35.0 | 3.25e-01 | 90.9% | 46.2% |
| 3421851 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.57 | 37.0 | 3.49e-01 | 89.9% | 52.0% |
| 4976988 | 304.8.1.9 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_6 | 0.57 | 34.0 | 3.55e-01 | 84.8% | 63.3% |
| 3492450 | 872.3.1.5 ↗ | a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_2 | 0.57 | 43.0 | 4.26e-01 | 84.8% | 75.0% |
| 3667551 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.56 | 34.0 | 3.59e-01 | 92.9% | 65.6% |
| 3451456 | 304.8.1.45 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant | 0.56 | 39.0 | 4.05e-01 | 97.0% | 76.8% |
| 3234985 | 273.1.1.1 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP | 0.55 | 48.0 | 3.99e-01 | 100.0% | 53.2% |
| 3697109 | 880.1.1.1 ↗ | a+b duplicates or obligate multimers › ADC synthase › ADC synthase › ADC synthase › Chorismate_bind | 0.54 | 48.0 | 3.07e-01 | 100.0% | 67.7% |
| 3413091 | 872.3.1.5 ↗ | a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_2 | 0.54 | 43.0 | 4.26e-01 | 85.9% | 89.5% |
| 3943851 | 213.1.1.60 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_5 | 0.54 | 47.0 | 3.44e-01 | 98.0% | 76.5% |
| 3186484 | 302.1.1.0 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain | 0.54 | 43.0 | 4.49e-01 | 84.8% | 94.4% |
| 4124818 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.54 | 36.0 | 3.73e-01 | 100.0% | 74.4% |
| 3387259 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.54 | 35.0 | 3.73e-01 | 100.0% | 80.0% |
| 4249240 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.53 | 36.0 | 3.64e-01 | 94.9% | 69.7% |
| 5075648 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.53 | 37.0 | 3.78e-01 | 100.0% | 75.8% |
| 4965043 | 328.5.1.1 ↗ | a+b two layers › IF3-like › SirA-like › SirA-like › TusA | 0.53 | 39.0 | 4.38e-01 | 94.9% | 100.0% |
| 3384789 | 304.8.1.45 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant | 0.53 | 42.0 | 4.11e-01 | 97.0% | 78.2% |
| 3367924 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.52 | 36.0 | 3.39e-01 | 94.9% | 58.3% |
| 4474145 | 2003.1.5.25 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GidB | 0.52 | 38.0 | 2.94e-01 | 77.8% | 92.4% |
| 3905894 | 11.1.1.873 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_CNNM4_N | 0.51 | 44.0 | 3.89e-01 | 100.0% | 73.3% |
| 4093457 | 2003.1.5.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_2 | 0.50 | 44.0 | 3.23e-01 | 96.0% | 69.4% |
D4
medium
residues 1010-1034_1249-1333
D5
medium
residues 1334-1443_1463-1523_1658-1727
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1y4cA03 | 1.20.120.660 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › IL-4 antagonist (De novo design) like domain | 0.72 | 20.0 | 3.03e-01 | 87.1% | 54.0% |
| 4dtdA02 | 1.10.3680.20 | Mainly Alpha › Orthogonal Bundle › TerB-like › Actin cross-linking domain | 0.61 | 27.0 | 3.46e-01 | 95.9% | 69.3% |
| 2zy9A03 | 1.10.357.20 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › SLC41 divalent cation transporters, integral membrane domain | 0.57 | 35.0 | 4.06e-01 | 92.5% | 83.9% |
| 4p9tA01 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.56 | 24.0 | 3.31e-01 | 99.6% | 77.5% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3509455 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.56 | 27.0 | 3.30e-01 | 98.3% | 68.1% |
| 3386452 | 5050.1.1.21 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › FTR1 | 0.56 | 26.0 | 3.27e-01 | 88.0% | 71.0% |
| 5049791 | 601.7.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HepT-like | 0.53 | 25.0 | 3.28e-01 | 97.9% | 75.7% |
| 3739490 | 3939.1.1.374 ↗ | alpha duplicates or obligate multimers › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › PF30554 | 0.51 | 22.0 | 2.26e-01 | 75.1% | 37.6% |
D6
medium
residues 1524-1646
D7
medium
residues 1740-1856