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gwa1_scaffold_31_prodigal-single.1__X__X__00127
Bact-Virgwa1_scaffold_31_prodigal-single.1__X__X__00127
Identity
- Kingdom:
- phage
Quality
88.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 22-85
Domain cluster:
representative
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ztaA00 | 1.10.490.130 | Mainly Alpha › Orthogonal Bundle › Globin-like › | 0.83 | 74.0 | 5.73e-01 | 100.0% | 80.6% |
| 4w4kA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.80 | 72.0 | 6.63e-01 | 100.0% | 80.5% |
| 3eslA01 | 1.20.58.2070 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.79 | 55.0 | 5.24e-01 | 78.1% | 62.7% |
| 3icxA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.77 | 65.0 | 6.20e-01 | 93.8% | 78.7% |
| 4e6hA00 | 1.25.40.1040 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.77 | 64.0 | 3.69e-01 | 89.1% | 30.6% |
| 2oznB01 | 1.20.1270.90 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › AF1782-like | 0.76 | 54.0 | 4.98e-01 | 73.4% | 63.7% |
| 2kp8A00 | 1.20.5.170 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.76 | 66.0 | 6.41e-01 | 100.0% | 95.8% |
| 3owaA03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.74 | 66.0 | 4.78e-01 | 98.4% | 42.1% |
| 1kmiZ02 | 1.10.287.500 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.74 | 64.0 | 5.12e-01 | 100.0% | 51.5% |
| 3bvoA02 | 1.20.1280.20 | Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain | 0.73 | 54.0 | 4.87e-01 | 89.1% | 58.1% |
| 1s35A01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.73 | 61.0 | 5.14e-01 | 89.1% | 56.4% |
| 1e3gA00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.70 | 64.0 | 4.20e-01 | 100.0% | 82.8% |
| 8alzB08 | 1.10.3380.10 | Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › Sec63 N-terminal domain-like domain | 0.69 | 52.0 | 4.07e-01 | 79.7% | 74.8% |
| 1owlA02 | 1.25.40.80 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.69 | 50.0 | 4.02e-01 | 76.6% | 100.0% |
| 2ckoA02 | 3.90.1200.10 | Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe | 0.68 | 55.0 | 3.62e-01 | 89.1% | 81.3% |
| 1ij5A01 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.67 | 57.0 | 5.47e-01 | 96.9% | 82.9% |
| 2lpeA01 | 6.10.140.1120 | Special › Helix non-globular › Helix Hairpins › | 0.59 | 47.0 | 4.44e-01 | 89.1% | 76.9% |
| 1dmhA00 | 2.60.130.10 | Mainly Beta › Sandwich › Protocatechuate 3,4-Dioxygenase, subunit A › Aromatic compound dioxygenase | 0.59 | 41.0 | 2.64e-01 | 73.4% | 15.2% |
ECOD (26)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3267437 | 101.1.1.196 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › RWP-RK | 0.88 | 65.0 | 5.66e-01 | 76.6% | 54.4% |
| 3967290 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.88 | 66.0 | 6.43e-01 | 79.7% | 77.1% |
| 3855880 | 622.4.1.19 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related › CD20 | 0.86 | 73.0 | 6.10e-01 | 96.9% | 55.2% |
| 3386718 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.85 | 77.0 | 5.66e-01 | 100.0% | 78.0% |
| 3274860 | 109.25.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › GPCR-autoproteolysis inducing domain subdomain A › GPCR-autoproteolysis inducing domain subdomain A | 0.84 | 63.0 | 4.46e-01 | 79.7% | 31.9% |
| 3470751 | 3755.3.1.297 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › KIF9 | 0.84 | 73.0 | 5.22e-01 | 90.6% | 53.1% |
| 5081048 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.83 | 62.0 | 4.15e-01 | 78.1% | 23.3% |
| 4034092 | 150.5.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like | 0.83 | 71.0 | 6.69e-01 | 100.0% | 78.7% |
| 3607086 | 4992.1.1.0 ↗ | extended segments › RelB-like › RelB-like › RelB-like | 0.83 | 69.0 | 6.40e-01 | 95.3% | 72.5% |
| 3608012 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.82 | 69.0 | 6.25e-01 | 95.3% | 68.2% |
| 4574972 | 192.7.1.0 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm | 0.81 | 64.0 | 6.59e-01 | 93.8% | 90.0% |
| 3722750 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.80 | 71.0 | 4.49e-01 | 100.0% | 68.4% |
| 3594129 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.79 | 72.0 | 4.88e-01 | 98.4% | 31.2% |
| 3405911 | 4207.1.1.3 ↗ | alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › RNA polymerase II holoenzyme component SRB7 (MED21) › Med9 | 0.79 | 73.0 | 6.43e-01 | 98.4% | 76.7% |
| 3456370 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.78 | 69.0 | 5.23e-01 | 100.0% | 41.3% |
| 3840124 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.78 | 64.0 | 5.13e-01 | 90.6% | 46.4% |
| 3441901 | 632.1.1.13 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain › Rx_N | 0.77 | 55.0 | 5.09e-01 | 81.2% | 60.0% |
| 3600361 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.76 | 61.0 | 5.36e-01 | 87.5% | 65.3% |
| 3267156 | 633.24.1.0 ↗ | alpha bundles › Bromodomain-like › RABEX-5 helical domain › RABEX-5 helical domain | 0.76 | 53.0 | 4.59e-01 | 73.4% | 48.0% |
| 3423999 | 601.1.2.74 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › Rx_N | 0.73 | 64.0 | 4.98e-01 | 98.4% | 45.7% |
| 3705683 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.72 | 53.0 | 4.59e-01 | 87.5% | 51.0% |
| 3385780 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.71 | 65.0 | 5.13e-01 | 100.0% | 88.8% |
| 4142309 | 4163.1.1.1 ↗ | alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF1 N-terminal domain-like › Sld5 | 0.71 | 61.0 | 4.61e-01 | 98.4% | 75.0% |
| 3475514 | 605.1.1.95 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › TADA2A-like_3rd | 0.65 | 53.0 | 5.13e-01 | 93.8% | 80.0% |
| 3706043 | 323.1.1.6 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Carn_acyltransf | 0.64 | 51.0 | 3.85e-01 | 87.5% | 39.4% |
| 3934503 | 614.1.1.1 ↗ | alpha duplicates or obligate multimers › L27 domain › L27 domain › L27 domain › L27 | 0.63 | 45.0 | 4.85e-01 | 81.2% | 100.0% |