←Back to structures
gwa1_scaffold_31_prodigal-single.1__X__X__00242
Bact-Virgwa1_scaffold_31_prodigal-single.1__X__X__00242
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-216
Domain cluster:
rep: adenylosuccinate_synthetase__YP_009000992__Pithovirus_sibericum__1450746__D5-109_198-265
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00709.28 best | Adenylsucc_synt | 111.5 | 5.90e-32 | 69.6% | 35.6% |
| PF00709.28 | Adenylsucc_synt | 53.7 | 2.10e-14 | 31.8% | 16.6% |
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1adeA01 | 3.40.440.10 | Alpha Beta › 3-Layer(aba) Sandwich › Adenylosuccinate Synthetase; Chain A, domain 1 › Adenylosuccinate Synthetase, subunit A, domain 1 | 0.90 | 68.0 | 7.79e-01 | 100.0% | 99.4% |
| 1yr7A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.67 | 42.0 | 4.04e-01 | 99.5% | 53.7% |
| 1wdeA01 | 3.40.1010.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cobalt-precorrin-4 Transmethylase; domain 1 › Tetrapyrrole methylase, N-terminal domain | 0.64 | 35.0 | 4.55e-01 | 100.0% | 96.5% |
| 6mjgA01 | 3.40.1010.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cobalt-precorrin-4 Transmethylase; domain 1 › Tetrapyrrole methylase, N-terminal domain | 0.63 | 35.0 | 4.57e-01 | 99.5% | 95.9% |
| 2dsgA01 | 3.40.1010.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cobalt-precorrin-4 Transmethylase; domain 1 › Tetrapyrrole methylase, N-terminal domain | 0.62 | 34.0 | 4.51e-01 | 100.0% | 98.2% |
| 1xjcA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.61 | 27.0 | 3.30e-01 | 99.5% | 62.5% |
| 6yb3A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 40.0 | 3.85e-01 | 99.1% | 60.8% |
| 4iqfB01 | 3.40.50.170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Formyl transferase, N-terminal domain | 0.58 | 31.0 | 3.16e-01 | 100.0% | 51.0% |
| 4ap9A01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.56 | 33.0 | 3.93e-01 | 100.0% | 86.3% |
| 1a1vA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 34.0 | 4.08e-01 | 100.0% | 93.3% |
| 2zpaA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 33.0 | 4.00e-01 | 100.0% | 90.4% |
| 3do6A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 39.0 | 3.44e-01 | 100.0% | 50.0% |
| 2iksB02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.55 | 32.0 | 3.48e-01 | 72.0% | 68.2% |
| 2ekdA00 | 3.40.50.11570 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Protein of unknown function DUF257 | 0.54 | 41.0 | 4.27e-01 | 100.0% | 82.7% |
| 1pg5A02 | 3.40.50.1370 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase | 0.54 | 37.0 | 4.34e-01 | 93.5% | 100.0% |
| 3cs3A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.54 | 32.0 | 3.96e-01 | 94.4% | 91.3% |
| 4jbeA02 | 3.40.309.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 2 › Aldehyde Dehydrogenase; Chain A, domain 2 | 0.53 | 34.0 | 4.03e-01 | 86.9% | 95.7% |
| 4hi0E00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 35.0 | 3.69e-01 | 100.0% | 73.0% |
| 1z06A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 35.0 | 3.86e-01 | 96.7% | 84.2% |
ECOD (38)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3495929 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.96 | 94.0 | 7.18e-01 | 100.0% | 60.2% |
| 4477211 | 2004.1.1.53 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Adenylsucc_synt | 0.96 | 94.0 | 7.17e-01 | 100.0% | 61.9% |
| 4472870 | 2004.1.1.53 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Adenylsucc_synt | 0.96 | 94.0 | 6.99e-01 | 100.0% | 61.6% |
| 4036208 | 2004.1.1.53 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Adenylsucc_synt | 0.96 | 94.0 | 7.09e-01 | 100.0% | 61.4% |
| 4942154 | 2004.1.1.53 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Adenylsucc_synt | 0.96 | 94.0 | 7.35e-01 | 100.0% | 56.9% |
| 4353609 | 2004.1.1.53 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Adenylsucc_synt | 0.96 | 94.0 | 7.06e-01 | 100.0% | 60.0% |
| 4639006 | 2004.1.1.53 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Adenylsucc_synt | 0.95 | 90.0 | 8.27e-01 | 95.8% | 98.1% |
| 1883519 | 2004.1.1.53 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Adenylsucc_synt | 0.95 | 93.0 | 7.06e-01 | 100.0% | 61.5% |
| 4933558 | 2004.1.1.53 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Adenylsucc_synt | 0.95 | 93.0 | 7.05e-01 | 100.0% | 61.2% |
| 4203696 | 2004.1.1.53 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Adenylsucc_synt | 0.94 | 92.0 | 6.83e-01 | 99.5% | 59.8% |
| 4291957 | 2004.1.1.53 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Adenylsucc_synt | 0.94 | 92.0 | 6.92e-01 | 100.0% | 57.5% |
| 4180893 | 2004.1.1.53 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Adenylsucc_synt | 0.94 | 92.0 | 6.94e-01 | 100.0% | 58.9% |
| 5056176 | 2004.1.1.53 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Adenylsucc_synt | 0.94 | 92.0 | 7.43e-01 | 99.5% | 60.0% |
| 4036504 | 2004.1.1.53 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Adenylsucc_synt | 0.94 | 92.0 | 7.63e-01 | 100.0% | 64.5% |
| 3066560 | 2004.1.1.53 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Adenylsucc_synt | 0.94 | 91.0 | 7.36e-01 | 100.0% | 64.2% |
| 4258627 | 2004.1.1.53 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Adenylsucc_synt | 0.94 | 91.0 | 6.92e-01 | 100.0% | 60.9% |
| 3288460 | 2004.1.1.53 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Adenylsucc_synt | 0.94 | 91.0 | 7.06e-01 | 100.0% | 64.1% |
| 4644713 | 2004.1.1.53 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Adenylsucc_synt | 0.94 | 91.0 | 7.03e-01 | 100.0% | 62.7% |
| 3599285 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.93 | 91.0 | 6.41e-01 | 100.0% | 47.7% |
| 5024558 | 2004.1.1.53 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Adenylsucc_synt | 0.93 | 91.0 | 6.91e-01 | 100.0% | 60.7% |
| 4158935 | 2004.1.1.53 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Adenylsucc_synt | 0.93 | 89.0 | 6.85e-01 | 97.7% | 62.7% |
| 4624820 | 2004.1.1.53 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Adenylsucc_synt | 0.93 | 91.0 | 6.30e-01 | 100.0% | 50.4% |
| 4259208 | 2004.1.1.53 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Adenylsucc_synt | 0.91 | 86.0 | 6.67e-01 | 97.2% | 61.4% |
| 2772441 | 2004.1.1.53 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Adenylsucc_synt | 0.89 | 86.0 | 7.07e-01 | 100.0% | 63.7% |
| 5015519 | 2004.1.1.67 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CbiA | 0.74 | 41.0 | 5.45e-01 | 100.0% | 97.5% |
| 4090697 | 2004.1.1.201 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_26 | 0.66 | 43.0 | 4.24e-01 | 99.5% | 60.9% |
| 5063868 | 2004.1.1.101 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MeaB | 0.64 | 36.0 | 3.34e-01 | 100.0% | 43.7% |
| 4989109 | 2004.1.1.88 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › cobW | 0.63 | 36.0 | 3.77e-01 | 100.0% | 58.0% |
| 4965223 | 2004.1.1.88 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › cobW | 0.63 | 37.0 | 3.66e-01 | 100.0% | 53.9% |
| 3967449 | 2004.1.1.88 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › cobW | 0.62 | 39.0 | 3.70e-01 | 100.0% | 52.7% |
| 3255169 | 2004.1.1.88 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › cobW | 0.60 | 37.0 | 3.49e-01 | 100.0% | 50.0% |
| 5063684 | 2004.1.1.50 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Guanylate_kin | 0.59 | 34.0 | 3.27e-01 | 100.0% | 49.0% |
| 4982630 | 2004.1.1.67 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CbiA | 0.59 | 39.0 | 3.77e-01 | 99.5% | 57.9% |
| 5073559 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.53 | 47.0 | 4.27e-01 | 100.0% | 71.3% |
| 5009886 | 3110.1.1.0 ↗ | a/b three-layered sandwiches › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain | 0.53 | 34.0 | 3.99e-01 | 93.9% | 93.8% |
| 3239957 | 2007.2.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II | 0.52 | 32.0 | 3.59e-01 | 100.0% | 75.9% |
| 3320511 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.51 | 37.0 | 3.31e-01 | 100.0% | 53.4% |
| 4987660 | 4244.1.1.0 ↗ | a/b three-layered sandwiches › EreA/ChaN-like › EreA/ChaN-like › EreA/ChaN-like | 0.51 | 38.0 | 4.02e-01 | 96.3% | 85.6% |
D2
high
residues 217-331
Domain cluster:
rep: IMGVR_UViG_3300020473_000086-3300020473-Ga0211625_100010061__D217-326
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00709.28 best | Adenylsucc_synt | 57.0 | 2.00e-15 | 97.4% | 20.0% |