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gwa1_scaffold_31_prodigal-single.1__X__X__00281
Bact-Virgwa1_scaffold_31_prodigal-single.1__X__X__00281
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-80_131-156_197-244
D2
medium
residues 81-130_157-196
Domain cluster:
representative
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2g7jA00 | 3.90.1150.40 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Protein of unknown function DUF2002 | 0.71 | 41.0 | 3.84e-01 | 90.0% | 47.3% |
| 3vn5A01 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.67 | 40.0 | 4.49e-01 | 94.4% | 78.3% |
| 5ih0A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.63 | 43.0 | 4.30e-01 | 71.1% | 100.0% |
| 4i8oA02 | 3.30.160.690 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Bacterial toxin RNase RnlA/LsoA, N repeated domain | 0.62 | 45.0 | 4.55e-01 | 97.8% | 75.6% |
| 2jpiA00 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.61 | 41.0 | 4.03e-01 | 97.8% | 64.6% |
| 3m2oA01 | 3.30.720.120 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.60 | 35.0 | 4.35e-01 | 90.0% | 98.1% |
| 4rt5A00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.59 | 38.0 | 3.73e-01 | 98.9% | 58.4% |
| 1cqaA00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.59 | 51.0 | 4.63e-01 | 96.7% | 74.8% |
| 2x4jA01 | 2.30.30.600 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 39.0 | 3.79e-01 | 70.0% | 100.0% |
| 3h27A00 | 3.50.50.100 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › | 0.58 | 47.0 | 3.00e-01 | 86.7% | 93.9% |
| 1yprA00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.58 | 51.0 | 4.56e-01 | 97.8% | 73.6% |
| 1jqpA01 | 2.40.128.80 | Mainly Beta › Beta Barrel › Lipocalin › Cathepsin C, exclusion domain | 0.58 | 42.0 | 3.92e-01 | 76.7% | 92.0% |
| 1jovA00 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.56 | 41.0 | 2.99e-01 | 77.8% | 94.1% |
| 2xvlA01 | 2.60.40.1760 | Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) | 0.56 | 43.0 | 3.16e-01 | 81.1% | 73.9% |
| 1m3qA01 | 3.30.310.40 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.56 | 42.0 | 4.22e-01 | 100.0% | 79.8% |
| 2ogqA01 | 3.30.1120.30 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain | 0.56 | 40.0 | 3.63e-01 | 76.7% | 70.6% |
| 1ul7A00 | 3.30.310.80 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 | 0.55 | 44.0 | 4.23e-01 | 96.7% | 75.5% |
| 7x36A01 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.55 | 43.0 | 2.89e-01 | 82.2% | 31.4% |
| 1q8mA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 39.0 | 3.56e-01 | 98.9% | 56.2% |
| 5f7uA02 | 2.60.40.1760 | Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) | 0.54 | 44.0 | 3.26e-01 | 87.8% | 42.0% |
| 1hxnA00 | 2.110.10.10 | Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain | 0.53 | 39.0 | 3.00e-01 | 77.8% | 36.7% |
| 2x8fA02 | 2.40.128.10 | Mainly Beta › Beta Barrel › Lipocalin › | 0.52 | 38.0 | 3.76e-01 | 76.7% | 91.6% |
| 1xipA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 45.0 | 3.05e-01 | 100.0% | 96.5% |
| 1lfoA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.52 | 43.0 | 3.92e-01 | 94.4% | 82.7% |
| 4cc9A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 45.0 | 3.16e-01 | 100.0% | 99.3% |
| 3h1tA01 | 3.90.1570.30 | Alpha Beta › Alpha-Beta Complex › tt1808, chain A › | 0.51 | 37.0 | 3.28e-01 | 76.7% | 81.8% |
| 2hjjA00 | 3.30.160.130 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › ykff protein like domains | 0.51 | 31.0 | 3.45e-01 | 85.6% | 81.8% |
| 2iiiA00 | 3.60.90.10 | Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase | 0.50 | 40.0 | 3.73e-01 | 98.9% | 67.5% |
| 2bmoA01 | 3.90.380.10 | Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 | 0.50 | 45.0 | 3.11e-01 | 100.0% | 51.0% |
| 2f2hA01 | 2.60.40.1760 | Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) | 0.50 | 40.0 | 2.97e-01 | 87.8% | 93.5% |
ECOD (49)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5028597 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.74 | 43.0 | 4.53e-01 | 96.7% | 65.0% |
| 4982613 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.72 | 40.0 | 4.69e-01 | 87.8% | 76.9% |
| 5041453 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.72 | 47.0 | 4.85e-01 | 97.8% | 70.6% |
| 6638 | 241.7.1.2 ↗ | a+b two layers › Type III secretory system chaperone-like › YgaC/TfoX-N like › YgaC/TfoX-N like › DUF2002 | 0.71 | 41.0 | 3.84e-01 | 90.0% | 47.3% |
| 4937221 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.70 | 43.0 | 4.70e-01 | 100.0% | 74.7% |
| 5067782 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.69 | 43.0 | 4.82e-01 | 93.3% | 81.4% |
| 4944418 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.69 | 45.0 | 4.88e-01 | 100.0% | 80.0% |
| 5028032 | 331.1.1.1 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › TBP | 0.68 | 45.0 | 4.70e-01 | 98.9% | 71.8% |
| 4993386 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.68 | 45.0 | 4.49e-01 | 100.0% | 65.3% |
| 4659650 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.65 | 40.0 | 4.09e-01 | 97.8% | 62.2% |
| 4679871 | 331.1.1.6 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › DUF3378 | 0.65 | 38.0 | 4.07e-01 | 93.3% | 66.3% |
| 4968280 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.64 | 45.0 | 4.56e-01 | 98.9% | 73.3% |
| 4995145 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.64 | 43.0 | 4.48e-01 | 94.4% | 74.1% |
| 3270933 | 223.2.1.1 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Profilin | 0.61 | 54.0 | 4.86e-01 | 97.8% | 69.6% |
| 3687353 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.60 | 48.0 | 3.80e-01 | 87.8% | 68.4% |
| 3249981 | 223.2.1.1 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Profilin | 0.60 | 54.0 | 4.80e-01 | 98.9% | 72.0% |
| 5009785 | 321.1.1.0 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase | 0.59 | 44.0 | 3.60e-01 | 100.0% | 41.1% |
| 3684135 | 5.1.3.67 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 | 0.59 | 43.0 | 2.92e-01 | 76.7% | 27.0% |
| 3998928 | 5.1.5.236 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_WDR3_1st | 0.59 | 43.0 | 3.30e-01 | 76.7% | 37.9% |
| 3268245 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.58 | 39.0 | 3.82e-01 | 75.6% | 62.0% |
| 3226791 | 223.2.1.1 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Profilin | 0.58 | 51.0 | 4.62e-01 | 97.8% | 72.8% |
| 6880 | 223.2.1.1 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Profilin | 0.58 | 51.0 | 4.56e-01 | 97.8% | 73.6% |
| 3250283 | 223.2.1.1 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Profilin | 0.57 | 51.0 | 4.50e-01 | 97.8% | 70.0% |
| 3537449 | 223.2.1.1 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Profilin | 0.57 | 51.0 | 4.52e-01 | 98.9% | 72.9% |
| 4584943 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.57 | 36.0 | 4.00e-01 | 72.2% | 81.4% |
| 3487629 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.56 | 49.0 | 4.34e-01 | 97.8% | 71.1% |
| 3757523 | 11.1.1.99 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set | 0.56 | 40.0 | 3.48e-01 | 98.9% | 46.9% |
| 3509095 | 3425.2.1.3 ↗ | a+b three layers › Two-component system yycF/yycG regulatory protein yycH-like › YycH C-terminal domain › YycH C-terminal domain › PF29809 | 0.56 | 49.0 | 3.34e-01 | 97.8% | 27.0% |
| 3882452 | 633.23.1.1 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › PMP22_Claudin | 0.56 | 39.0 | 3.06e-01 | 73.3% | 93.5% |
| 3445390 | 305.2.1.0 ↗ | a+b two layers › DCoH-like › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) | 0.55 | 43.0 | 4.05e-01 | 100.0% | 67.0% |
| 3628751 | 331.18.1.0 ↗ | a+b two layers › TBP-like › C-terminal TBP-like domain of Roc › C-terminal TBP-like domain of Roc | 0.55 | 45.0 | 3.60e-01 | 100.0% | 43.2% |
| 3470353 | 223.2.1.1 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Profilin | 0.55 | 49.0 | 4.40e-01 | 100.0% | 71.9% |
| 3508465 | 601.23.1.4 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III | 0.55 | 41.0 | 2.96e-01 | 78.9% | 78.1% |
| 3605770 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.55 | 48.0 | 3.58e-01 | 97.8% | 86.7% |
| 3709449 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.54 | 40.0 | 2.77e-01 | 77.8% | 27.5% |
| 3381691 | 601.23.1.4 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III | 0.54 | 41.0 | 2.82e-01 | 81.1% | 65.9% |
| 1318709 | 59.1.4.1 ↗ | beta complex topology › triple barrel › triple barrel › TFIID subunits TAF1-TAF7 › TAFII55_N | 0.53 | 38.0 | 2.85e-01 | 75.6% | 38.4% |
| 3782688 | 59.1.4.1 ↗ | beta complex topology › triple barrel › triple barrel › TFIID subunits TAF1-TAF7 › TAFII55_N | 0.53 | 38.0 | 3.03e-01 | 74.4% | 50.9% |
| 3593313 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.53 | 37.0 | 2.89e-01 | 72.2% | 90.0% |
| 3621723 | 5069.1.3.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits | 0.53 | 45.0 | 3.27e-01 | 93.3% | 84.0% |
| 5077873 | 4.1.1.40 ↗ | beta barrels › SH3 › SH3 › SH3 › FeoA | 0.52 | 36.0 | 3.84e-01 | 73.3% | 82.3% |
| 3383213 | 5.1.3.67 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 | 0.52 | 48.0 | 3.23e-01 | 97.8% | 85.6% |
| 4646778 | 12.3.1.19 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Gal_mutarotas_2 | 0.52 | 42.0 | 3.03e-01 | 87.8% | 43.8% |
| 2325573 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.52 | 40.0 | 3.27e-01 | 84.4% | 78.0% |
| 4938623 | 881.1.1.45 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PF26686 | 0.52 | 47.0 | 3.87e-01 | 100.0% | 74.7% |
| 3506428 | 220.1.1.168 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Tmpp129 | 0.52 | 40.0 | 3.48e-01 | 82.2% | 77.8% |
| 5042309 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.51 | 36.0 | 3.63e-01 | 72.2% | 87.8% |
| 5028595 | 283.2.1.0 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like | 0.51 | 41.0 | 3.48e-01 | 91.1% | 89.3% |
| 3261418 | 5.1.4.453 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Kelch_KLHDC2_KLHL20_DRC7 | 0.50 | 43.0 | 2.90e-01 | 97.8% | 97.6% |