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gwd2_scaffold_22_prodigal-single.1__X__X__00133
Bact-Virgwd2_scaffold_22_prodigal-single.1__X__X__00133
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-124
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF06949.17 best | DUF1292 | 24.1 | 7.50e-05 | 48.4% | 64.5% |
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6bogA02 | 2.30.30.930 | Mainly Beta › Roll › SH3 type barrels. › | 0.75 | 37.0 | 5.20e-01 | 91.8% | 98.3% |
| 1y96A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 39.0 | 4.56e-01 | 91.0% | 88.4% |
| 2lqkA00 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.59 | 33.0 | 4.16e-01 | 100.0% | 95.7% |
| 2ig6A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.54 | 41.0 | 3.91e-01 | 87.7% | 67.8% |
| 7xpkA01 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.53 | 45.0 | 4.27e-01 | 90.2% | 98.6% |
| 3jv1A00 | 3.10.280.10 | Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein | 0.52 | 46.0 | 4.05e-01 | 100.0% | 64.8% |
| 1sp4B00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.50 | 38.0 | 3.20e-01 | 96.7% | 47.3% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4523548 | 4.8.1.35 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DUF1292 | 0.75 | 51.0 | 6.07e-01 | 77.9% | 100.0% |
| 4069543 | 4.8.1.6 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot | 0.70 | 38.0 | 4.71e-01 | 91.0% | 85.3% |
| 5035742 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 35.0 | 4.89e-01 | 91.8% | 100.0% |
| 3570368 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.68 | 37.0 | 4.10e-01 | 95.1% | 65.0% |
| 3905549 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.68 | 37.0 | 4.03e-01 | 92.6% | 62.9% |
| 4938919 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 35.0 | 4.66e-01 | 93.4% | 93.8% |
| 5066224 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.67 | 36.0 | 4.17e-01 | 97.5% | 71.1% |
| 3409587 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.65 | 36.0 | 4.10e-01 | 95.1% | 72.2% |
| 3387119 | 4.31.1.1 ↗ | beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL | 0.61 | 38.0 | 4.32e-01 | 89.3% | 83.3% |
| 3279470 | 4.31.1.1 ↗ | beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL | 0.61 | 39.0 | 4.49e-01 | 79.5% | 87.8% |
| 3281271 | 4.31.1.1 ↗ | beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL | 0.59 | 39.0 | 4.43e-01 | 81.1% | 90.0% |
| 3959770 | 4.31.1.0 ↗ | beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 | 0.59 | 37.0 | 4.28e-01 | 86.1% | 86.7% |
| 4545520 | 4.7.1.7 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › WYL | 0.58 | 38.0 | 4.41e-01 | 86.1% | 94.1% |
| 3519884 | 4.1.1.20 ↗ | beta barrels › SH3 › SH3 › SH3 › BAH | 0.58 | 43.0 | 4.76e-01 | 98.4% | 94.0% |
| 3953109 | 4.31.1.1 ↗ | beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL | 0.58 | 38.0 | 4.20e-01 | 86.1% | 84.2% |
| 3936130 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 41.0 | 4.57e-01 | 91.0% | 93.7% |
| 3624163 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 39.0 | 4.52e-01 | 89.3% | 96.7% |
| 3232582 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 37.0 | 4.19e-01 | 85.2% | 86.3% |
| 3574742 | 4.1.1.47 ↗ | beta barrels › SH3 › SH3 › SH3 › Gemin6 | 0.57 | 39.0 | 4.50e-01 | 89.3% | 96.7% |
| 4031510 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 39.0 | 4.46e-01 | 88.5% | 96.7% |
| 3281618 | 4.31.1.1 ↗ | beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL | 0.55 | 41.0 | 4.54e-01 | 81.1% | 95.0% |
| 3237402 | 5084.4.1.2 ↗ | beta barrels › Outer membrane meander beta-barrels › Outer membrane phospholipase A (OMPLA) › Outer membrane phospholipase A (OMPLA) › DUF7042 | 0.53 | 37.0 | 3.49e-01 | 71.3% | 75.9% |
| 3399366 | 9.14.1.3 ↗ | beta barrels › Lipocalins/Streptavidin › Uncharacterized protein YLR301W › Uncharacterized protein YLR301W › DUF7042 | 0.53 | 36.0 | 3.49e-01 | 70.5% | 77.9% |
| 3283097 | 4.31.1.1 ↗ | beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL | 0.53 | 37.0 | 3.94e-01 | 82.0% | 81.8% |
| 1891431 | 9.1.1.28 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Pallilysin | 0.52 | 35.0 | 3.52e-01 | 71.3% | 67.2% |
| 3619927 | 9.2.1.6 ↗ | beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin › DUF7042 | 0.52 | 37.0 | 3.88e-01 | 74.6% | 81.7% |
| 3399368 | 9.14.1.3 ↗ | beta barrels › Lipocalins/Streptavidin › Uncharacterized protein YLR301W › Uncharacterized protein YLR301W › DUF7042 | 0.50 | 37.0 | 3.56e-01 | 75.4% | 87.4% |