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gwd2_scaffold_22_prodigal-single.1__X__X__00139
Bact-Virgwd2_scaffold_22_prodigal-single.1__X__X__00139
Identity
- Kingdom:
- phage
Quality
93.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 35-95
Domain cluster:
representative
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1elkA00 | 1.25.40.90 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.77 | 66.0 | 4.99e-01 | 100.0% | 60.1% |
| 3onkA00 | 1.25.40.90 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.73 | 64.0 | 4.97e-01 | 100.0% | 70.1% |
| 4a17U01 | 1.10.287.310 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.68 | 49.0 | 4.54e-01 | 77.0% | 87.0% |
| 2crbA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.68 | 50.0 | 4.38e-01 | 82.0% | 64.9% |
| 1juqC00 | 1.25.40.90 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.66 | 55.0 | 4.31e-01 | 100.0% | 54.4% |
| 3bwtA00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.65 | 54.0 | 3.49e-01 | 100.0% | 24.3% |
| 7bi4A01 | 1.25.40.70 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Phosphatidylinositol 3-kinase, accessory domain (PIK) | 0.65 | 54.0 | 3.97e-01 | 100.0% | 39.8% |
| 2wbiA01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.64 | 49.0 | 4.09e-01 | 86.9% | 67.8% |
| 3k49A00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.61 | 50.0 | 3.21e-01 | 100.0% | 19.3% |
| 2yw6B00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.59 | 45.0 | 3.53e-01 | 86.9% | 87.3% |
| 3ajfA00 | 1.20.1440.190 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Tenuivirus movement protein | 0.59 | 43.0 | 3.91e-01 | 82.0% | 75.0% |
| 5an3A01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.59 | 47.0 | 3.84e-01 | 93.4% | 58.1% |
| 2cazE00 | 1.20.1440.200 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Vps28 N-terminal domain | 0.57 | 45.0 | 3.94e-01 | 91.8% | 82.2% |
| 3fmsA02 | 1.20.120.530 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like | 0.55 | 39.0 | 3.04e-01 | 77.0% | 61.7% |
| 3t6gB00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.53 | 42.0 | 3.33e-01 | 88.5% | 59.0% |
| 1hy5B00 | 1.20.120.260 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Virulence factor YopE uncharacterised domain | 0.52 | 44.0 | 3.62e-01 | 98.4% | 65.3% |
| 3idwA00 | 1.10.150.50 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 | 0.51 | 37.0 | 3.66e-01 | 78.7% | 95.5% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4012942 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.75 | 65.0 | 5.30e-01 | 100.0% | 74.2% |
| 3348272 | 109.54.1.3 ↗ | alpha superhelices › Repetitive alpha hairpins › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › Utp13 | 0.73 | 63.0 | 5.13e-01 | 100.0% | 60.0% |
| 3540152 | 509.1.1.8 ↗ | alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain › ZSWIM4-8_C | 0.73 | 62.0 | 5.03e-01 | 95.1% | 61.4% |
| 3372218 | 109.27.1.3 ↗ | alpha superhelices › Repetitive alpha hairpins › BACK domain › BACK domain › NPH3 | 0.72 | 62.0 | 6.01e-01 | 100.0% | 94.3% |
| 3232181 | 109.4.1.891 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_HEATR1 | 0.70 | 59.0 | 3.99e-01 | 100.0% | 42.0% |
| 3867474 | 109.6.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ras GEF › Ras GEF › RasGEF,RasGEF_N | 0.70 | 60.0 | 3.60e-01 | 100.0% | 28.4% |
| 3640682 | 109.3.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 | 0.70 | 61.0 | 3.77e-01 | 100.0% | 17.7% |
| 3826428 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.69 | 60.0 | 4.68e-01 | 100.0% | 50.4% |
| 3411779 | 109.25.1.7 ↗ | alpha superhelices › Repetitive alpha hairpins › GPCR-autoproteolysis inducing domain subdomain A › GPCR-autoproteolysis inducing domain subdomain A › PF26588 | 0.66 | 56.0 | 4.67e-01 | 100.0% | 68.7% |
| 4979111 | 604.6.1.0 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain | 0.62 | 48.0 | 4.16e-01 | 86.9% | 82.0% |
| 3529162 | 601.1.1.53 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › Keratin_assoc | 0.57 | 44.0 | 3.76e-01 | 91.8% | 74.8% |
| 5065089 | 2004.1.1.206 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_31 | 0.55 | 46.0 | 3.13e-01 | 98.4% | 78.4% |