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gwd2_scaffold_22_prodigal-single.1__X__X__00167

Bact-Vir

gwd2_scaffold_22_prodigal-single.1__X__X__00167

Identity

Kingdom:
phage

Quality

77.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 78-137
PDB
CATH (22)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2z1cB00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.74 56.0 5.21e-01 100.0% 66.2%
2yyzA02 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.73 53.0 5.45e-01 100.0% 81.0%
1a62A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.73 64.0 6.06e-01 95.0% 94.3%
2b39A13 2.40.50.120 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.71 62.0 4.79e-01 100.0% 64.0%
4npsA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.68 49.0 4.99e-01 93.3% 79.3%
4pqxA01 2.40.50.500 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › NigD-like N-terminal OB domain 0.68 58.0 5.54e-01 98.3% 93.2%
3go5A01 2.40.50.330 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.68 55.0 5.21e-01 95.0% 74.6%
1ixrA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.65 55.0 5.42e-01 96.7% 92.1%
1cukA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.64 53.0 5.23e-01 98.3% 90.9%
2rdgA02 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.63 53.0 5.14e-01 98.3% 91.5%
1yfbA00 2.10.260.10 Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D › 0.63 39.0 4.18e-01 73.3% 71.2%
2ej9A02 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.62 35.0 3.81e-01 96.7% 65.3%
1bvsA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.62 51.0 5.08e-01 98.3% 92.3%
4iimA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 38.0 3.96e-01 98.3% 68.4%
1x43A01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.60 40.0 4.03e-01 98.3% 67.7%
4x9cD00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.57 34.0 3.43e-01 100.0% 55.0%
7afrX02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.57 34.0 3.42e-01 100.0% 56.7%
1x9zA01 3.30.1540.20 Alpha Beta › 2-Layer Sandwich › formyl-coa transferase, domain 3 › MutL, C-terminal domain, dimerisation subdomain 0.53 43.0 3.79e-01 93.3% 83.9%
1xovA03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.53 37.0 3.59e-01 95.0% 62.5%
4lwoB02 2.70.160.11 Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 0.52 41.0 3.14e-01 98.3% 97.3%
4o2zA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.52 42.0 3.17e-01 91.7% 72.5%
6ruiB04 3.90.1110.10 Alpha Beta › Alpha-Beta Complex › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; domain 3 › RNA polymerase Rpb2, domain 2 0.51 43.0 3.14e-01 98.3% 63.2%
ECOD (42)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4150611 2.1.1.38 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_RNB 0.75 68.0 6.49e-01 100.0% 94.3%
3239333 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.75 65.0 6.55e-01 100.0% 96.7%
3215090 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.74 67.0 6.51e-01 100.0% 95.4%
3241285 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.74 67.0 4.98e-01 100.0% 44.8%
3243150 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.74 66.0 6.11e-01 100.0% 86.7%
4487060 2.1.1.38 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_RNB 0.73 67.0 6.52e-01 100.0% 95.4%
3213991 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.73 65.0 6.17e-01 100.0% 91.4%
3244273 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.73 65.0 6.18e-01 100.0% 91.4%
3587502 2.1.1.38 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_RNB 0.72 66.0 6.05e-01 100.0% 85.3%
3511418 2.1.1.38 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_RNB 0.71 65.0 6.19e-01 100.0% 87.1%
3975926 2.4.1.17 beta barrels › OB-fold › MOP-like › MOP-like › DUF7765 0.71 60.0 5.36e-01 95.0% 72.9%
3989629 2.1.1.38 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_RNB 0.70 64.0 6.08e-01 100.0% 91.4%
4291295 2.1.1.88 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CSD2 0.68 61.0 5.42e-01 100.0% 74.1%
4965868 4.1.1.13 beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.68 41.0 4.06e-01 100.0% 57.1%
4270030 2.1.1.14 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N 0.67 57.0 5.64e-01 98.3% 92.3%
4096999 2.1.1.14 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N 0.67 57.0 5.60e-01 98.3% 92.3%
4956738 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.66 59.0 5.05e-01 100.0% 65.3%
4937552 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.66 58.0 4.87e-01 100.0% 60.6%
4407567 2.1.1.14 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N 0.66 55.0 5.46e-01 98.3% 92.3%
4458321 2.1.1.14 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N 0.66 55.0 5.38e-01 96.7% 90.8%
3439924 1.1.3.0 beta barrels › cradle loop barrel › RIFT-related › AbrB 0.65 43.0 4.62e-01 71.7% 79.6%
4342936 2.1.1.83 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SfsA_N 0.65 57.0 4.78e-01 100.0% 59.0%
4390251 2.1.1.14 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N 0.65 52.0 5.25e-01 93.3% 91.7%
4069150 2.1.1.14 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N 0.65 54.0 5.32e-01 96.7% 90.8%
4322651 2.1.1.14 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N 0.65 55.0 5.43e-01 98.3% 90.8%
3487990 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.64 52.0 4.36e-01 95.0% 93.9%
4506647 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.64 54.0 5.32e-01 98.3% 92.3%
4445324 2.1.1.14 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N 0.64 51.0 5.06e-01 93.3% 92.3%
3320357 1.1.11.0 beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain 0.64 54.0 4.69e-01 98.3% 98.0%
4046191 2.1.1.14 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N 0.64 53.0 5.06e-01 98.3% 78.7%
4193853 2.1.1.14 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N 0.63 53.0 5.22e-01 98.3% 92.3%
4219215 2.1.1.14 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N 0.63 53.0 5.00e-01 98.3% 80.0%
4049278 2.1.1.14 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N 0.63 53.0 5.00e-01 98.3% 80.0%
4442866 2.1.1.14 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N 0.63 53.0 5.20e-01 98.3% 92.3%
4337382 2.1.1.14 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N 0.63 52.0 4.95e-01 98.3% 80.0%
3958012 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.63 52.0 4.67e-01 98.3% 65.6%
3825581 1.1.11.1 beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 0.62 52.0 4.43e-01 100.0% 88.1%
3596264 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.62 54.0 4.44e-01 100.0% 80.0%
4952161 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.60 51.0 4.61e-01 98.3% 81.2%
4296288 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.60 49.0 4.27e-01 100.0% 91.4%
5055355 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.60 50.0 4.52e-01 100.0% 92.2%
4948357 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.56 46.0 4.24e-01 100.0% 73.8%
D2 high residues 149-205
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF13509.13 best S1_2 23.1 8.70e-05 89.5% 78.7%
CATH (22)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1y14D02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.74 66.0 5.74e-01 100.0% 96.6%
3go5A01 2.40.50.330 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.73 61.0 5.71e-01 94.7% 74.6%
2exdA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.73 59.0 5.41e-01 100.0% 68.9%
2ja9A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.72 63.0 5.62e-01 100.0% 94.0%
2dgyA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.70 62.0 5.56e-01 100.0% 78.5%
1dgsA04 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.68 58.0 5.42e-01 100.0% 97.3%
3c12A01 2.30.30.910 Mainly Beta › Roll › SH3 type barrels. › 0.68 38.0 3.99e-01 96.5% 60.8%
2yyzA02 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.68 50.0 5.01e-01 100.0% 79.3%
1cukA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.66 54.0 5.23e-01 94.7% 90.9%
1ixrA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.66 56.0 5.42e-01 94.7% 92.1%
1bvsA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.66 54.0 5.22e-01 94.7% 90.8%
2rdgA02 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.65 54.0 5.14e-01 98.2% 88.7%
3nqiA01 2.40.50.500 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › NigD-like N-terminal OB domain 0.65 55.0 5.35e-01 100.0% 90.8%
1jt8A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.64 55.0 4.63e-01 100.0% 62.7%
1iv8A02 3.30.1590.10 Alpha Beta › 2-Layer Sandwich › Maltooligosyl trehalose synthase, domain 2 › Maltooligosyl trehalose synthase, domain 2 0.58 43.0 3.38e-01 78.9% 54.2%
1yfbA00 2.10.260.10 Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D › 0.58 36.0 3.80e-01 71.9% 69.2%
1b3qA04 2.40.50.180 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › CheA-289, Domain 4 0.57 47.0 4.63e-01 94.7% 95.2%
5cvmA00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.57 41.0 2.58e-01 100.0% 14.3%
1mvfD00 2.10.260.10 Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D › 0.57 38.0 4.19e-01 77.2% 88.6%
2zxrA01 2.40.50.460 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.57 46.0 3.53e-01 100.0% 42.4%
2p3yA01 2.20.25.10 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.52 29.0 3.26e-01 86.0% 86.7%
1g7sA02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.51 43.0 3.58e-01 100.0% 93.5%
ECOD (64)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3595342 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.76 69.0 5.29e-01 100.0% 49.6%
4948008 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.76 69.0 5.86e-01 100.0% 68.9%
3239333 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.75 66.0 6.53e-01 100.0% 95.0%
5067743 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.74 68.0 5.65e-01 100.0% 65.3%
3230022 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.74 65.0 6.11e-01 100.0% 91.4%
3243150 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.74 64.0 5.93e-01 100.0% 85.3%
5006716 2.1.1.7 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 0.74 65.0 5.71e-01 98.2% 70.6%
4942314 2.1.1.11 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-1a 0.73 66.0 5.14e-01 100.0% 50.8%
3244273 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.73 64.0 6.00e-01 100.0% 90.0%
3992357 2.1.1.11 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-1a 0.73 65.0 5.16e-01 100.0% 53.0%
2720713 2.1.1.11 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-1a 0.73 66.0 5.30e-01 100.0% 58.5%
4197835 2.1.1.73 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RsgA_N 0.73 67.0 6.37e-01 100.0% 89.2%
3241285 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.73 63.0 4.73e-01 100.0% 44.1%
3215090 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.71 62.0 6.03e-01 100.0% 93.8%
4449307 375.13.1.0 few secondary structure elements › Rubredoxin-like › Mycobacterium tuberculosis Topoisomerase I C-terminal domain › Mycobacterium tuberculosis Topoisomerase I C-terminal domain 0.69 49.0 4.88e-01 91.2% 70.0%
4475796 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.69 57.0 5.83e-01 94.7% 96.4%
4038328 2.1.1.14 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N 0.68 56.0 5.41e-01 94.7% 90.8%
4059805 2.1.1.14 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N 0.68 56.0 5.43e-01 94.7% 90.8%
4506647 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.67 56.0 5.39e-01 94.7% 90.8%
4046191 2.1.1.14 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N 0.67 55.0 5.14e-01 94.7% 78.7%
4458321 2.1.1.14 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N 0.67 56.0 5.38e-01 94.7% 90.8%
4322651 2.1.1.14 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N 0.67 58.0 5.55e-01 96.5% 90.8%
4436860 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.67 54.0 5.29e-01 94.7% 90.8%
4579024 375.13.1.1 few secondary structure elements › Rubredoxin-like › Mycobacterium tuberculosis Topoisomerase I C-terminal domain › Mycobacterium tuberculosis Topoisomerase I C-terminal domain › Toprim_C_rpt 0.67 51.0 5.09e-01 82.5% 91.4%
4973506 2.1.1.364 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF2110 0.66 58.0 5.22e-01 100.0% 88.7%
4952161 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.66 56.0 5.00e-01 100.0% 80.0%
4264254 2.1.1.14 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N 0.65 54.0 4.99e-01 94.7% 78.7%
4069150 2.1.1.14 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N 0.65 56.0 5.40e-01 96.5% 90.8%
4534526 2.1.1.14 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N 0.65 53.0 5.17e-01 94.7% 90.8%
146269 2.18.1.0 beta barrels › OB-fold › OB domain in putative lipoprotein BF3042-related proteins › OB domain in putative lipoprotein BF3042-related proteins 0.65 55.0 5.34e-01 100.0% 90.9%
4548409 375.13.1.1 few secondary structure elements › Rubredoxin-like › Mycobacterium tuberculosis Topoisomerase I C-terminal domain › Mycobacterium tuberculosis Topoisomerase I C-terminal domain › Toprim_C_rpt 0.65 46.0 4.90e-01 75.4% 96.0%
4390251 2.1.1.14 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N 0.64 52.0 5.16e-01 91.2% 91.7%
5027264 1.1.3.2 beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.64 40.0 3.72e-01 71.9% 51.4%
4992628 1.1.3.2 beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.63 39.0 4.01e-01 71.9% 65.5%
5014382 1.1.3.2 beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.63 39.0 3.55e-01 71.9% 48.0%
4967811 1.1.3.2 beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.63 39.0 3.85e-01 71.9% 60.0%
4027350 2.1.1.37 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_NTP_bind 0.62 51.0 4.64e-01 100.0% 67.5%
5038808 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.62 52.0 4.05e-01 98.2% 47.4%
5079277 1.1.3.2 beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.62 38.0 3.87e-01 71.9% 62.1%
4967881 1.1.3.2 beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.61 38.0 3.93e-01 71.9% 66.7%
5029188 1.1.3.0 beta barrels › cradle loop barrel › RIFT-related › AbrB 0.60 38.0 3.87e-01 71.9% 65.5%
5059683 1.1.3.2 beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.60 37.0 3.99e-01 71.9% 72.0%
4995271 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.60 51.0 4.12e-01 96.5% 51.8%
4467867 3784.1.1.0 a+b two layers › Putative lipoprotein CPF_1278-related › Putative lipoprotein CPF_1278-related › Putative lipoprotein CPF_1278-related 0.59 50.0 3.70e-01 93.0% 80.0%
5007113 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.59 51.0 3.97e-01 98.2% 46.9%
4949981 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.59 50.0 3.94e-01 96.5% 44.8%
3460651 2.1.1.37 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_NTP_bind 0.59 50.0 4.28e-01 100.0% 59.0%
5074248 1.1.3.0 beta barrels › cradle loop barrel › RIFT-related › AbrB 0.59 37.0 3.81e-01 71.9% 65.5%
3319919 2.1.1.37 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_NTP_bind 0.59 49.0 4.83e-01 98.2% 96.7%
3336210 1.1.11.7 beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › DUF7271 0.58 51.0 4.43e-01 100.0% 95.6%
4967714 1.1.3.2 beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.58 37.0 3.69e-01 71.9% 61.7%
5032176 1.1.3.2 beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.58 39.0 3.87e-01 71.9% 66.7%
4377808 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.58 48.0 3.75e-01 96.5% 45.9%
4966249 1.1.3.2 beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.57 36.0 3.95e-01 71.9% 80.0%
1030850 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.57 47.0 4.61e-01 96.5% 93.8%
5016329 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.57 48.0 4.53e-01 98.2% 88.6%
5020421 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.56 47.0 3.75e-01 98.2% 47.7%
3415621 708.1.1.0 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain 0.55 45.0 4.48e-01 100.0% 88.3%
3602905 304.132.1.1 a+b two layers › Alpha-beta plaits › ferredoxin-like domain in 2,3-bisphosphoglycerate-independent phosphoglycerate mutase › ferredoxin-like domain in 2,3-bisphosphoglycerate-independent phosphoglycerate mutase › PhosphMutase 0.55 38.0 2.93e-01 75.4% 90.3%
3929201 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.55 32.0 3.43e-01 84.2% 67.3%
4935901 2.1.1.382 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF28814 0.55 45.0 4.04e-01 100.0% 85.4%
4967502 1.1.3.0 beta barrels › cradle loop barrel › RIFT-related › AbrB 0.52 32.0 3.57e-01 71.9% 80.0%
4949050 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.51 38.0 3.80e-01 82.5% 81.7%
4512243 1.1.3.2 beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.51 35.0 3.45e-01 71.9% 70.0%
D3 high residues 239-341
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF10087.15 best DUF2325 38.2 1.70e-09 87.4% 94.7%
CATH (97)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2q5cA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.81 69.0 7.10e-01 97.1% 95.9%
5x5jA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.80 69.0 6.57e-01 92.2% 96.6%
2rjnA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.79 73.0 6.58e-01 100.0% 94.1%
3kcnB00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.78 72.0 6.53e-01 100.0% 92.7%
3crnA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.78 72.0 6.68e-01 100.0% 94.6%
2gfqA02 3.40.50.10700 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › AF0625-like 0.78 56.0 6.06e-01 74.8% 96.6%
1a2oA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.78 69.0 6.27e-01 95.1% 97.0%
7lzaA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.78 69.0 6.56e-01 95.1% 99.2%
3fxaA00 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.78 64.0 5.14e-01 87.4% 67.0%
3cfyA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.78 71.0 6.58e-01 100.0% 96.9%
3lteD00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.78 66.0 6.22e-01 91.3% 95.1%
2v0nA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.78 71.0 6.28e-01 100.0% 86.3%
3h5iA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.78 71.0 6.64e-01 100.0% 99.2%
1i1qB00 3.40.50.880 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain 0.77 68.0 5.53e-01 95.1% 99.5%
3hv2A00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.77 71.0 6.42e-01 100.0% 92.6%
6zxbA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.77 70.0 6.51e-01 100.0% 98.5%
2wb4B01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.77 71.0 5.10e-01 100.0% 45.1%
3rqiA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.77 66.0 6.14e-01 92.2% 89.0%
2rdmA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.77 69.0 6.48e-01 98.1% 96.0%
3a0uA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.77 66.0 6.41e-01 93.2% 98.3%
5uqiA00 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.76 63.0 5.08e-01 87.4% 68.1%
3t6kA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.76 67.0 6.35e-01 95.1% 97.5%
2vycA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.76 69.0 6.27e-01 100.0% 99.3%
4nicA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.76 67.0 6.43e-01 95.1% 99.1%
3etnB00 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.76 62.0 4.96e-01 87.4% 65.7%
2qzjA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.76 68.0 6.44e-01 98.1% 98.3%
2b4aA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.76 66.0 6.33e-01 94.2% 97.4%
3hdvB00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.76 66.0 6.14e-01 94.2% 93.7%
3lufB02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.75 68.0 6.36e-01 99.0% 98.4%
2mswA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.75 69.0 6.46e-01 100.0% 95.2%
3b2nA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.75 65.0 6.23e-01 94.2% 98.3%
3i42A00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.75 65.0 6.24e-01 94.2% 97.5%
4eukA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.75 65.0 5.89e-01 94.2% 97.8%
3f6cA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.75 66.0 6.08e-01 96.1% 89.9%
4dadA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.74 66.0 6.16e-01 98.1% 96.1%
3luaA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.74 64.0 6.04e-01 94.2% 97.6%
3vhrA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.74 63.0 4.87e-01 92.2% 71.7%
1dz3A00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.74 56.0 5.32e-01 80.6% 86.2%
1dcfA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.74 65.0 5.96e-01 96.1% 91.0%
1wcwA01 3.40.50.10090 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.74 67.0 6.26e-01 98.1% 97.6%
3knzA02 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.73 62.0 5.46e-01 90.3% 79.5%
2q9uA02 3.40.50.360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain 0.73 63.0 5.58e-01 93.2% 100.0%
7kdyB01 3.40.50.280 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cobalamin-binding domain 0.73 62.0 5.42e-01 92.2% 87.5%
4pg4A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.73 65.0 5.59e-01 98.1% 93.8%
1wl8A00 3.40.50.880 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain 0.73 65.0 5.27e-01 97.1% 99.5%
3re1A01 3.40.50.10090 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.73 66.0 6.28e-01 100.0% 97.5%
1s8nA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.73 66.0 6.06e-01 100.0% 95.5%
2z1dA01 3.40.50.11750 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HypD, alpha/beta domain 1 0.73 64.0 5.76e-01 97.1% 70.2%
1l9xA00 3.40.50.880 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain 0.72 64.0 4.61e-01 97.1% 86.1%
1dxyA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.72 64.0 5.86e-01 96.1% 93.2%
1j4aD01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.72 63.0 5.78e-01 95.1% 91.9%
3clkB01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.72 64.0 6.09e-01 97.1% 91.8%
1yqeA02 3.40.50.10700 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › AF0625-like 0.72 59.0 6.09e-01 87.4% 94.8%
3lufB01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.72 63.0 6.05e-01 97.1% 98.3%
2kpoA00 3.40.50.11230 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.71 62.0 6.09e-01 95.1% 91.8%
1b6sA01 3.40.50.20 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.71 46.0 5.38e-01 72.8% 97.1%
1mdbA01 3.40.50.980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.71 57.0 4.96e-01 86.4% 60.1%
3b7wA01 3.40.50.12780 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain 0.71 56.0 3.64e-01 83.5% 22.1%
6abiA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.71 60.0 5.51e-01 92.2% 90.4%
4cujA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.71 61.0 5.64e-01 95.1% 92.5%
1xdwA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.71 62.0 5.67e-01 95.1% 94.0%
7kx9A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.70 59.0 5.28e-01 92.2% 81.2%
1sc6A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.70 59.0 5.43e-01 92.2% 91.0%
2bfwA01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.70 62.0 5.13e-01 100.0% 80.4%
2yfkA01 3.40.50.1370 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase 0.69 59.0 4.81e-01 92.2% 58.7%
5im4F00 3.40.50.510 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphotransferase system, mannose-type IIA component 0.69 60.0 5.55e-01 95.1% 84.0%
6biiA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.69 59.0 5.37e-01 94.2% 98.6%
3tovA02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.69 61.0 4.96e-01 96.1% 87.6%
4njmA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.69 62.0 5.65e-01 99.0% 97.8%
5tx7A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.68 58.0 5.34e-01 92.2% 91.0%
2gcgA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.68 57.0 5.27e-01 92.2% 91.9%
2lndA00 3.40.50.11230 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.68 60.0 5.91e-01 99.0% 94.6%
2yhaA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.68 60.0 5.48e-01 99.0% 89.2%
3db2A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.68 60.0 5.39e-01 96.1% 95.0%
1zghA01 3.40.50.170 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Formyl transferase, N-terminal domain 0.68 59.0 5.03e-01 95.1% 90.9%
3lftB02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.67 60.0 5.29e-01 96.1% 78.9%
2lpmA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.67 58.0 5.47e-01 95.1% 92.7%
2l69A00 3.40.50.11230 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.67 59.0 5.44e-01 98.1% 97.0%
3fhlA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.66 58.0 5.23e-01 95.1% 94.9%
2eklA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.66 56.0 5.31e-01 94.2% 95.0%
3imkA00 3.40.50.450 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.65 57.0 4.95e-01 95.1% 75.9%
2fokA03 3.40.91.30 Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › 0.64 51.0 4.35e-01 87.4% 92.0%
2py6A02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.63 51.0 4.85e-01 87.4% 81.7%
1z9bA01 3.40.50.10050 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Translation initiation factor IF- 2, domain 3 0.62 44.0 4.76e-01 74.8% 96.4%
5l3qA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.62 49.0 3.98e-01 87.4% 88.8%
3nd5A00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.61 45.0 3.97e-01 77.7% 74.3%
4do7A00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.60 48.0 3.55e-01 87.4% 93.0%
3a06B01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.59 50.0 4.52e-01 93.2% 95.0%
4i6kA00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.59 46.0 3.51e-01 86.4% 91.8%
1yt8A02 3.40.250.10 Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain 0.58 45.0 4.45e-01 85.4% 79.6%
3nhvC01 3.40.250.10 Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain 0.58 44.0 4.26e-01 83.5% 70.8%
7d73E01 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.58 49.0 3.90e-01 94.2% 46.1%
4r75A01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.57 46.0 4.05e-01 89.3% 80.4%
3ktsA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.57 41.0 3.45e-01 76.7% 95.1%
7zllA01 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.56 46.0 3.40e-01 89.3% 36.1%
4qysA02 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.54 40.0 4.08e-01 90.3% 79.8%
3ve9A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.51 44.0 3.61e-01 98.1% 99.5%
ECOD (99)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4969233 2007.1.3.73 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › DUF2325 0.92 81.0 8.27e-01 91.3% 96.0%
4936294 2007.1.3.73 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › DUF2325 0.88 82.0 8.05e-01 98.1% 93.6%
4681655 4978.1.1.2 a/b three-layered sandwiches › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › DUF2325 0.87 76.0 7.92e-01 91.3% 98.9%
4637998 2007.2.2.7 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Phosphotyrosine protein phosphatases I-like › DUF2325 0.85 72.0 7.54e-01 89.3% 97.9%
4209208 2007.1.2.17 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › DUF2325 0.85 72.0 7.51e-01 89.3% 97.9%
4615208 2007.2.2.7 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Phosphotyrosine protein phosphatases I-like › DUF2325 0.85 76.0 7.76e-01 94.2% 99.0%
4273752 4978.1.1.1 a/b three-layered sandwiches › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › tRNA_deacylase 0.80 57.0 6.15e-01 73.8% 97.8%
4930497 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.79 72.0 6.72e-01 98.1% 98.4%
3599558 2007.1.3.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like 0.78 72.0 6.64e-01 100.0% 89.2%
3967374 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.78 72.0 6.14e-01 100.0% 81.2%
3059315 2003.1.1.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.78 66.0 5.97e-01 91.3% 92.1%
3388140 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.78 72.0 6.59e-01 100.0% 92.3%
10041 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.78 72.0 6.22e-01 100.0% 79.7%
1867152 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.77 66.0 6.31e-01 91.3% 95.8%
4360328 323.1.1.0 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases 0.77 59.0 4.82e-01 80.6% 45.4%
165927 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.77 68.0 6.47e-01 96.1% 97.5%
4338611 2003.1.8.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › MurCD/PglD N-terminal domain-like 0.77 54.0 6.20e-01 80.6% 98.7%
3659669 2006.1.6.12 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 0.77 67.0 5.12e-01 95.1% 86.8%
4110991 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.77 71.0 6.64e-01 100.0% 98.4%
3965997 2007.1.3.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like 0.77 71.0 6.60e-01 100.0% 98.4%
3969418 2007.1.3.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like 0.77 70.0 6.50e-01 100.0% 94.6%
4571924 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.77 70.0 6.14e-01 99.0% 87.3%
5057081 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.77 68.0 6.15e-01 97.1% 90.7%
4517287 2007.1.1.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › GATase 0.77 68.0 5.33e-01 97.1% 91.2%
4400567 2007.1.1.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › GATase 0.76 70.0 5.57e-01 100.0% 97.5%
4586630 2007.1.4.3 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Phosphofructokinase N-terminal domain › NAD_kinase 0.76 68.0 6.53e-01 95.1% 94.8%
3434103 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.76 65.0 6.19e-01 92.2% 96.7%
3505104 2007.1.3.5 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › OKR_DC_1_N 0.76 69.0 6.21e-01 100.0% 98.6%
4939542 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.76 66.0 6.19e-01 94.2% 96.8%
4094395 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.76 67.0 6.01e-01 96.1% 85.7%
3386866 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.75 64.0 6.21e-01 91.3% 97.4%
3391287 2007.1.1.11 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › Peptidase_C26 0.75 67.0 4.69e-01 97.1% 85.6%
3267224 2007.1.1.11 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › Peptidase_C26 0.75 67.0 4.76e-01 97.1% 83.7%
3941477 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.75 66.0 6.11e-01 96.1% 90.0%
3968493 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.75 65.0 6.10e-01 94.2% 90.4%
3948714 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.75 66.0 6.01e-01 96.1% 88.1%
3176483 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.75 68.0 6.19e-01 100.0% 90.4%
3879317 2003.1.1.79 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › ISPD_C 0.75 64.0 5.53e-01 93.2% 92.5%
3513107 2007.1.1.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › GATase 0.74 66.0 4.71e-01 97.1% 83.6%
3972859 2007.1.3.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like 0.74 67.0 6.22e-01 99.0% 91.5%
3289187 2007.1.3.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like 0.74 65.0 5.88e-01 96.1% 83.6%
3595322 2003.1.9.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins 0.74 65.0 4.72e-01 95.1% 81.9%
5059458 2006.1.2.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › DHH phosphoesterases › DHH 0.73 58.0 4.32e-01 84.5% 47.8%
4941738 7597.1.1.0 a/b three-layered sandwiches › Endolysin C-terminal domain › Endolysin C-terminal domain › Endolysin C-terminal domain 0.73 59.0 5.42e-01 87.4% 70.4%
4941966 2003.1.10.23 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain › LysX_preATP_grasp 0.73 51.0 5.76e-01 72.8% 96.2%
3970353 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.73 66.0 6.16e-01 99.0% 97.6%
3962432 323.1.1.0 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases 0.73 52.0 4.54e-01 80.6% 50.7%
5055518 2003.1.1.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.73 53.0 5.23e-01 76.7% 72.7%
3962063 323.1.1.3 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.72 53.0 5.56e-01 87.4% 83.2%
4983660 7597.1.1.0 a/b three-layered sandwiches › Endolysin C-terminal domain › Endolysin C-terminal domain › Endolysin C-terminal domain 0.72 58.0 5.93e-01 87.4% 96.0%
4874996 2003.1.1.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.72 52.0 5.82e-01 84.5% 98.7%
4978721 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.72 50.0 4.89e-01 72.8% 98.3%
4771626 2007.1.3.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like 0.71 62.0 6.09e-01 95.1% 91.8%
3720345 323.1.1.0 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases 0.71 54.0 4.42e-01 80.6% 45.3%
3235584 7590.1.1.2 a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Piwi 0.71 62.0 5.28e-01 96.1% 77.0%
3801701 323.1.1.0 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases 0.71 58.0 4.62e-01 89.3% 44.3%
3720713 323.1.1.0 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases 0.71 57.0 4.76e-01 86.4% 53.7%
3223797 7590.1.1.2 a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Piwi 0.71 61.0 5.25e-01 96.1% 77.0%
4506940 323.1.1.3 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.70 57.0 4.61e-01 86.4% 63.7%
3200548 323.1.1.3 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.70 58.0 4.55e-01 87.4% 50.2%
3278604 323.1.1.3 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.70 57.0 4.64e-01 87.4% 49.5%
4092708 323.1.1.3 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.70 51.0 4.28e-01 83.5% 45.1%
3727479 323.1.1.3 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.70 57.0 4.63e-01 87.4% 53.2%
4060734 4978.1.1.1 a/b three-layered sandwiches › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › tRNA_deacylase 0.70 55.0 5.85e-01 86.4% 96.7%
5027612 7592.1.1.0 a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains 0.69 53.0 5.16e-01 81.6% 99.1%
4992407 7597.1.1.0 a/b three-layered sandwiches › Endolysin C-terminal domain › Endolysin C-terminal domain › Endolysin C-terminal domain 0.69 55.0 4.67e-01 86.4% 54.3%
3282865 323.1.1.3 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.69 56.0 4.47e-01 87.4% 48.8%
3174574 2003.1.11.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Formate/glycerate dehydrogenase catalytic domain-like › 2-Hacid_dh 0.69 58.0 5.04e-01 92.2% 75.6%
2029628 7597.1.1.1 a/b three-layered sandwiches › Endolysin C-terminal domain › Endolysin C-terminal domain › Endolysin C-terminal domain › CW_binding_2 0.69 55.0 5.70e-01 87.4% 98.0%
3595467 2003.1.11.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Formate/glycerate dehydrogenase catalytic domain-like 0.69 58.0 5.40e-01 92.2% 90.8%
3622925 7590.1.1.2 a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Piwi 0.69 58.0 4.81e-01 95.1% 66.3%
4277518 7563.1.1.4 a/b three-layered sandwiches › MCP/YpsA-related › MCP/YpsA-related › MCP/YpsA-related › YpsA 0.68 53.0 4.30e-01 80.6% 92.3%
5043228 7597.1.1.1 a/b three-layered sandwiches › Endolysin C-terminal domain › Endolysin C-terminal domain › Endolysin C-terminal domain › CW_binding_2 0.68 55.0 5.59e-01 87.4% 98.0%
5064938 2003.1.11.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Formate/glycerate dehydrogenase catalytic domain-like › 2-Hacid_dh 0.68 60.0 5.62e-01 96.1% 90.4%
4941072 2006.1.6.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.68 60.0 4.73e-01 99.0% 95.5%
4606868 323.1.1.3 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.68 51.0 4.48e-01 87.4% 52.9%
5068766 7592.1.1.3 a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › DUF6293_N 0.68 50.0 4.39e-01 77.7% 76.8%
3285018 323.1.1.3 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.68 55.0 5.27e-01 87.4% 88.3%
2391064 323.1.1.3 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.68 56.0 4.66e-01 88.3% 54.3%
3611837 7590.1.1.0 a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs 0.68 58.0 5.12e-01 96.1% 71.0%
4500471 4978.1.1.1 a/b three-layered sandwiches › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › tRNA_deacylase 0.67 61.0 5.78e-01 99.0% 85.8%
4186633 7512.1.1.9 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › LpxB 0.67 60.0 4.75e-01 99.0% 76.2%
4023806 2006.1.3.6 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_2 0.67 56.0 5.02e-01 92.2% 89.7%
3958629 323.1.1.3 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.66 53.0 5.46e-01 86.4% 94.0%
3192362 7512.1.1.27 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › O-FucT 0.66 46.0 3.51e-01 70.9% 60.0%
2061412 7524.1.1.5 a/b three-layered sandwiches › ALDH-like › ALDH-like › ALDH-like › Aldedh, LuxC 0.66 57.0 4.49e-01 96.1% 99.1%
119404 7563.1.1.5 a/b three-layered sandwiches › MCP/YpsA-related › MCP/YpsA-related › MCP/YpsA-related › cpYpsA 0.65 57.0 4.95e-01 95.1% 75.9%
4153559 2007.1.3.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like 0.65 56.0 5.33e-01 94.2% 97.5%
5059170 2004.1.1.29 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.65 56.0 4.54e-01 92.2% 66.3%
4939229 2006.1.6.45 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › PF30231 0.64 56.0 4.59e-01 98.1% 91.0%
3825798 323.1.1.3 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.64 52.0 5.18e-01 87.4% 84.8%
3380848 2003.1.11.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Formate/glycerate dehydrogenase catalytic domain-like › 2-Hacid_dh 0.64 55.0 5.04e-01 96.1% 85.2%
5042635 7597.1.1.0 a/b three-layered sandwiches › Endolysin C-terminal domain › Endolysin C-terminal domain › Endolysin C-terminal domain 0.64 51.0 5.25e-01 87.4% 93.7%
5027051 2006.1.3.6 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_2 0.63 50.0 4.65e-01 86.4% 85.9%
1397696 2003.1.11.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Formate/glycerate dehydrogenase catalytic domain-like › 2-Hacid_dh 0.63 53.0 5.20e-01 92.2% 84.5%
4947029 2007.1.3.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like 0.62 55.0 4.90e-01 99.0% 86.7%
4241471 7592.1.1.6 a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › Csa3_N 0.60 53.0 4.95e-01 96.1% 96.8%
3258547 2484.1.1.48 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_II 0.60 49.0 4.19e-01 90.3% 78.2%
1178646 2003.1.14.2 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Aspartate/ornithine carbamoyltransferase › OTCace_N 0.60 45.0 3.87e-01 80.6% 57.5%