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gwe1_scaffold_7_prodigal-single.1__X__X__00089
Bact-Virgwe1_scaffold_7_prodigal-single.1__X__X__00089
Identity
- Kingdom:
- phage
Quality
51.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-81
D2
medium
residues 215-275_801-818
D3
medium
residues 322-358_996-1033
D4
medium
residues 871-959
Domain cluster:
rep: NC_014661.1__YP_004009850.1__Acj61p233__00233__D615-699
D5
medium
residues 1164-1231
Domain cluster:
representative
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2o5nA02 | 3.30.500.30 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › | 0.68 | 50.0 | 3.79e-01 | 77.9% | 75.8% |
| 4g59C02 | 3.30.500.30 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › | 0.65 | 48.0 | 3.61e-01 | 77.9% | 75.3% |
| 4qq1C03 | 2.40.128.240 | Mainly Beta › Beta Barrel › Lipocalin › | 0.63 | 38.0 | 3.49e-01 | 70.6% | 46.6% |
| 1k1yB02 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.58 | 50.0 | 3.46e-01 | 100.0% | 85.7% |
| 4fr9A00 | 3.10.450.360 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 49.0 | 3.97e-01 | 98.5% | 73.0% |
| 2rk0A01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.58 | 39.0 | 3.28e-01 | 70.6% | 76.9% |
| 1j0wB00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.57 | 40.0 | 3.52e-01 | 73.5% | 66.0% |
| 1iwmA00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.57 | 39.0 | 2.91e-01 | 72.1% | 29.4% |
| 2xe4A02 | 2.130.10.120 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain | 0.56 | 47.0 | 3.10e-01 | 100.0% | 35.2% |
| 1p32B00 | 3.10.280.10 | Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein | 0.56 | 45.0 | 3.46e-01 | 91.2% | 47.4% |
| 2ogqA01 | 3.30.1120.30 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain | 0.56 | 44.0 | 3.57e-01 | 83.8% | 50.8% |
| 4gp0B02 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.56 | 40.0 | 3.41e-01 | 79.4% | 87.8% |
| 4bv4R00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.56 | 48.0 | 2.96e-01 | 100.0% | 24.8% |
| 1olzA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.55 | 47.0 | 2.88e-01 | 98.5% | 50.9% |
| 1wguA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.55 | 40.0 | 3.37e-01 | 76.5% | 80.9% |
| 4arnA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.55 | 47.0 | 3.21e-01 | 100.0% | 39.7% |
| 3k25A00 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.54 | 42.0 | 2.80e-01 | 85.3% | 85.8% |
| 1wfiA00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 38.0 | 3.14e-01 | 75.0% | 61.1% |
| 3mh9A00 | 2.50.20.20 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › | 0.53 | 43.0 | 3.07e-01 | 89.7% | 36.6% |
| 5f7uA02 | 2.60.40.1760 | Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) | 0.53 | 43.0 | 3.13e-01 | 95.6% | 61.1% |
| 3gkeA01 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.53 | 39.0 | 3.14e-01 | 77.9% | 79.2% |
| 4wj7D00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 38.0 | 3.13e-01 | 76.5% | 80.5% |
| 4ba0A01 | 2.60.40.1760 | Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) | 0.52 | 42.0 | 3.13e-01 | 94.1% | 58.3% |
| 1upsA02 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.51 | 39.0 | 3.27e-01 | 85.3% | 87.2% |
| 4qrlA00 | 2.40.128.280 | Mainly Beta › Beta Barrel › Lipocalin › | 0.51 | 39.0 | 3.41e-01 | 85.3% | 70.0% |
| 2bklA02 | 2.130.10.120 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain | 0.50 | 40.0 | 2.74e-01 | 100.0% | 43.2% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4937333 | 79.1.1.0 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain | 0.71 | 59.0 | 5.64e-01 | 92.6% | 88.7% |
| 3428265 | 5.3.1.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II | 0.66 | 51.0 | 4.05e-01 | 82.4% | 88.9% |
| 3635423 | 844.1.1.0 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain | 0.64 | 48.0 | 3.55e-01 | 82.4% | 63.8% |
| 5046458 | 844.1.1.2 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › LOR | 0.62 | 53.0 | 3.99e-01 | 98.5% | 48.0% |
| 2559738 | 79.1.1.9 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Gp34_trimer | 0.61 | 54.0 | 3.41e-01 | 100.0% | 31.3% |
| 3630302 | 220.1.1.22 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C | 0.60 | 43.0 | 3.64e-01 | 75.0% | 59.1% |
| 3991186 | 220.1.1.22 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C | 0.60 | 42.0 | 3.56e-01 | 75.0% | 57.4% |
| 4145322 | 5.1.4.6 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,ANAPC4_WD40 | 0.59 | 42.0 | 2.59e-01 | 73.5% | 24.4% |
| 3861029 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.59 | 43.0 | 2.70e-01 | 76.5% | 22.4% |
| 3650598 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.59 | 43.0 | 3.05e-01 | 80.9% | 90.8% |
| 4428765 | 12.3.1.15 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › AmyA-gluTrfs_C | 0.59 | 52.0 | 3.41e-01 | 100.0% | 86.8% |
| 4371211 | 3321.1.1.1 ↗ | a+b two layers › Meander beta sheet domain in fatty acid synthase subunit beta › Meander beta sheet domain in fatty acid synthase subunit beta › Meander beta sheet domain in fatty acid synthase subunit beta › FAS_meander | 0.58 | 51.0 | 3.73e-01 | 95.6% | 84.6% |
| 3981884 | 12.3.1.27 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › DUF5107 | 0.58 | 47.0 | 2.99e-01 | 91.2% | 83.5% |
| 5052250 | 12.3.1.15 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › AmyA-gluTrfs_C | 0.57 | 50.0 | 3.31e-01 | 100.0% | 90.7% |
| 3409369 | 207.1.1.141 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_5, LRR_8 | 0.56 | 49.0 | 3.24e-01 | 100.0% | 36.1% |
| 3648923 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.54 | 48.0 | 3.40e-01 | 100.0% | 75.2% |
| 3621570 | 5.1.4.62 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PROPPIN | 0.54 | 43.0 | 2.83e-01 | 95.6% | 52.2% |
| 3933159 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.54 | 44.0 | 2.99e-01 | 100.0% | 50.8% |
| 3264319 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.53 | 42.0 | 2.61e-01 | 86.8% | 39.3% |
| 3190113 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.53 | 43.0 | 2.91e-01 | 95.6% | 67.9% |
| 3538633 | 5.1.12.3 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › PERK and Ire1 luminal domains › WD40 | 0.53 | 43.0 | 2.79e-01 | 95.6% | 46.0% |
| 3278653 | 6.1.1.19 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › RicinB_lectin_2 | 0.52 | 42.0 | 3.42e-01 | 95.6% | 85.1% |
| 3792452 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.51 | 41.0 | 2.80e-01 | 97.1% | 51.7% |
| 3500438 | 5.1.4.277 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_EIPR1 | 0.51 | 41.0 | 2.95e-01 | 95.6% | 78.2% |
| 3520837 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.51 | 36.0 | 2.95e-01 | 76.5% | 53.3% |