←Back to structures
gwe1_scaffold_7_prodigal-single.1__X__X__00173
Bact-Virgwe1_scaffold_7_prodigal-single.1__X__X__00173
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-59
Domain cluster:
rep: OM634661.1__UNY40051.1__KLEB273_gp103__00103__D9-66
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5hkxA04 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.78 | 53.0 | 5.95e-01 | 98.3% | 93.2% |
| 2bayE00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.70 | 49.0 | 4.90e-01 | 100.0% | 72.9% |
| 2cklB01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.69 | 49.0 | 4.66e-01 | 100.0% | 63.4% |
| 5trbA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.66 | 48.0 | 4.58e-01 | 100.0% | 65.2% |
| 2idaA01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.63 | 40.0 | 3.52e-01 | 100.0% | 43.2% |
| 2zt5A02 | 3.30.40.230 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › | 0.62 | 52.0 | 4.73e-01 | 100.0% | 91.7% |
| 6nw1A00 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.62 | 44.0 | 4.70e-01 | 98.3% | 97.8% |
| 1vd4A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.61 | 42.0 | 4.22e-01 | 100.0% | 71.0% |
| 2yu4A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.60 | 50.0 | 4.30e-01 | 100.0% | 58.5% |
| 3m7nA03 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.60 | 34.0 | 3.86e-01 | 89.7% | 88.2% |
| 2k5cA00 | 3.10.20.830 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Bifunctional heparan sulphate n-deacetylase/n-sulphotransferase | 0.60 | 51.0 | 4.48e-01 | 98.3% | 75.0% |
| 3mhsA01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.57 | 40.0 | 3.15e-01 | 74.1% | 39.4% |
| 2nutB02 | 2.30.30.380 | Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 | 0.56 | 44.0 | 4.32e-01 | 100.0% | 79.0% |
| 3fjuB00 | 3.30.40.170 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › | 0.55 | 41.0 | 4.00e-01 | 79.3% | 75.4% |
| 5tipA02 | 2.70.9.20 | Mainly Beta › Distorted Sandwich › Adenovirus Type 2 Hexon; domain 4 › Major capsid protein Vp54 | 0.55 | 47.0 | 3.25e-01 | 100.0% | 32.6% |
| 4e2tB00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.55 | 49.0 | 3.51e-01 | 100.0% | 94.7% |
| 1sr9B03 | 1.10.1220.20 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › | 0.54 | 34.0 | 3.80e-01 | 77.6% | 80.4% |
| 2ky9A01 | 2.30.30.1130 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 45.0 | 4.38e-01 | 100.0% | 83.6% |
| 4q1vA01 | 2.140.10.30 | Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain | 0.52 | 42.0 | 2.53e-01 | 91.4% | 19.4% |
| 1a5kC02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.52 | 37.0 | 2.34e-01 | 79.3% | 96.6% |
| 1awoA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.51 | 42.0 | 4.26e-01 | 100.0% | 100.0% |
| 3vkgA08 | 1.10.472.130 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Dynein motor, AAA2 domain, small subdomain | 0.50 | 35.0 | 2.60e-01 | 74.1% | 66.9% |
ECOD (59)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4959767 | 375.1.3.3 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 › DUF5817 | 0.82 | 53.0 | 5.29e-01 | 100.0% | 65.0% |
| 3622302 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.79 | 59.0 | 5.45e-01 | 100.0% | 62.7% |
| 3737810 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.79 | 60.0 | 5.70e-01 | 100.0% | 69.6% |
| 4947644 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.78 | 55.0 | 5.48e-01 | 100.0% | 71.7% |
| 5045922 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.78 | 48.0 | 5.56e-01 | 87.9% | 90.0% |
| 3200985 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.78 | 59.0 | 5.03e-01 | 98.3% | 50.5% |
| 4026444 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.78 | 56.0 | 5.07e-01 | 100.0% | 56.2% |
| 4963432 | 4076.2.1.7 ↗ | a+b two layers › L9 N-domain-like › MbtH-like › MbtH-like › DUF5817 | 0.77 | 52.0 | 4.60e-01 | 100.0% | 48.2% |
| 4001708 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.76 | 54.0 | 5.11e-01 | 100.0% | 63.2% |
| 5031238 | 375.1.1.329 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TackOD1 | 0.75 | 53.0 | 5.86e-01 | 100.0% | 97.8% |
| 4991529 | 375.1.3.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 | 0.74 | 48.0 | 4.80e-01 | 100.0% | 65.0% |
| 3207082 | 376.1.4.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Ariadne-1 protein homolog › IBR | 0.73 | 51.0 | 5.29e-01 | 94.8% | 78.2% |
| 4969798 | 375.1.3.3 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 › DUF5817 | 0.72 | 47.0 | 4.81e-01 | 100.0% | 70.9% |
| 4978375 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.72 | 54.0 | 5.74e-01 | 89.7% | 98.0% |
| 3993294 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.71 | 61.0 | 5.61e-01 | 100.0% | 75.6% |
| 3782920 | 376.1.1.43 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › PRT6_C | 0.71 | 42.0 | 3.19e-01 | 100.0% | 25.9% |
| 3932949 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.70 | 51.0 | 4.68e-01 | 100.0% | 57.5% |
| 3551057 | 376.1.1.29 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_4 | 0.69 | 54.0 | 4.86e-01 | 100.0% | 61.3% |
| 3223788 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.69 | 52.0 | 4.10e-01 | 100.0% | 38.4% |
| 3752884 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.69 | 48.0 | 4.20e-01 | 100.0% | 47.8% |
| 3225707 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.68 | 54.0 | 5.15e-01 | 100.0% | 72.9% |
| 4981108 | 375.1.1.331 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF5817 | 0.68 | 44.0 | 4.81e-01 | 100.0% | 86.7% |
| 3177365 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.68 | 49.0 | 4.94e-01 | 96.6% | 76.7% |
| 3532210 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.68 | 47.0 | 4.05e-01 | 100.0% | 45.3% |
| 3881967 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.68 | 53.0 | 4.79e-01 | 100.0% | 62.5% |
| 3869437 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.68 | 47.0 | 4.69e-01 | 100.0% | 71.7% |
| 3354588 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.67 | 52.0 | 5.18e-01 | 94.8% | 80.0% |
| 3465479 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.67 | 45.0 | 2.98e-01 | 98.3% | 15.8% |
| 4956096 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.67 | 58.0 | 5.52e-01 | 100.0% | 92.9% |
| 5052386 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.67 | 44.0 | 4.99e-01 | 96.6% | 97.5% |
| None | — | 0.67 | 47.0 | 3.33e-01 | 100.0% | 23.8% | |
| 4379431 | 376.1.6.12 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain › Tmemb_55A | 0.66 | 41.0 | 3.84e-01 | 91.4% | 48.0% |
| 4004118 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.66 | 47.0 | 3.30e-01 | 100.0% | 23.8% |
| 3781280 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.65 | 54.0 | 5.12e-01 | 100.0% | 78.6% |
| 4143708 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.65 | 55.0 | 5.48e-01 | 100.0% | 95.0% |
| 3627228 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.65 | 45.0 | 4.78e-01 | 100.0% | 86.0% |
| 4000760 | 2003.1.4.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › DHS-like NAD/FAD-binding domain › SIR2 | 0.63 | 49.0 | 3.21e-01 | 98.3% | 18.9% |
| 3623557 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.63 | 56.0 | 5.07e-01 | 100.0% | 76.9% |
| 4037483 | 375.1.1.180 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › GlyRS_ins_1 | 0.62 | 53.0 | 5.06e-01 | 100.0% | 91.4% |
| 3891185 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.61 | 38.0 | 3.85e-01 | 100.0% | 61.7% |
| 4648509 | 376.1.1.37 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › SLX1_C | 0.61 | 50.0 | 4.50e-01 | 98.3% | 67.8% |
| 4986348 | 314.1.1.0 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases | 0.61 | 52.0 | 3.60e-01 | 100.0% | 27.8% |
| 3626325 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.61 | 52.0 | 4.32e-01 | 98.3% | 66.7% |
| 4195048 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.60 | 45.0 | 4.48e-01 | 96.6% | 80.0% |
| 3601696 | 375.1.1.18 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › SIR2 | 0.60 | 52.0 | 4.35e-01 | 98.3% | 73.0% |
| 3860225 | 2003.1.4.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › DHS-like NAD/FAD-binding domain › SIR2 | 0.58 | 49.0 | 3.21e-01 | 98.3% | 23.1% |
| 3958291 | 2003.1.4.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › DHS-like NAD/FAD-binding domain | 0.58 | 49.0 | 3.21e-01 | 98.3% | 25.5% |
| 2800346 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.57 | 36.0 | 3.89e-01 | 93.1% | 83.7% |
| 3751810 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.57 | 50.0 | 3.92e-01 | 100.0% | 56.0% |
| 3197487 | 376.1.1.103 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_Vps41 | 0.57 | 44.0 | 4.63e-01 | 91.4% | 100.0% |
| 3245932 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.56 | 38.0 | 4.25e-01 | 96.6% | 93.3% |
| 3891467 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.56 | 47.0 | 4.56e-01 | 96.6% | 100.0% |
| 3168651 | 375.1.1.19 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD | 0.56 | 38.0 | 3.98e-01 | 100.0% | 84.0% |
| 2595997 | 375.1.1.19 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD | 0.55 | 38.0 | 3.57e-01 | 100.0% | 57.5% |
| 3698302 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.53 | 36.0 | 3.68e-01 | 100.0% | 74.5% |
| 4030505 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 46.0 | 4.17e-01 | 98.3% | 92.5% |
| 4268554 | 375.1.1.1 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › tRNA-synt_1 | 0.53 | 46.0 | 4.17e-01 | 100.0% | 77.5% |
| 4351010 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 0.52 | 45.0 | 2.74e-01 | 100.0% | 15.5% |
| 4996022 | 3006.1.1.1 ↗ | a+b two layers › Sm-Like archaeal protein Smap3, C-terminal domain › Sm-Like archaeal protein Smap3, C-terminal domain › Sm-Like archaeal protein Smap3, C-terminal domain › Lsm_C | 0.51 | 37.0 | 3.58e-01 | 77.6% | 92.3% |