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gwe1_scaffold_7_prodigal-single.1__X__X__00243
Bact-Virgwe1_scaffold_7_prodigal-single.1__X__X__00243
Identity
- Kingdom:
- phage
Quality
82.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 30-124
Domain cluster:
rep: rifoxyb1_full_scaffold_4_prodigal-single.1__X__X__00008__D11-120
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4i8oA01 | 3.30.310.240 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Bacterial toxin RNase RnlA/LsoA, N-terminal domain | 0.61 | 44.0 | 4.54e-01 | 96.8% | 82.0% |
| 2ehbD00 | 3.30.310.80 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 | 0.60 | 43.0 | 3.95e-01 | 97.9% | 56.3% |
| 2arhA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.57 | 46.0 | 3.96e-01 | 100.0% | 53.8% |
| 3eo4D00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.57 | 49.0 | 4.19e-01 | 98.9% | 71.6% |
| 1fy7A02 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.54 | 48.0 | 4.29e-01 | 98.9% | 94.0% |
| 3df7A02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.53 | 36.0 | 3.16e-01 | 100.0% | 47.4% |
| 1xf8A02 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.52 | 46.0 | 3.87e-01 | 100.0% | 74.5% |
| 5c94A00 | 2.40.10.250 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Replicase NSP9 | 0.52 | 44.0 | 4.17e-01 | 94.7% | 96.6% |
| 1p32B00 | 3.10.280.10 | Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein | 0.51 | 45.0 | 3.77e-01 | 100.0% | 76.0% |
| 1ei5A03 | 2.40.128.50 | Mainly Beta › Beta Barrel › Lipocalin › | 0.51 | 45.0 | 4.45e-01 | 97.9% | 90.2% |
| 6k5mA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.50 | 44.0 | 3.94e-01 | 98.9% | 75.7% |
| 6wqbA02 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.50 | 44.0 | 3.92e-01 | 100.0% | 75.0% |
| 4zbgA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.50 | 41.0 | 3.55e-01 | 91.6% | 70.8% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3541529 | 883.1.1.15 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP+LBP_BPI_CETP_C | 0.60 | 53.0 | 3.46e-01 | 98.9% | 32.1% |
| 4403811 | 241.4.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Hypothetical protein c14orf129, hspc210 › Hypothetical protein c14orf129, hspc210 | 0.58 | 48.0 | 4.42e-01 | 87.4% | 80.0% |
| 3610189 | 883.1.1.0 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like | 0.57 | 50.0 | 3.99e-01 | 98.9% | 71.8% |
| 3789476 | 5.1.4.307 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF29630 | 0.56 | 43.0 | 2.85e-01 | 81.1% | 37.9% |
| 3175463 | 7026.1.1.5 ↗ | beta meanders › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 › ATG2_CAD | 0.55 | 40.0 | 3.14e-01 | 76.8% | 83.7% |
| 3632693 | 241.4.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Hypothetical protein c14orf129, hspc210 › Hypothetical protein c14orf129, hspc210 | 0.54 | 49.0 | 4.35e-01 | 98.9% | 93.3% |
| 3614586 | 214.1.1.0 ↗ | a+b two layers › SH2 › SH2 › SH2 | 0.54 | 45.0 | 4.21e-01 | 92.6% | 89.8% |
| 3349375 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.53 | 44.0 | 3.93e-01 | 98.9% | 63.7% |
| 4000243 | 883.1.1.2 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP_C | 0.53 | 47.0 | 3.43e-01 | 100.0% | 84.6% |
| 3584648 | 241.4.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › Hypothetical protein c14orf129, hspc210 › Hypothetical protein c14orf129, hspc210 › GSKIP_dom | 0.53 | 48.0 | 4.19e-01 | 98.9% | 90.7% |
| 3624708 | 227.1.1.4 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 | 0.51 | 37.0 | 3.28e-01 | 75.8% | 91.1% |
| 4066677 | 2.1.1.88 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CSD2 | 0.51 | 37.0 | 3.83e-01 | 91.6% | 81.1% |
| 3508261 | 883.1.1.0 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like | 0.51 | 45.0 | 3.43e-01 | 98.9% | 50.2% |