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gwe1_scaffold_7_prodigal-single.1__X__X__00262
Bact-Virgwe1_scaffold_7_prodigal-single.1__X__X__00262
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-161
Domain cluster:
rep: Filtrate_w_scaffold_1_prodigal-single.1__X__X__00433__D1-141_170-191
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4exrA01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.61 | 32.0 | 4.34e-01 | 86.9% | 100.0% |
| 1imuA00 | 3.30.160.100 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Ribosome hibernation promotion factor-like | 0.58 | 32.0 | 3.82e-01 | 95.6% | 79.4% |
| 4n6tA00 | 3.10.450.10 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 29.0 | 3.85e-01 | 76.9% | 100.0% |
| 3hi2B00 | 3.30.2310.40 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › | 0.55 | 33.0 | 4.09e-01 | 90.6% | 97.9% |
| 1e8oD00 | 3.30.720.10 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 | 0.54 | 22.0 | 3.08e-01 | 100.0% | 76.3% |
| 2v8qB00 | 6.20.250.60 | Special › Other non-globular › Double Stranded RNA Binding Domain › | 0.54 | 21.0 | 2.98e-01 | 78.1% | 74.0% |
| 2kieA00 | 2.30.29.110 | Mainly Beta › Roll › PH-domain like › | 0.53 | 33.0 | 3.76e-01 | 87.5% | 80.6% |
| 3hfqA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.50 | 38.0 | 3.01e-01 | 95.6% | 37.4% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3269232 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.59 | 31.0 | 4.13e-01 | 72.5% | 98.8% |
| 4966488 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.59 | 29.0 | 4.10e-01 | 71.9% | 100.0% |
| 4945471 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.59 | 26.0 | 3.70e-01 | 84.4% | 95.4% |
| 3606814 | 896.1.1.0 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related | 0.57 | 24.0 | 3.32e-01 | 98.1% | 78.2% |
| 137757 | 4312.1.1.9 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › MqsR_toxin | 0.55 | 33.0 | 4.09e-01 | 90.6% | 97.9% |
| 4968653 | 4312.1.1.15 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › DUF4258 | 0.54 | 33.0 | 4.10e-01 | 73.1% | 100.0% |
| 4992633 | 4312.1.1.15 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › DUF4258 | 0.54 | 27.0 | 3.72e-01 | 81.2% | 100.0% |
| 4613401 | 5.1.4.51 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › BNR_4 | 0.51 | 45.0 | 3.21e-01 | 96.2% | 38.9% |
| 4610518 | 5.1.5.201 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › PF30361 | 0.51 | 39.0 | 2.95e-01 | 93.8% | 33.6% |
| 3201338 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.51 | 43.0 | 3.81e-01 | 91.3% | 100.0% |
| 3874654 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.51 | 33.0 | 3.43e-01 | 81.2% | 69.3% |
| 3830762 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.50 | 29.0 | 3.60e-01 | 96.2% | 93.7% |