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gwe1_scaffold_7_prodigal-single.1__X__X__00337
Bact-Virgwe1_scaffold_7_prodigal-single.1__X__X__00337
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 34-100
Domain cluster:
rep: IMGVR_UViG_3300009688_000096-3300009688-Ga0116176_100046132__D150-240
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4v02C00 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.88 | 82.0 | 6.54e-01 | 100.0% | 86.9% |
| 1hf2A02 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.87 | 80.0 | 6.74e-01 | 98.5% | 95.3% |
| 1rwrA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.82 | 75.0 | 4.81e-01 | 100.0% | 40.4% |
| 4oj5C04 | 2.160.20.130 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.78 | 68.0 | 4.92e-01 | 97.0% | 57.8% |
| 4kh3A00 | 2.160.20.20 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.78 | 69.0 | 4.11e-01 | 100.0% | 16.9% |
| 5gkdA02 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.74 | 65.0 | 4.29e-01 | 100.0% | 43.2% |
| 5gkqB01 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.74 | 63.0 | 3.95e-01 | 100.0% | 28.6% |
| 4kxfP04 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.69 | 59.0 | 3.67e-01 | 100.0% | 27.2% |
| 3qmvB00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.67 | 58.0 | 3.99e-01 | 100.0% | 79.9% |
| 3vbiA01 | 2.160.10.10 | Mainly Beta › 3 Solenoid › UDP N-Acetylglucosamine Acyltransferase; domain 1 › Hexapeptide repeat proteins | 0.50 | 46.0 | 3.38e-01 | 100.0% | 63.2% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3707216 | 208.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Adhesin YadA, collagen-binding domain › Adhesin YadA, collagen-binding domain | 0.90 | 82.0 | 5.53e-01 | 100.0% | 30.0% |
| 3596944 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.89 | 81.0 | 6.04e-01 | 100.0% | 42.6% |
| 4496449 | 207.5.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Cell-division inhibitor MinC-C › Cell-division inhibitor MinC-C › MinC_C | 0.87 | 79.0 | 6.77e-01 | 98.5% | 92.2% |
| 3560250 | 208.2.1.7 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Adhesin YadA, collagen-binding domain › Adhesin YadA, collagen-binding domain › Epiglycanin_TR | 0.87 | 78.0 | 5.95e-01 | 100.0% | 45.5% |
| 4940774 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.86 | 80.0 | 6.77e-01 | 100.0% | 76.2% |
| 3945380 | 207.14.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A › Bactofilin | 0.86 | 79.0 | 6.81e-01 | 100.0% | 76.0% |
| 4493843 | 207.5.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Cell-division inhibitor MinC-C › Cell-division inhibitor MinC-C › MinC_C | 0.86 | 78.0 | 6.63e-01 | 98.5% | 99.0% |
| 4964741 | 207.14.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A › Bactofilin | 0.84 | 75.0 | 6.77e-01 | 98.5% | 85.6% |
| 3517885 | 207.14.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A | 0.83 | 76.0 | 5.47e-01 | 100.0% | 46.7% |
| 4020264 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.82 | 75.0 | 6.38e-01 | 100.0% | 74.3% |
| 4929387 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.80 | 68.0 | 6.73e-01 | 92.5% | 100.0% |
| 4024907 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.80 | 71.0 | 5.79e-01 | 100.0% | 68.0% |
| 3571723 | 207.4.1.5 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › C-CAP/cofactor C-like › C-CAP/cofactor C-like › PMG, Keratin_B2_2 | 0.79 | 71.0 | 5.48e-01 | 100.0% | 59.3% |
| 3546698 | 207.6.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C | 0.79 | 71.0 | 5.36e-01 | 100.0% | 58.7% |
| 3769689 | 207.14.1.3 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A › DUF5585 | 0.79 | 67.0 | 6.53e-01 | 100.0% | 85.3% |
| 4012012 | 207.4.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › C-CAP/cofactor C-like › C-CAP/cofactor C-like | 0.79 | 70.0 | 6.12e-01 | 100.0% | 86.0% |
| 5062061 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.78 | 69.0 | 4.69e-01 | 100.0% | 49.2% |
| 3572525 | 207.14.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A | 0.75 | 66.0 | 6.24e-01 | 100.0% | 83.7% |
| 3165270 | 207.2.1.10 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pertactin | 0.75 | 64.0 | 4.31e-01 | 98.5% | 32.3% |
| 3979669 | 207.8.1.2 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD,SufBD_N | 0.74 | 65.0 | 3.91e-01 | 100.0% | 27.0% |
| 5039608 | 207.14.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A | 0.74 | 60.0 | 5.95e-01 | 89.6% | 100.0% |
| 4983794 | 207.8.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD | 0.71 | 62.0 | 3.86e-01 | 100.0% | 30.4% |
| 5058805 | 207.8.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD | 0.71 | 59.0 | 3.57e-01 | 92.5% | 24.2% |
| 3803729 | 207.14.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A | 0.70 | 52.0 | 5.34e-01 | 98.5% | 86.2% |
| 3175357 | 207.6.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C | 0.68 | 59.0 | 4.66e-01 | 100.0% | 90.3% |
| 4976134 | 207.8.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD | 0.67 | 58.0 | 3.79e-01 | 100.0% | 66.0% |
| 3621708 | 207.9.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats | 0.65 | 57.0 | 4.26e-01 | 100.0% | 49.4% |
| 3915156 | 1160.1.1.0 ↗ | beta duplicates or obligate multimers › Endoglin orphan region (OR) domain › Endoglin orphan region (OR) domain › Endoglin orphan region (OR) domain | 0.56 | 48.0 | 3.87e-01 | 97.0% | 57.0% |
| 3870521 | 207.14.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A | 0.54 | 43.0 | 4.21e-01 | 89.6% | 98.7% |