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gwf1_scaffold_41_prodigal-single.1__X__X__00077
Bact-Virgwf1_scaffold_41_prodigal-single.1__X__X__00077
Identity
- Kingdom:
- phage
Quality
73.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 17-131
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF10263.16 best | SprT-like | 26.5 | 7.00e-06 | 97.4% | 84.1% |
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4jixB00 | 3.30.2010.10 | Alpha Beta › 2-Layer Sandwich › Zincin-like › "Metalloproteases (""zincins""), catalytic domain" | 0.80 | 58.0 | 6.05e-01 | 97.4% | 82.7% |
| 1k8rB00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.53 | 29.0 | 3.34e-01 | 97.4% | 73.2% |
| 2ek0A00 | 3.30.110.20 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain | 0.51 | 23.0 | 2.62e-01 | 77.4% | 54.4% |
| 2oqtD00 | 3.40.930.10 | Alpha Beta › 3-Layer(aba) Sandwich › Mannitol-specific EII; Chain A › Mannitol-specific EII; Chain A | 0.50 | 42.0 | 3.82e-01 | 99.1% | 67.9% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5055672 | 2498.1.1.39 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › SprT-like | 0.90 | 72.0 | 7.57e-01 | 99.1% | 90.5% |
| 4027214 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.85 | 57.0 | 6.57e-01 | 78.3% | 91.8% |
| 3839854 | 2498.1.1.17 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › YgjP-like | 0.84 | 60.0 | 4.90e-01 | 100.0% | 43.1% |
| 3390011 | 2498.1.1.39 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › SprT-like | 0.82 | 67.0 | 5.44e-01 | 100.0% | 47.6% |
| 3485197 | 2498.1.1.39 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › SprT-like | 0.79 | 73.0 | 6.43e-01 | 100.0% | 70.0% |
| 4969797 | 2498.1.1.39 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › SprT-like | 0.77 | 65.0 | 6.59e-01 | 100.0% | 89.6% |
| 3433202 | 221.1.1.159 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › DUF7138 | 0.56 | 26.0 | 3.46e-01 | 100.0% | 81.7% |
| 4990821 | 7571.1.1.1 ↗ | a/b three-layered sandwiches › Formyltransferase › Formyltransferase › Formyltransferase › Formyl_trans_N | 0.56 | 51.0 | 3.84e-01 | 100.0% | 88.4% |
| 3897557 | 311.1.1.2 ↗ | a+b three layers › Phoshotransferase/anion transport protein › Phoshotransferase/anion transport protein › Phoshotransferase/anion transport protein › Band_3_cyto | 0.53 | 41.0 | 4.10e-01 | 83.5% | 81.7% |
| 5071836 | 512.1.1.1 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st | 0.53 | 39.0 | 4.36e-01 | 79.1% | 97.8% |
| 316107 | 311.1.1.1 ↗ | a+b three layers › Phoshotransferase/anion transport protein › Phoshotransferase/anion transport protein › Phoshotransferase/anion transport protein › PTS_EIIA_2 | 0.50 | 42.0 | 3.82e-01 | 99.1% | 67.9% |
| 4984900 | 2011.2.1.7 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › PAC2 | 0.50 | 45.0 | 3.62e-01 | 100.0% | 87.4% |
D2
high
residues 150-245