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gwf1_scaffold_41_prodigal-single.1__X__X__00096
Bact-Virgwf1_scaffold_41_prodigal-single.1__X__X__00096
Identity
- Kingdom:
- phage
Quality
84.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-59
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4g6dB02 | 6.10.140.1800 | Special › Helix non-globular › Helix Hairpins › | 0.65 | 56.0 | 5.01e-01 | 100.0% | 76.5% |
| 2da3A01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.65 | 36.0 | 3.92e-01 | 87.5% | 66.0% |
| 2fzfA01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.62 | 49.0 | 3.57e-01 | 85.7% | 62.7% |
| 1z0pA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.62 | 46.0 | 4.16e-01 | 85.7% | 60.3% |
| 2da7A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.62 | 37.0 | 3.53e-01 | 75.0% | 46.5% |
| 2om6A02 | 1.10.150.400 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.60 | 49.0 | 4.38e-01 | 91.1% | 63.3% |
| 6ofuA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.60 | 52.0 | 3.38e-01 | 100.0% | 36.7% |
| 2cazC00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.59 | 44.0 | 4.20e-01 | 78.6% | 87.5% |
| 3ilkA02 | 1.10.8.590 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.58 | 43.0 | 4.09e-01 | 92.9% | 66.2% |
| 3s6jE02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.53 | 42.0 | 3.99e-01 | 91.1% | 98.6% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5007377 | 633.6.1.3 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › HpaB | 0.67 | 55.0 | 3.92e-01 | 92.9% | 78.9% |
| 5075806 | 4995.1.1.1 ↗ | alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like › B12-binding_2 | 0.63 | 47.0 | 4.22e-01 | 94.6% | 56.2% |
| 4120246 | 3664.1.1.1 ↗ | alpha arrays › Small, acid-soluble spore protein C › Small, acid-soluble spore protein C › Small, acid-soluble spore protein C › SASP | 0.63 | 50.0 | 5.10e-01 | 98.2% | 90.9% |
| 3970769 | 3921.1.1.0 ↗ | alpha complex topology › Na(+)-translocating NADH-quinone reductase subunit D › Na(+)-translocating NADH-quinone reductase subunit D › Na(+)-translocating NADH-quinone reductase subunit D | 0.60 | 52.0 | 3.60e-01 | 100.0% | 27.8% |
| 4926959 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.57 | 45.0 | 4.35e-01 | 87.5% | 76.9% |
| 3588172 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.55 | 48.0 | 3.57e-01 | 100.0% | 77.3% |
| 3295264 | 101.1.2.386 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_DRP | 0.53 | 42.0 | 3.69e-01 | 92.9% | 57.6% |