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gwf1_scaffold_41_prodigal-single.1__X__X__00153
Bact-Virgwf1_scaffold_41_prodigal-single.1__X__X__00153
Identity
- Kingdom:
- phage
Quality
81.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 35-115
Domain cluster:
representative
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7dd9A02 | 2.70.98.30 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 | 0.72 | 49.0 | 3.42e-01 | 70.4% | 43.2% |
| 5o46A00 | 3.10.450.10 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.72 | 53.0 | 4.72e-01 | 77.8% | 85.1% |
| 1y7uA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.71 | 50.0 | 3.91e-01 | 72.8% | 74.4% |
| 4bboA00 | 2.40.128.30 | Mainly Beta › Beta Barrel › Lipocalin › Avidin-like | 0.71 | 48.0 | 4.30e-01 | 70.4% | 78.8% |
| 2h36X00 | 3.30.160.300 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.70 | 48.0 | 4.32e-01 | 70.4% | 52.8% |
| 3djwA00 | 3.30.160.300 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.70 | 47.0 | 4.51e-01 | 70.4% | 61.1% |
| 1y7bA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.65 | 49.0 | 3.26e-01 | 80.2% | 32.6% |
| 7jvhC01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.65 | 49.0 | 3.24e-01 | 80.2% | 36.0% |
| 1jofA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.65 | 45.0 | 2.95e-01 | 72.8% | 28.8% |
| 4e1sA00 | 2.40.160.160 | Mainly Beta › Beta Barrel › Porin › Inverse autotransporter, beta-domain | 0.64 | 43.0 | 3.06e-01 | 70.4% | 58.7% |
| 4u6bA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.63 | 43.0 | 2.85e-01 | 71.6% | 22.7% |
| 6eugA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.63 | 45.0 | 2.95e-01 | 75.3% | 29.1% |
| 3h4zB03 | 3.15.10.50 | Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › | 0.63 | 52.0 | 3.95e-01 | 91.4% | 72.8% |
| 6mlyB01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.62 | 45.0 | 3.15e-01 | 75.3% | 33.2% |
| 5c0pA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.62 | 46.0 | 3.19e-01 | 79.0% | 26.1% |
| 3fbqA01 | 2.60.40.1630 | Mainly Beta › Sandwich › Immunoglobulin-like › bacillus anthracis domain | 0.62 | 44.0 | 3.69e-01 | 75.3% | 97.9% |
| 6eufA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.61 | 46.0 | 3.08e-01 | 79.0% | 33.4% |
| 3a9gA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.61 | 46.0 | 3.06e-01 | 80.2% | 28.4% |
| 3bbjA00 | 2.40.160.210 | Mainly Beta › Beta Barrel › Porin › Acyl-CoA thioesterase, double hotdog domain | 0.61 | 42.0 | 2.89e-01 | 70.4% | 56.2% |
| 3al9A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.61 | 47.0 | 2.94e-01 | 84.0% | 27.7% |
| 2gvhB02 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.59 | 43.0 | 3.80e-01 | 76.5% | 97.4% |
| 3nqhA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.59 | 42.0 | 2.86e-01 | 75.3% | 35.3% |
| 3rqbA00 | 2.40.160.210 | Mainly Beta › Beta Barrel › Porin › Acyl-CoA thioesterase, double hotdog domain | 0.58 | 42.0 | 2.94e-01 | 75.3% | 56.1% |
| 4az3A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.57 | 43.0 | 3.05e-01 | 81.5% | 44.0% |
| 1u17A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.55 | 38.0 | 2.91e-01 | 70.4% | 76.2% |
ECOD (43)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3959649 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.76 | 52.0 | 3.89e-01 | 70.4% | 57.9% |
| 5009702 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.76 | 52.0 | 4.26e-01 | 70.4% | 64.3% |
| 3359496 | 5.1.3.67 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 | 0.75 | 53.0 | 3.59e-01 | 72.8% | 32.0% |
| 3228525 | 241.15.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain | 0.75 | 51.0 | 4.58e-01 | 70.4% | 62.7% |
| 3892544 | 5.1.3.6 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1 | 0.73 | 49.0 | 3.24e-01 | 71.6% | 18.0% |
| 3670829 | 5.1.3.144 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › b-prop_At3g26010-like | 0.73 | 55.0 | 3.56e-01 | 79.0% | 26.7% |
| 3869486 | 5.1.4.13 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › FG-GAP | 0.72 | 50.0 | 3.20e-01 | 72.8% | 17.7% |
| 3780836 | 5.1.4.257 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › FG-GAP, FG-GAP_3 | 0.71 | 50.0 | 3.16e-01 | 72.8% | 16.8% |
| 3286246 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.71 | 49.0 | 4.51e-01 | 71.6% | 63.5% |
| 5062234 | 331.9.1.0 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain | 0.71 | 48.0 | 4.20e-01 | 70.4% | 52.5% |
| 5052595 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.70 | 49.0 | 3.01e-01 | 71.6% | 17.6% |
| 164598 | 331.15.1.1 ↗ | a+b two layers › TBP-like › Anti-CRISPR protein AcrID1 › Anti-CRISPR protein AcrID1 › DUF1374 | 0.70 | 48.0 | 4.32e-01 | 70.4% | 52.8% |
| 3401376 | 5.1.4.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH | 0.70 | 48.0 | 3.12e-01 | 71.6% | 17.4% |
| 3459291 | 5.1.3.68 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF1618 | 0.70 | 49.0 | 3.24e-01 | 72.8% | 24.6% |
| 3648232 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.70 | 50.0 | 3.27e-01 | 75.3% | 24.1% |
| 3598341 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.69 | 47.0 | 3.13e-01 | 71.6% | 18.2% |
| 3734383 | 5.1.11.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed | 0.68 | 49.0 | 3.18e-01 | 76.5% | 18.7% |
| 365513 | 331.15.1.1 ↗ | a+b two layers › TBP-like › Anti-CRISPR protein AcrID1 › Anti-CRISPR protein AcrID1 › DUF1374 | 0.68 | 48.0 | 4.45e-01 | 72.8% | 61.6% |
| None | — | 0.67 | 47.0 | 2.96e-01 | 72.8% | 17.0% | |
| 2474169 | 5.1.2.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_43 | 0.67 | 50.0 | 3.38e-01 | 80.2% | 31.2% |
| 5039153 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.67 | 49.0 | 3.16e-01 | 79.0% | 24.8% |
| 3392175 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.67 | 46.0 | 3.15e-01 | 70.4% | 28.1% |
| 1547989 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.65 | 49.0 | 3.22e-01 | 80.2% | 31.0% |
| 5054267 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.65 | 45.0 | 3.16e-01 | 71.6% | 28.2% |
| 3605476 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.65 | 46.0 | 2.95e-01 | 72.8% | 21.8% |
| 3707029 | 5.1.5.207 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_EIPR1 | 0.64 | 46.0 | 3.53e-01 | 75.3% | 45.4% |
| 3794471 | 5.1.3.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Arylesterase | 0.64 | 48.0 | 3.16e-01 | 80.2% | 31.0% |
| 3995515 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.64 | 47.0 | 3.19e-01 | 79.0% | 28.6% |
| 5062116 | 5.1.3.6 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1 | 0.63 | 44.0 | 3.06e-01 | 72.8% | 27.5% |
| 3321190 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.63 | 45.0 | 3.00e-01 | 75.3% | 27.0% |
| 3685544 | 5.1.5.77 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40, Beta-prop_WDR75_1st | 0.63 | 43.0 | 2.87e-01 | 71.6% | 21.2% |
| 3482199 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.62 | 46.0 | 2.87e-01 | 80.2% | 26.1% |
| 3904291 | 220.1.1.32 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Sec3-PIP2_bind | 0.62 | 44.0 | 3.28e-01 | 74.1% | 61.5% |
| 4237911 | 222.1.1.12 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PS-DH | 0.60 | 41.0 | 3.13e-01 | 70.4% | 88.3% |
| 4617681 | 222.1.1.8 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT_2 | 0.60 | 43.0 | 3.62e-01 | 76.5% | 89.3% |
| 3833006 | 5.1.3.67 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 | 0.57 | 39.0 | 2.67e-01 | 71.6% | 18.7% |
| 3793643 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.57 | 46.0 | 2.80e-01 | 87.7% | 16.6% |
| 3169693 | 5.1.4.80 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Utp8_b_propeller | 0.57 | 42.0 | 2.78e-01 | 80.2% | 28.3% |
| 3437088 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.56 | 43.0 | 3.30e-01 | 82.7% | 38.5% |
| 3881564 | 220.1.1.32 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Sec3-PIP2_bind | 0.56 | 48.0 | 3.80e-01 | 100.0% | 78.9% |
| 4961667 | 5084.1.1.45 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › PF26421 | 0.56 | 38.0 | 3.44e-01 | 71.6% | 53.0% |
| 3611189 | 222.1.1.10 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT_3 | 0.53 | 40.0 | 3.24e-01 | 84.0% | 81.2% |
| 3227200 | 243.1.1.75 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF26530 | 0.51 | 44.0 | 3.53e-01 | 100.0% | 80.6% |