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gwf1_scaffold_41_prodigal-single.1__X__X__00188
Bact-Virgwf1_scaffold_41_prodigal-single.1__X__X__00188
Identity
- Kingdom:
- phage
Quality
72.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-38
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4fxdA04 | 3.90.1600.10 | Alpha Beta › Alpha-Beta Complex › Palm domain of DNA polymerase › B family DNA polymerase, palm domain | 0.79 | 68.0 | 4.36e-01 | 100.0% | 26.1% |
| 1kl9A02 | 1.10.150.190 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Translation initiation factor 2; subunit 1; domain 2 | 0.74 | 59.0 | 4.43e-01 | 97.0% | 95.7% |
| 1m5iA00 | 1.10.287.450 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.74 | 58.0 | 4.27e-01 | 100.0% | 41.0% |
| 3lyuA01 | 3.40.50.80 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module | 0.72 | 62.0 | 4.29e-01 | 100.0% | 36.6% |
| 4djgB00 | 1.20.5.440 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › ATP synthase delta/epsilon subunit, C-terminal domain | 0.70 | 60.0 | 5.42e-01 | 100.0% | 83.0% |
| 3l9tA01 | 1.10.1240.70 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › | 0.53 | 47.0 | 3.60e-01 | 97.0% | 77.1% |
| 2k2aA00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.52 | 39.0 | 3.29e-01 | 93.9% | 44.3% |