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gwf1_scaffold_41_prodigal-single.1__X__X__00229
Bact-Virgwf1_scaffold_41_prodigal-single.1__X__X__00229
Identity
- Kingdom:
- phage
Quality
90.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-53
Domain cluster:
representative
D2
medium
residues 54-110
Domain cluster:
representative
CATH (34)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3rc3A05 | 1.20.58.1080 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.76 | 55.0 | 4.32e-01 | 75.4% | 42.5% |
| 1eteA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.74 | 54.0 | 4.09e-01 | 78.9% | 32.8% |
| 4q5qB00 | 1.20.1050.130 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.74 | 65.0 | 4.53e-01 | 100.0% | 42.6% |
| 2ra1A02 | 1.20.58.780 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.72 | 58.0 | 5.53e-01 | 89.5% | 98.5% |
| 2d2sA01 | 1.20.58.1210 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Exo84p, N-terminal helical domain | 0.72 | 60.0 | 4.82e-01 | 96.5% | 50.9% |
| 4w4kA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.71 | 48.0 | 4.27e-01 | 70.2% | 72.0% |
| 1sumB01 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.71 | 60.0 | 4.93e-01 | 96.5% | 79.4% |
| 1b48A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.70 | 62.0 | 5.03e-01 | 100.0% | 75.2% |
| 8a0rA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.70 | 60.0 | 4.67e-01 | 100.0% | 63.1% |
| 1yozA00 | 1.10.3200.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af0941 › AF0941-like | 0.70 | 61.0 | 4.82e-01 | 96.5% | 69.9% |
| 1yhuB00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.69 | 59.0 | 4.49e-01 | 100.0% | 65.3% |
| 8d7hD01 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.69 | 52.0 | 3.74e-01 | 84.2% | 38.2% |
| 8gr7A01 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.68 | 57.0 | 3.50e-01 | 91.2% | 34.6% |
| 1vcsA00 | 1.20.58.400 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins | 0.68 | 56.0 | 4.76e-01 | 96.5% | 81.4% |
| 3nynA03 | 1.10.167.10 | Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2 | 0.68 | 60.0 | 5.37e-01 | 100.0% | 70.4% |
| 2b7mA00 | 1.20.1280.170 | Mainly Alpha › Up-down Bundle › Monooxygenase › Exocyst complex component Exo70 | 0.68 | 58.0 | 3.38e-01 | 100.0% | 22.2% |
| 1iurA01 | 1.10.287.110 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain | 0.68 | 53.0 | 5.22e-01 | 87.7% | 90.5% |
| 4lctB00 | 1.25.40.570 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.68 | 58.0 | 3.53e-01 | 94.7% | 20.4% |
| 2fji101 | 1.10.357.50 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › | 0.67 | 57.0 | 3.95e-01 | 100.0% | 57.9% |
| 2if4A02 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.67 | 56.0 | 4.42e-01 | 100.0% | 64.7% |
| 4qmhA00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.66 | 57.0 | 3.83e-01 | 100.0% | 30.5% |
| 4egwA02 | 1.20.58.340 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region | 0.65 | 52.0 | 4.28e-01 | 96.5% | 82.4% |
| 2hz8A00 | 1.20.120.660 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › IL-4 antagonist (De novo design) like domain | 0.64 | 54.0 | 4.42e-01 | 100.0% | 67.8% |
| 2pkeA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.63 | 43.0 | 3.86e-01 | 70.2% | 94.9% |
| 8gpsA01 | 1.25.60.10 | Mainly Alpha › Alpha Horseshoe › MgtE N-terminal fold › MgtE N-terminal domain-like | 0.63 | 46.0 | 3.82e-01 | 100.0% | 43.8% |
| 3fflA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.63 | 47.0 | 3.80e-01 | 98.2% | 38.9% |
| 1kf6A03 | 1.20.58.100 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain | 0.62 | 52.0 | 4.18e-01 | 96.5% | 60.0% |
| 3m0fB02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.61 | 50.0 | 4.11e-01 | 100.0% | 66.7% |
| 1wfdA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.61 | 49.0 | 4.31e-01 | 94.7% | 66.7% |
| 2ptfB02 | 1.20.58.290 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hypothetical membrane protein ta0354_69_121. | 0.61 | 50.0 | 5.07e-01 | 96.5% | 96.5% |
| 1dj8A00 | 1.10.890.10 | Mainly Alpha › Orthogonal Bundle › 10k-s Protein, Hypothetical Protein A; Chain A › HNS-dependent expression A | 0.60 | 47.0 | 4.28e-01 | 87.7% | 93.7% |
| 1gxmB00 | 1.50.10.20 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.59 | 50.0 | 3.16e-01 | 100.0% | 37.0% |
| 3keyA01 | 1.10.10.1080 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Stn1, N-terminal wHTH domain | 0.56 | 43.0 | 3.75e-01 | 84.2% | 95.4% |
| 3nkyA03 | 1.20.960.20 | Mainly Alpha › Up-down Bundle › Mitochondrial Import Receptor Subunit Tom20; Chain A › | 0.54 | 40.0 | 3.80e-01 | 87.7% | 69.9% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3424395 | 109.4.1.95 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_2 | 0.75 | 54.0 | 4.37e-01 | 100.0% | 40.0% |
| 3237495 | 109.4.1.1754 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › mTOR_dom, TPR_IMB1 | 0.73 | 63.0 | 3.38e-01 | 100.0% | 5.6% |
| 3386136 | 650.1.1.1 ↗ | alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ | 0.73 | 49.0 | 4.47e-01 | 70.2% | 54.7% |
| 3997012 | 604.30.1.1 ↗ | alpha bundles › Spectrin repeat-like › Gamma-secretase subunit PEN-2 › Gamma-secretase subunit PEN-2 › PEN-2 | 0.67 | 58.0 | 4.93e-01 | 98.2% | 60.0% |
| 4373664 | 574.1.1.0 ↗ | alpha bundles › Surp module (SWAP domain) › Surp module (SWAP domain) › Surp module (SWAP domain) | 0.66 | 54.0 | 4.68e-01 | 98.2% | 57.0% |
| 3409131 | 3930.1.1.0 ↗ | alpha bundles › Helical bundle insertion in helicase domains › Helical bundle in Hef helicase › Helical bundle in Hef helicase | 0.66 | 56.0 | 4.07e-01 | 96.5% | 40.0% |
| 3197582 | 109.4.1.142 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CSN8_PSD8_EIF3K | 0.65 | 54.0 | 3.48e-01 | 100.0% | 29.0% |
| 3656890 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.65 | 55.0 | 4.78e-01 | 100.0% | 69.5% |
| 3325925 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.65 | 55.0 | 3.44e-01 | 100.0% | 22.6% |
| 3467843 | 3930.1.1.0 ↗ | alpha bundles › Helical bundle insertion in helicase domains › Helical bundle in Hef helicase › Helical bundle in Hef helicase | 0.64 | 56.0 | 4.34e-01 | 100.0% | 49.2% |
| 3655933 | 604.12.1.2 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › Vta1 | 0.64 | 55.0 | 4.65e-01 | 100.0% | 58.0% |
| 3926402 | 639.2.1.0 ↗ | alpha arrays › HHA-like › Regulator of acid resistance influenced by indole (AriR) › Regulator of acid resistance influenced by indole (AriR) | 0.63 | 44.0 | 4.01e-01 | 75.4% | 58.7% |
| 3931225 | 106.1.1.1 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like › Globin | 0.63 | 53.0 | 3.91e-01 | 100.0% | 57.1% |
| 3496390 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.62 | 51.0 | 3.45e-01 | 98.2% | 24.4% |
| 3954422 | 633.5.1.0 ↗ | alpha bundles › Bromodomain-like › LemA-like › LemA-like | 0.61 | 51.0 | 3.92e-01 | 98.2% | 73.1% |
| 3936950 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.61 | 52.0 | 4.42e-01 | 100.0% | 84.0% |
| 3331975 | 3930.1.1.0 ↗ | alpha bundles › Helical bundle insertion in helicase domains › Helical bundle in Hef helicase › Helical bundle in Hef helicase | 0.59 | 49.0 | 3.90e-01 | 96.5% | 48.8% |
| 4890285 | 109.4.1.1283 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT, HEAT_PBS, HEAT_2 | 0.59 | 48.0 | 4.53e-01 | 93.0% | 81.7% |
| 3699725 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.59 | 48.0 | 3.67e-01 | 100.0% | 51.0% |
| 4660983 | 138.1.1.0 ↗ | alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain | 0.50 | 39.0 | 3.29e-01 | 96.5% | 88.3% |