←Back to structures
gwf1_scaffold_41_prodigal-single.1__X__X__00241
Bact-Virgwf1_scaffold_41_prodigal-single.1__X__X__00241
Identity
- Kingdom:
- phage
Quality
63.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 33-131
Domain cluster:
representative
CATH (36)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ldkA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.65 | 51.0 | 4.23e-01 | 83.8% | 73.3% |
| 1xuvA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.63 | 51.0 | 4.27e-01 | 85.9% | 76.7% |
| 1avgI00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.63 | 46.0 | 4.11e-01 | 77.8% | 70.4% |
| 1z94B00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.61 | 48.0 | 4.27e-01 | 83.8% | 79.7% |
| 2l9pA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.60 | 48.0 | 4.08e-01 | 85.9% | 79.3% |
| 3pu2B00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.60 | 48.0 | 4.17e-01 | 85.9% | 80.4% |
| 2retA00 | 3.30.1300.30 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like | 0.60 | 42.0 | 4.45e-01 | 72.7% | 90.5% |
| 3eliA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.60 | 47.0 | 4.17e-01 | 83.8% | 79.2% |
| 7wa9A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.60 | 46.0 | 4.07e-01 | 80.8% | 75.9% |
| 3q63F00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.59 | 47.0 | 4.17e-01 | 83.8% | 74.1% |
| 1aqbA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.59 | 49.0 | 4.11e-01 | 92.9% | 56.0% |
| 6v04A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.59 | 46.0 | 4.24e-01 | 83.8% | 77.2% |
| 4xrtA02 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.58 | 46.0 | 3.94e-01 | 83.8% | 68.8% |
| 3otlA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.58 | 46.0 | 3.98e-01 | 83.8% | 74.5% |
| 2il5A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.58 | 46.0 | 3.91e-01 | 83.8% | 67.9% |
| 1x53A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.58 | 46.0 | 4.18e-01 | 83.8% | 74.8% |
| 3ni8A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.58 | 46.0 | 4.06e-01 | 83.8% | 72.1% |
| 1xfsA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.58 | 46.0 | 4.00e-01 | 85.9% | 77.3% |
| 5h9kA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.57 | 49.0 | 4.22e-01 | 92.9% | 76.6% |
| 2m89A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.57 | 45.0 | 4.10e-01 | 83.8% | 76.1% |
| 3ijtB00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.57 | 45.0 | 3.96e-01 | 83.8% | 72.7% |
| 1uzxA00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.56 | 39.0 | 3.51e-01 | 71.7% | 74.3% |
| 1lf7A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.56 | 46.0 | 3.95e-01 | 91.9% | 66.5% |
| 2leqA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.56 | 47.0 | 4.10e-01 | 90.9% | 84.9% |
| 2m47A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.55 | 43.0 | 3.65e-01 | 82.8% | 74.2% |
| 3qkgA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.55 | 46.0 | 3.95e-01 | 92.9% | 75.0% |
| 4q8gA00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.55 | 41.0 | 2.77e-01 | 76.8% | 92.7% |
| 7fisA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.55 | 41.0 | 2.96e-01 | 79.8% | 45.8% |
| 2hzrA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.55 | 45.0 | 3.94e-01 | 92.9% | 72.7% |
| 4h75A00 | 2.80.10.70 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › Spindlin/Ssty | 0.54 | 41.0 | 3.29e-01 | 81.8% | 85.9% |
| 4qrlA00 | 2.40.128.280 | Mainly Beta › Beta Barrel › Lipocalin › | 0.52 | 42.0 | 4.09e-01 | 88.9% | 85.5% |
| 6x6aA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.52 | 38.0 | 2.78e-01 | 76.8% | 91.5% |
| 5ay6A01 | 2.60.98.20 | Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Flagellar hook protein FlgE | 0.51 | 45.0 | 3.80e-01 | 100.0% | 77.8% |
| 1cbiA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.51 | 41.0 | 3.77e-01 | 89.9% | 86.0% |
| 6canA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 37.0 | 2.72e-01 | 78.8% | 81.8% |
| 3oh8A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.50 | 41.0 | 3.72e-01 | 91.9% | 69.3% |
ECOD (26)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3784140 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 32.0 | 4.19e-01 | 74.7% | 76.4% |
| 143630 | 331.3.1.9 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 | 0.65 | 51.0 | 4.30e-01 | 83.8% | 76.8% |
| 5075975 | 331.3.1.9 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 | 0.63 | 50.0 | 4.14e-01 | 83.8% | 72.4% |
| 6317 | 331.3.1.9 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 | 0.63 | 51.0 | 4.27e-01 | 85.9% | 76.7% |
| 3958954 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.63 | 49.0 | 4.16e-01 | 82.8% | 72.5% |
| 4965742 | 331.3.1.11 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 | 0.63 | 49.0 | 4.26e-01 | 82.8% | 72.0% |
| 4927548 | 331.3.1.9 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 | 0.63 | 47.0 | 4.39e-01 | 77.8% | 67.5% |
| 828 | 9.1.1.5 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Triabin | 0.63 | 46.0 | 4.11e-01 | 77.8% | 70.4% |
| 3389477 | 4205.1.1.0 ↗ | a+b two layers › SMI1/KNR4-like › SMI1/KNR4-like › SMI1/KNR4-like | 0.61 | 45.0 | 3.62e-01 | 76.8% | 50.5% |
| 4032043 | 331.3.1.9 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 | 0.60 | 48.0 | 4.00e-01 | 83.8% | 67.9% |
| 408353 | 331.3.1.9 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 | 0.60 | 48.0 | 4.17e-01 | 85.9% | 80.9% |
| 3484999 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.60 | 47.0 | 4.09e-01 | 83.8% | 73.8% |
| 5045702 | 2003.1.5.81 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 | 0.59 | 41.0 | 3.06e-01 | 71.7% | 83.2% |
| 5076458 | 331.3.1.9 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 | 0.58 | 46.0 | 4.10e-01 | 83.8% | 72.1% |
| 1828798 | 9.1.1.5 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Triabin | 0.58 | 50.0 | 4.27e-01 | 92.9% | 75.6% |
| 408891 | 331.3.1.9 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 | 0.58 | 46.0 | 3.95e-01 | 83.8% | 73.5% |
| 5004059 | 331.3.1.11 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 | 0.58 | 45.0 | 3.99e-01 | 82.8% | 75.2% |
| 4929336 | 331.3.1.11 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 | 0.58 | 45.0 | 3.89e-01 | 82.8% | 69.7% |
| 6316 | 331.3.1.9 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 | 0.58 | 46.0 | 4.00e-01 | 85.9% | 77.3% |
| 3280054 | 331.3.1.11 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 | 0.58 | 45.0 | 3.91e-01 | 83.8% | 71.2% |
| 5059491 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.56 | 41.0 | 3.19e-01 | 74.7% | 37.0% |
| None | — | 0.56 | 47.0 | 3.98e-01 | 92.9% | 88.2% | |
| 3866571 | 4.1.1.34 ↗ | beta barrels › SH3 › SH3 › SH3 › MBT | 0.54 | 41.0 | 2.72e-01 | 82.8% | 90.6% |
| 3954692 | 9.4.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › D-aminopeptidase, middle and C-terminal domains › D-aminopeptidase, middle and C-terminal domains | 0.53 | 37.0 | 3.70e-01 | 75.8% | 69.5% |
| 3861569 | 220.1.1.56 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › ASK_PH | 0.53 | 38.0 | 3.67e-01 | 76.8% | 93.0% |
| 177767 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.50 | 41.0 | 3.77e-01 | 91.9% | 72.4% |