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gwf1_scaffold_41_prodigal-single.1__X__X__00264
Bact-Virgwf1_scaffold_41_prodigal-single.1__X__X__00264
Identity
- Kingdom:
- phage
Quality
87.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-81
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3aeiA00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.65 | 50.0 | 4.78e-01 | 83.5% | 76.6% |
| 2zdiB00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.64 | 50.0 | 4.54e-01 | 83.5% | 67.9% |
| 4w4kA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.61 | 48.0 | 4.78e-01 | 83.5% | 85.4% |
| 1fxkB00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.60 | 47.0 | 4.24e-01 | 83.5% | 73.4% |
| 6x6nA01 | 1.20.120.260 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Virulence factor YopE uncharacterised domain | 0.58 | 40.0 | 3.50e-01 | 75.9% | 47.9% |
| 3r4iA02 | 6.10.140.960 | Special › Helix non-globular › Helix Hairpins › | 0.56 | 35.0 | 3.92e-01 | 84.8% | 83.3% |
| 1yirA00 | 3.20.140.10 | Alpha Beta › Alpha-Beta Barrel › nicotinate phosphoribosyltransferase › nicotinate phosphoribosyltransferase | 0.54 | 38.0 | 2.47e-01 | 74.7% | 35.9% |
| 1lnwF01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 42.0 | 3.62e-01 | 84.8% | 74.2% |
| 1aroP03 | 3.30.70.370 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 37.0 | 3.02e-01 | 73.4% | 44.0% |
| 3gr5A02 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.52 | 32.0 | 3.50e-01 | 78.5% | 73.5% |
| 1go4A00 | 3.30.900.10 | Alpha Beta › 2-Layer Sandwich › Cell Cycle, Spindle Assembly Checkpoint Protein; Chain A › HORMA domain | 0.52 | 40.0 | 2.95e-01 | 81.0% | 52.0% |
| 2fsjA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.51 | 35.0 | 2.98e-01 | 72.2% | 56.5% |
| 3gwiA00 | 3.40.1110.10 | Alpha Beta › 3-Layer(aba) Sandwich › Calcium-transporting ATPase, cytoplasmic domain N › Calcium-transporting ATPase, cytoplasmic domain N | 0.50 | 37.0 | 2.99e-01 | 79.7% | 98.8% |
ECOD (70)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3169399 | 4099.1.1.11 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Med14 | 0.72 | 42.0 | 3.70e-01 | 75.9% | 40.9% |
| 3628456 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.67 | 52.0 | 4.42e-01 | 83.5% | 57.8% |
| 3413217 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.65 | 51.0 | 4.52e-01 | 83.5% | 69.6% |
| 4028685 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.65 | 51.0 | 4.56e-01 | 83.5% | 72.7% |
| 139279 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.65 | 50.0 | 4.78e-01 | 83.5% | 76.6% |
| 3637098 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.65 | 51.0 | 4.28e-01 | 83.5% | 54.1% |
| 4381440 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.65 | 51.0 | 4.48e-01 | 83.5% | 62.6% |
| 3614763 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.65 | 50.0 | 4.38e-01 | 83.5% | 58.3% |
| 1000517 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.64 | 50.0 | 4.61e-01 | 83.5% | 71.3% |
| 4887090 | 3834.1.1.1 ↗ | alpha bundles › TcA alpha pore-forming domain › TcA alpha pore-forming domain › TcA alpha pore-forming domain › TcA_TcB_BD | 0.64 | 50.0 | 3.21e-01 | 83.5% | 30.8% |
| 4977598 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.63 | 49.0 | 4.43e-01 | 83.5% | 65.5% |
| 4112182 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.63 | 50.0 | 4.33e-01 | 83.5% | 61.0% |
| 4259368 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.63 | 49.0 | 4.29e-01 | 83.5% | 60.0% |
| 4666900 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.63 | 50.0 | 4.23e-01 | 83.5% | 57.6% |
| 3493963 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.63 | 50.0 | 4.59e-01 | 83.5% | 71.0% |
| 3254236 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.62 | 48.0 | 4.43e-01 | 83.5% | 74.3% |
| 4681355 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.62 | 49.0 | 4.26e-01 | 83.5% | 60.0% |
| 3485296 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.62 | 49.0 | 4.44e-01 | 83.5% | 69.5% |
| 3550136 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.62 | 49.0 | 4.28e-01 | 83.5% | 69.6% |
| 5062471 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.62 | 50.0 | 4.51e-01 | 88.6% | 64.5% |
| 4995244 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.62 | 48.0 | 4.31e-01 | 83.5% | 64.5% |
| 3369452 | 310.2.1.38 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › Hobbit | 0.62 | 45.0 | 4.34e-01 | 77.2% | 85.6% |
| 4181293 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.62 | 49.0 | 4.34e-01 | 83.5% | 65.5% |
| 4457710 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.62 | 50.0 | 4.26e-01 | 84.8% | 90.8% |
| 3593339 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.62 | 49.0 | 4.27e-01 | 83.5% | 69.6% |
| 3690513 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.61 | 48.0 | 4.03e-01 | 83.5% | 54.1% |
| 5020161 | 601.1.2.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) | 0.61 | 50.0 | 3.95e-01 | 88.6% | 85.4% |
| 3270487 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.61 | 48.0 | 4.30e-01 | 83.5% | 65.5% |
| 3712081 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.61 | 49.0 | 4.32e-01 | 83.5% | 72.7% |
| 3228583 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.61 | 48.0 | 4.25e-01 | 83.5% | 69.6% |
| 3482328 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.61 | 47.0 | 4.33e-01 | 83.5% | 69.5% |
| 4017372 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.61 | 48.0 | 4.22e-01 | 83.5% | 69.6% |
| 3937187 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.61 | 47.0 | 4.29e-01 | 84.8% | 67.3% |
| 5029669 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.61 | 50.0 | 4.27e-01 | 87.3% | 90.0% |
| 3935332 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.61 | 48.0 | 4.02e-01 | 83.5% | 61.5% |
| 3786162 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.61 | 47.0 | 4.45e-01 | 83.5% | 72.6% |
| 5078448 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.60 | 47.0 | 4.24e-01 | 83.5% | 65.5% |
| 3202986 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.60 | 48.0 | 4.03e-01 | 83.5% | 75.2% |
| 3948609 | 7011.1.1.1 ↗ | alpha bundles › RodA transmembrane domain › RodA transmembrane domain › RodA transmembrane domain › FTSW_RODA_SPOVE | 0.60 | 50.0 | 3.23e-01 | 91.1% | 81.6% |
| 3828336 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.60 | 47.0 | 4.18e-01 | 83.5% | 63.2% |
| 3579472 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.60 | 47.0 | 3.97e-01 | 83.5% | 56.2% |
| 3859550 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.60 | 48.0 | 4.12e-01 | 84.8% | 79.2% |
| 3781291 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.60 | 46.0 | 4.31e-01 | 83.5% | 77.0% |
| 4981980 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.60 | 46.0 | 4.10e-01 | 83.5% | 58.3% |
| 3234976 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.59 | 47.0 | 4.16e-01 | 83.5% | 66.4% |
| 3265214 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.58 | 46.0 | 4.00e-01 | 83.5% | 87.0% |
| 3512585 | 5010.1.1.5 ↗ | extended segments › Bacterial aa3 type cytochrome c oxidase subunit IV › Bacterial aa3 type cytochrome c oxidase subunit IV › Bacterial aa3 type cytochrome c oxidase subunit IV › TraD_N | 0.58 | 46.0 | 4.03e-01 | 84.8% | 69.6% |
| 3942067 | 4120.1.1.44 ↗ | few secondary structure elements › Tim10/DDP › Tim10/DDP › Tim10/DDP › TraD_N | 0.58 | 46.0 | 4.09e-01 | 84.8% | 72.7% |
| 4991135 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.57 | 45.0 | 4.07e-01 | 83.5% | 80.0% |
| 4025452 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.57 | 45.0 | 3.94e-01 | 83.5% | 87.0% |
| 3179505 | 633.23.1.22 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › MARVEL | 0.57 | 46.0 | 3.68e-01 | 87.3% | 50.3% |
| 3406351 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.57 | 47.0 | 4.16e-01 | 88.6% | 72.7% |
| 3675304 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.57 | 46.0 | 4.00e-01 | 88.6% | 70.0% |
| 3890459 | 101.21.1.1 ↗ | alpha arrays › HTH › HTH domain in DNA topoisomerase IV alpha subunit › HTH domain in DNA topoisomerase IV alpha subunit › TP6A_N | 0.56 | 41.0 | 3.51e-01 | 77.2% | 66.2% |
| 3998932 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.56 | 48.0 | 3.77e-01 | 94.9% | 72.9% |
| 5031480 | 283.1.1.1 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase › Peptidase_M24 | 0.56 | 39.0 | 2.74e-01 | 72.2% | 37.3% |
| 4027404 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.56 | 46.0 | 4.30e-01 | 88.6% | 73.7% |
| 5035493 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.55 | 48.0 | 4.33e-01 | 92.4% | 97.1% |
| 4271212 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.55 | 45.0 | 3.89e-01 | 88.6% | 65.0% |
| 4025349 | 3567.1.1.0 ↗ | a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer | 0.55 | 47.0 | 3.95e-01 | 92.4% | 60.0% |
| 4224821 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.55 | 47.0 | 4.13e-01 | 92.4% | 88.7% |
| 3761667 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.55 | 45.0 | 4.57e-01 | 89.9% | 88.7% |
| 3506058 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.55 | 43.0 | 4.02e-01 | 87.3% | 78.0% |
| 3808578 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.54 | 47.0 | 4.88e-01 | 96.2% | 100.0% |
| 4188007 | 7011.1.1.1 ↗ | alpha bundles › RodA transmembrane domain › RodA transmembrane domain › RodA transmembrane domain › FTSW_RODA_SPOVE | 0.54 | 47.0 | 3.06e-01 | 94.9% | 65.0% |
| 4978597 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.53 | 48.0 | 3.64e-01 | 100.0% | 95.7% |
| 60305 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.53 | 46.0 | 4.13e-01 | 92.4% | 69.8% |
| 4650319 | 7011.1.1.1 ↗ | alpha bundles › RodA transmembrane domain › RodA transmembrane domain › RodA transmembrane domain › FTSW_RODA_SPOVE | 0.52 | 45.0 | 2.91e-01 | 94.9% | 66.3% |
| 3946654 | 517.2.1.0 ↗ | beta barrels › CBF-like › TraF › TraF | 0.52 | 43.0 | 2.95e-01 | 92.4% | 25.8% |
| 3228514 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.50 | 36.0 | 2.92e-01 | 78.5% | 56.5% |