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gwf1_scaffold_41_prodigal-single.1__X__X__00331
Bact-Virgwf1_scaffold_41_prodigal-single.1__X__X__00331
Identity
- Kingdom:
- phage
Quality
75.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 27-111
Domain cluster:
representative
CATH (27)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wy6A00 | 1.25.40.350 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.62 | 47.0 | 3.89e-01 | 92.9% | 44.0% |
| 1vi0A02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.62 | 46.0 | 3.88e-01 | 80.0% | 77.9% |
| 7y4rB01 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.62 | 47.0 | 4.34e-01 | 80.0% | 72.6% |
| 1mqsA04 | 1.25.40.60 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.60 | 50.0 | 4.73e-01 | 96.5% | 77.7% |
| 4hdoA02 | 1.20.80.10 | Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › | 0.58 | 50.0 | 4.52e-01 | 96.5% | 74.8% |
| 3qfeB00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.57 | 47.0 | 3.25e-01 | 95.3% | 26.2% |
| 2iw3A02 | 1.20.1390.20 | Mainly Alpha › Up-down Bundle › PWI domain › | 0.55 | 45.0 | 4.42e-01 | 100.0% | 82.2% |
| 2w53B00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.55 | 43.0 | 3.48e-01 | 85.9% | 66.5% |
| 3cprA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.55 | 46.0 | 3.18e-01 | 96.5% | 26.2% |
| 3rjtA00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.55 | 48.0 | 3.64e-01 | 100.0% | 90.2% |
| 1dk5A04 | 1.10.220.10 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin | 0.55 | 40.0 | 4.39e-01 | 78.8% | 100.0% |
| 7zcvA02 | 1.25.40.400 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.55 | 47.0 | 3.61e-01 | 100.0% | 94.3% |
| 4xvxA01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.55 | 42.0 | 3.93e-01 | 85.9% | 82.0% |
| 1rz4A01 | 1.25.40.250 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › ARM repeat; domain 1 | 0.54 | 43.0 | 3.93e-01 | 97.6% | 63.3% |
| 1lt7B00 | 3.20.20.330 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Homocysteine-binding-like domain | 0.54 | 43.0 | 2.99e-01 | 96.5% | 24.1% |
| 2khmA01 | 1.10.10.1350 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Spidroin domain, C-terminal domain | 0.54 | 42.0 | 3.96e-01 | 85.9% | 86.1% |
| 4uhiA01 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.54 | 40.0 | 2.60e-01 | 80.0% | 77.8% |
| 2e2eA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.53 | 47.0 | 3.88e-01 | 98.8% | 67.5% |
| 2jqqA00 | 1.20.58.1240 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.52 | 41.0 | 3.43e-01 | 85.9% | 63.6% |
| 2katA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.52 | 41.0 | 3.84e-01 | 97.6% | 67.0% |
| 3k2jA00 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.52 | 37.0 | 3.30e-01 | 84.7% | 52.9% |
| 1bucA01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.52 | 40.0 | 3.60e-01 | 85.9% | 81.3% |
| 2ibdA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.51 | 40.0 | 3.43e-01 | 85.9% | 83.7% |
| 1cy5A00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.51 | 36.0 | 3.58e-01 | 85.9% | 69.6% |
| 1aepA00 | 1.20.120.20 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein | 0.50 | 36.0 | 2.98e-01 | 74.1% | 51.0% |
| 6za2B01 | 3.40.50.10390 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Gingipain r; domain 1 | 0.50 | 41.0 | 3.43e-01 | 91.8% | 88.4% |
| 2e8gA01 | 1.20.1440.150 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.50 | 36.0 | 3.22e-01 | 76.5% | 71.0% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3340542 | 176.1.1.1 ↗ | alpha arrays › Annexin › Annexin › Annexin › Annexin | 0.61 | 46.0 | 4.64e-01 | 81.2% | 91.8% |
| 3218481 | 109.4.1.369 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SNAPC1 | 0.58 | 50.0 | 4.26e-01 | 98.8% | 99.3% |
| 3302418 | 109.27.1.3 ↗ | alpha superhelices › Repetitive alpha hairpins › BACK domain › BACK domain › NPH3 | 0.56 | 46.0 | 4.66e-01 | 100.0% | 91.8% |
| 3696748 | 5050.1.1.1 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Sugar_tr | 0.56 | 43.0 | 3.01e-01 | 81.2% | 52.6% |
| 3786069 | 604.12.1.56 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › ASTER | 0.55 | 39.0 | 4.25e-01 | 75.3% | 95.7% |
| 3690888 | 604.3.1.0 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain | 0.54 | 37.0 | 3.64e-01 | 71.8% | 81.1% |
| 2323994 | 604.37.1.0 ↗ | alpha bundles › Spectrin repeat-like › Legionella effector Lem22 › Legionella effector Lem22 | 0.54 | 39.0 | 3.86e-01 | 76.5% | 88.9% |
| 3680320 | 5000.3.1.0 ↗ | alpha arrays › Toxins' membrane translocation domains › Bcl-2 inhibitors of programmed cell death › Bcl-2 inhibitors of programmed cell death | 0.53 | 41.0 | 3.46e-01 | 84.7% | 59.3% |
| 3593366 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.53 | 39.0 | 3.01e-01 | 76.5% | 69.7% |
| 3415493 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.51 | 41.0 | 3.73e-01 | 90.6% | 87.5% |
| 3721800 | 109.40.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › DNA polymerase alpha-binding protein Ctf4 C-terminal domain › DNA polymerase alpha-binding protein Ctf4 C-terminal domain › Hira | 0.51 | 44.0 | 3.82e-01 | 96.5% | 83.1% |
| 4976177 | 109.4.1.124 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DNA_alkylation | 0.50 | 44.0 | 3.69e-01 | 98.8% | 68.7% |